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authorRepository mirror & CI <repomirrorci@gentoo.org>2022-02-13 23:37:02 +0000
committerRepository mirror & CI <repomirrorci@gentoo.org>2022-02-13 23:37:02 +0000
commit79ba4b8a5202a526d541677243f4161ca2459910 (patch)
treee077306ae17f23fa591f6c262e078a4dbda154d7 /metadata/md5-cache
parentMerge updates from master (diff)
downloadgentoo-79ba4b8a5202a526d541677243f4161ca2459910.tar.gz
gentoo-79ba4b8a5202a526d541677243f4161ca2459910.tar.bz2
gentoo-79ba4b8a5202a526d541677243f4161ca2459910.zip
2022-02-13 23:36:57 UTC
Diffstat (limited to 'metadata/md5-cache')
-rw-r--r--metadata/md5-cache/app-i18n/man-pages-l10n-4.12.1 (renamed from metadata/md5-cache/app-i18n/man-pages-l10n-4.12.0)2
-rw-r--r--metadata/md5-cache/dev-libs/protobuf-3.19.14
-rw-r--r--metadata/md5-cache/dev-python/mypy-0.9314
-rw-r--r--metadata/md5-cache/dev-python/numpy-1.22.24
-rw-r--r--metadata/md5-cache/dev-python/protobuf-python-3.19.14
-rw-r--r--metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-domalign-0.1.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-emnu-1.05.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660)12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-signature-0.1.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-structure-0.1.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-topo-2.0.660)8
-rw-r--r--metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 (renamed from metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660)8
-rw-r--r--metadata/md5-cache/sci-biology/emboss-6.6.0-r2 (renamed from metadata/md5-cache/sci-biology/emboss-6.6.0-r1)10
-rw-r--r--metadata/md5-cache/sci-libs/libxc-5.1.016
-rw-r--r--metadata/md5-cache/sci-libs/libxc-5.1.416
-rw-r--r--metadata/md5-cache/sci-libs/libxc-5.1.616
-rw-r--r--metadata/md5-cache/sci-libs/libxc-5.1.74
25 files changed, 78 insertions, 126 deletions
diff --git a/metadata/md5-cache/app-i18n/man-pages-l10n-4.12.0 b/metadata/md5-cache/app-i18n/man-pages-l10n-4.12.1
index f9c53cb2a1a1..3fd7182b790f 100644
--- a/metadata/md5-cache/app-i18n/man-pages-l10n-4.12.0
+++ b/metadata/md5-cache/app-i18n/man-pages-l10n-4.12.1
@@ -9,5 +9,5 @@ LICENSE=GPL-3+
RDEPEND=virtual/man l10n_de? ( !app-i18n/man-pages-de ) l10n_fr? ( !app-i18n/man-pages-fr ) l10n_it? ( !app-i18n/man-pages-it ) l10n_nl? ( !app-i18n/man-pages-nl ) l10n_pl? ( !app-i18n/man-pages-pl )
REQUIRED_USE=|| ( l10n_cs l10n_da l10n_de l10n_el l10n_es l10n_fa l10n_fi l10n_fr l10n_hu l10n_id l10n_it l10n_mk l10n_nb l10n_nl l10n_pl l10n_pt-BR l10n_ro l10n_sr l10n_sv )
SLOT=0
-SRC_URI=https://salsa.debian.org/manpages-l10n-team/manpages-l10n/-/archive/v4.12.0/manpages-l10n-v4.12.0.tar.bz2
+SRC_URI=https://salsa.debian.org/manpages-l10n-team/manpages-l10n/-/archive/v4.12.1/manpages-l10n-v4.12.1.tar.bz2
_md5_=31a576564436dd913fe2e4303f9389e0
diff --git a/metadata/md5-cache/dev-libs/protobuf-3.19.1 b/metadata/md5-cache/dev-libs/protobuf-3.19.1
index b090f1bd8e95..15f9038ba458 100644
--- a/metadata/md5-cache/dev-libs/protobuf-3.19.1
+++ b/metadata/md5-cache/dev-libs/protobuf-3.19.1
@@ -6,11 +6,11 @@ EAPI=7
HOMEPAGE=https://developers.google.com/protocol-buffers/ https://github.com/protocolbuffers/protobuf
INHERIT=autotools elisp-common flag-o-matic multilib-minimal toolchain-funcs
IUSE=emacs examples static-libs test zlib abi_x86_32 abi_x86_64 abi_x86_x32 abi_mips_n32 abi_mips_n64 abi_mips_o32 abi_s390_32 abi_s390_64
-KEYWORDS=~alpha amd64 arm arm64 -hppa ~ia64 ~mips ppc ppc64 ~riscv ~s390 sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos
+KEYWORDS=~alpha amd64 arm arm64 -hppa ~ia64 ~mips ppc ppc64 ~riscv ~s390 sparc x86 ~amd64-linux ~x86-linux ~x64-macos
LICENSE=BSD
RDEPEND=emacs? ( app-editors/emacs:* ) zlib? ( sys-libs/zlib[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] )
RESTRICT=!test? ( test )
SLOT=0/30
SRC_URI=https://github.com/protocolbuffers/protobuf/archive/v3.19.1.tar.gz -> protobuf-3.19.1.tar.gz
_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e elisp-common cf4fd1b0835b9f3e638724840468064a edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multilib-build 75c3a5814f2cb851f641711bfcc100c0 multilib-minimal 4b0f1857965db8869a729948d5277e0b
