1 files changed, 0 insertions, 40 deletions
diff --git a/sci-biology/tophat/tophat-2.0.8.ebuild b/sci-biology/tophat/tophat-2.0.8.ebuild
deleted file mode 100644
index 4a99dfdd784f..000000000000
--- a/sci-biology/tophat/tophat-2.0.8.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-AUTOTOOLS_AUTORECONF=yes
-
-inherit autotools-utils
-
-DESCRIPTION="A fast splice junction mapper for RNA-Seq reads"
-HOMEPAGE="http://tophat.cbcb.umd.edu/"
-SRC_URI="http://tophat.cbcb.umd.edu/downloads/${P}.tar.gz"
-
-LICENSE="Artistic"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="debug"
-
-DEPEND="
-	dev-libs/boost
-	sci-biology/samtools
-	~sci-biology/seqan-1.3.1"
-RDEPEND="${DEPEND}
-	sci-biology/bowtie"
-
-PATCHES=( "${FILESDIR}"/${P}-flags.patch )
-
-src_prepare() {
-	rm -rf src/SeqAn* || die
-	autotools-utils_src_prepare
-}
-
-src_configure() {
-	local myeconfargs=(
-		--disable-optim
-		$(use_enable debug)
-	)
-	autotools-utils_src_configure
-}