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authorDavid Seifert <soap@gentoo.org>2022-11-20 22:23:10 +0100
committerDavid Seifert <soap@gentoo.org>2022-11-20 22:23:10 +0100
commit41183c48ca86eaaee196abfb18b935f12836f75a (patch)
tree43a46b40ccc07f13578de83a1484c9cd7388e40b /sci-biology
parentnet-im/skypeforlinux: drop versions (diff)
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sci-biology/hmmer: expose XSI pthread_setconcurrency() prototypes
Closes: https://bugs.gentoo.org/882279 Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/hmmer/hmmer-2.3.2-r5.ebuild5
1 files changed, 4 insertions, 1 deletions
diff --git a/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild b/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild
index b9f77b9dfce8..b305820faff3 100644
--- a/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild
+++ b/sci-biology/hmmer/hmmer-2.3.2-r5.ebuild
@@ -3,7 +3,7 @@
EAPI=8
-inherit toolchain-funcs
+inherit flag-o-matic toolchain-funcs
DESCRIPTION="Sequence analysis using profile hidden Markov models"
HOMEPAGE="http://hmmer.org/"
@@ -23,6 +23,9 @@ PATCHES=(
)
src_configure() {
+ # required to expose pthread_setconcurrency(), #882279
+ append-cppflags -D_XOPEN_SOURCE=500
+
# prevent stray environmental variable
# from causing issues in the test phase
unset TMPDIR