-_md5_=4af5c2f4bd46e8a734cfb06cf7790704
+_md5_=d6bf161a4f045e5eb6988d82ad519834
diff --git a/metadata/md5-cache/dev-python/mypy-0.931 b/metadata/md5-cache/dev-python/mypy-0.931
index e89b118c26aa..514f3e1cfb3c 100644
--- a/metadata/md5-cache/dev-python/mypy-0.931
+++ b/metadata/md5-cache/dev-python/mypy-0.931
@@ -5,7 +5,7 @@ EAPI=8
HOMEPAGE=http://www.mypy-lang.org/
INHERIT=distutils-r1 multiprocessing
IUSE=doc test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10
-KEYWORDS=~alpha amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ppc64 ~riscv ~s390 ~sparc ~x86
+KEYWORDS=~alpha amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ppc64 ~riscv ~s390 ~sparc x86
LICENSE=MIT
RDEPEND=!dev-util/stubgen >=dev-python/psutil-4[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-python/typed-ast-1.4.0[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] <dev-python/typed-ast-1.5.0[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-python/typing-extensions-3.7.4[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-python/mypy_extensions-0.4.3[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] <dev-python/mypy_extensions-0.5.0[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/tomli[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 )
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 )
@@ -13,4 +13,4 @@ RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/python/mypy/archive/v0.931.tar.gz -> mypy-0.931.tar.gz
_eclasses_=multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multiprocessing 61c959fc55c15c00bbb1079d6a71370b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 python-utils-r1 ce976d20176213d68719e1a760f6e9fe python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 distutils-r1 5560689d3cb005ec97659ff697b42684
-_md5_=fe60596ded6c2f281d55bd61f0b20c03
+_md5_=47aaf43b7c19d62daf5eb0341aebcf8c
diff --git a/metadata/md5-cache/dev-python/numpy-1.22.2 b/metadata/md5-cache/dev-python/numpy-1.22.2
index 382e1eb46d34..0860e1a098f4 100644
--- a/metadata/md5-cache/dev-python/numpy-1.22.2
+++ b/metadata/md5-cache/dev-python/numpy-1.22.2
@@ -6,7 +6,7 @@ EAPI=8
HOMEPAGE=https://numpy.org/
INHERIT=distutils-r1 flag-o-matic fortran-2 toolchain-funcs
IUSE=doc lapack test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10
-KEYWORDS=~alpha amd64 ~arm arm64 hppa ~ia64 ~m68k ~mips ppc ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~x64-solaris ~x86-solaris
+KEYWORDS=~alpha amd64 ~arm arm64 hppa ~ia64 ~m68k ~mips ppc ppc64 ~riscv ~s390 ~sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~x64-solaris ~x86-solaris
LICENSE=BSD
RDEPEND=lapack? ( >=virtual/cblas-3.8 >=virtual/lapack-3.8 ) python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8[threads(+)] ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9[threads(+)] ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10[threads(+)] ) lapack? ( virtual/fortran )
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 )
@@ -14,4 +14,4 @@ RESTRICT=!test? ( test )
SLOT=0
SRC_URI=mirror://pypi/n/numpy/numpy-1.22.2.zip doc? ( https://numpy.org/doc/1.22/numpy-html.zip -> numpy-html-1.22.2.zip https://numpy.org/doc/1.22/numpy-ref.pdf -> numpy-ref-1.22.2.pdf https://numpy.org/doc/1.22/numpy-user.pdf -> numpy-user-1.22.2.pdf )
_eclasses_=multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multiprocessing 61c959fc55c15c00bbb1079d6a71370b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 python-utils-r1 ce976d20176213d68719e1a760f6e9fe python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 distutils-r1 5560689d3cb005ec97659ff697b42684 flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 7e39eb204d37699d5f1eaf9f4d61888a
-_md5_=e1ef50a0f52cdcd48d0b80e003548b70
+_md5_=a694d284e0b679793e5a14e09822318d
diff --git a/metadata/md5-cache/dev-python/protobuf-python-3.19.1 b/metadata/md5-cache/dev-python/protobuf-python-3.19.1
index dda12f5c8001..747c180a3b5c 100644
--- a/metadata/md5-cache/dev-python/protobuf-python-3.19.1
+++ b/metadata/md5-cache/dev-python/protobuf-python-3.19.1
@@ -6,7 +6,7 @@ EAPI=7
HOMEPAGE=https://developers.google.com/protocol-buffers/ https://github.com/protocolbuffers/protobuf
