diff options
Diffstat (limited to 'sci-biology/paml')
| -rw-r--r-- | sci-biology/paml/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/paml/paml-4.4c-r1.ebuild | 47 |
2 files changed, 0 insertions, 48 deletions
diff --git a/sci-biology/paml/Manifest b/sci-biology/paml/Manifest index e0bf2de61716..87d673016fbe 100644 --- a/sci-biology/paml/Manifest +++ b/sci-biology/paml/Manifest @@ -1,2 +1 @@ -DIST paml4.4c.tar.gz 2891715 BLAKE2B 04449b80e4fec080eabb69108d399a32278fcc79221e3c0d087ad1d978517ae2655bce8c300260dfb99d4d60700369ec338fa71c1d48f41a82017dbd3cae2397 SHA512 6a5f6d5baa91afa924ea392b76e59db6691fa9d6ee13a248dfe6e46d3fc83178ce41c2991de1c4cdb21952ee53771298aa0c62060f47d0dd84eaa76eb533498a DIST paml4.9j.tgz 6380272 BLAKE2B 58fc40904aff6ae539613e772fc0525b557c1e72c1a7a1d95176987bafed8771624ae6c53803bc71c5821a52de8212a49ad99c02c408870ec929c15b6bf217e0 SHA512 c5f3c42409bbaf5ac67c816a245f1d3175ee449dcf10232d9de539130341f80f85ae53518cbca549b1f42ddf64a6e8140a22b9da091d458b425512f11f8c1758 diff --git a/sci-biology/paml/paml-4.4c-r1.ebuild b/sci-biology/paml/paml-4.4c-r1.ebuild deleted file mode 100644 index 27fe5ed4c769..000000000000 --- a/sci-biology/paml/paml-4.4c-r1.ebuild +++ /dev/null @@ -1,47 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit toolchain-funcs versionator - -MY_P=$(version_format_string '${PN}$1$2') - -DESCRIPTION="Phylogenetic Analysis by Maximum Likelihood" -HOMEPAGE="http://abacus.gene.ucl.ac.uk/software/paml.html" -SRC_URI="http://abacus.gene.ucl.ac.uk/software/${PN}${PV}.tar.gz" - -LICENSE="free-noncomm" -SLOT="0" -KEYWORDS="amd64 x86" -IUSE="" - -S=${WORKDIR}/${MY_P} - -src_prepare() { - # Notice send by mail to prof. Ziheng Yang - sed -i "s/\$(CC)/& \$(LDFLAGS)/" src/Makefile || die #335608 -} - -src_compile() { - emake -C src \ - CC="$(tc-getCC)" \ - CFLAGS="${CFLAGS} -Wno-unused-result" \ - LDFLAGS="${LDFLAGS}" -} - -src_install() { - dodoc README.txt doc/* - - insinto /usr/share/${PN}/control - doins *.ctl - - insinto /usr/share/${PN}/dat - doins stewart* *.dat dat/* - - insinto /usr/share/${PN} - doins -r examples/ - - cd src || die - dobin baseml codeml basemlg mcmctree pamp evolver yn00 chi2 -} |