INHERIT=distutils-r1
IUSE=test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10
-KEYWORDS=~alpha amd64 arm ~arm64 -hppa ~ia64 ~mips ppc ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos
+KEYWORDS=~alpha amd64 arm ~arm64 -hppa ~ia64 ~mips ppc ppc64 ~riscv ~sparc x86 ~amd64-linux ~x86-linux ~x64-macos
LICENSE=BSD
RDEPEND=python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) ~dev-libs/protobuf-3.19.1 dev-python/namespace-google[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/six[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 )
REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 )
@@ -14,4 +14,4 @@ RESTRICT=!test? ( test )
SLOT=0/30
SRC_URI=https://github.com/protocolbuffers/protobuf/archive/v3.19.1.tar.gz -> protobuf-3.19.1.tar.gz
_eclasses_=multibuild d79bd5b4bc4edcb1f5bc19591f8d4714 multiprocessing 61c959fc55c15c00bbb1079d6a71370b toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 python-utils-r1 ce976d20176213d68719e1a760f6e9fe python-r1 bcd408f1e4a9669198ef4dfcd5ab8696 distutils-r1 5560689d3cb005ec97659ff697b42684
-_md5_=4a3ef67add6974d04e73b5ed0eed341c
+_md5_=54415360373fc0af30dc7552c0d28574
diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
index da43c7b3ce5a..e06a27ee6788 100644
--- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Applications from the CBS group
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=77305643fe2a87a5fac7d915688baa6a
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=56469e1c3bb7c4baac8ad99638b59ff0
diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
index d0997e75099b..3cc87f1ca348 100644
--- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Clustal Omega - Multiple Sequence Alignment
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=58b5684a48770c482660c463cca0df76
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=864a13621791118f794da4601dcde749
diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
index f2bd8d1d1328..01d26cbf7cfe 100644
--- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Protein domain analysis add-on package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=20f6c7abf908473570516ff49847a320
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=af29c98cab7134ba05c6d874e37d95dc
diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
index eda1423822fe..efd3de06aae7 100644
--- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Protein domain alignment add-on package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=fc6983ff5591fa7825d4cd99d376c861
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=677a5e171c80e94969c1ab9c0b55e283
diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
index 66c704721de4..e221fc2f5aa2 100644
--- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Protein domain search add-on package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=00bdcd88d6e9743af4531e223888195b
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=e0ca10c2776835b0cd20c1b0f0721a1a
diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
index b39aaa805577..3519d8f1b25b 100644
--- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660
+++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Simple menu of EMBOSS applications
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=54738204e5b5aeb9aa0216f7c53c77df
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=a33d45b5be798e7ebfcef8c59a300c88
diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
index fbb262dbb62b..3424936d8b70 100644
--- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=63d13362b3c8b045b78ed452697b59f3
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=95026ca22c2bacedf52a70b4428e7753
diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
index 478215bc6265..1ab333858510 100644
--- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of HMMER wrapper - sequence analysis with profile HMMs
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=c5399e3d4e7e59aaa70e6477a41a7345
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=fb64fb071ec661ab550e0b33bc78b536
diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
index bf131a66b032..af0b41dcd735 100644
--- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of InterProScan motif detection add-on package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=88c3ac6be6849f4230f25bf463931561
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=06b3cb4ecb53ada6b96c0f8fe91680e9
diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
index bf16b36974b1..0c8af890d58b 100644
--- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
@@ -1,15 +1,15 @@
BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.4:1.16 ) >=sys-devel/autoconf-2.71 >=sys-devel/libtool-2.4
DEFINED_PHASES=configure install prepare
-DEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
+DEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of MSE - Multiple Sequence Screen Editor
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
-RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
+RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=c9843cceb68b918a80ed15c2043942d3
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=b6d66fbfe89f6c64f635551357dc90f4
diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
index cc547ea4f576..99a10ac7892b 100644
--- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660
+++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of The Phylogeny Inference Package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2 free-noncomm
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=9ecb2590e9a1ae2353dafa387e89d48c
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=93c762366f9cfe8fbfdffd0fdc0483d5
diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
index 3cba4b59293c..5efaff339bbb 100644
--- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Protein signature add-on package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=0be4d65f424916bbe6d7f507fed3014f
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=193e23282bfd7f7751d7e37988a0ec44
diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
index 874fdae2caa8..0a7c6a7f7c4f 100644
--- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660
+++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Protein structure add-on package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=a0f67c8d9181b193f43eb5e99fdbe92f
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=c54138383c80476f9d515e5e2a33acaf
diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
index a7931485a060..0e9ba23b1614 100644
--- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660
+++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Transmembrane protein display
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=9ecbee609930ce8d1c14b72746c0ff64
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=30ddf1c7471e11d692477ffa5a3a9956
diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
index 04be649a3b21..ac7b2a10089b 100644
--- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660
+++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
@@ -2,14 +2,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
DESCRIPTION=EMBOSS integrated version of Vienna RNA package - RNA folding
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2
+INHERIT=autotools emboss-r3
IUSE=mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a
-_md5_=a8689fa9b1b33a787474fc8f11e65998
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a
+_md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7
diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
index bf0dd52a32d5..a5c377a3341c 100644
--- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1
+++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
@@ -2,15 +2,15 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/
DEFINED_PHASES=configure install postinst prepare
DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
DESCRIPTION=The European Molecular Biology Open Software Suite - A sequence analysis package
-EAPI=7
+EAPI=8
HOMEPAGE=http://emboss.sourceforge.net/
-INHERIT=emboss-r2 readme.gentoo-r1
+INHERIT=autotools emboss-r3 readme.gentoo-r1
IUSE=minimal mysql pdf png postgres X
KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2 GPL-2 Apache-2.0 GPL-3+ CC-BY-3.0
PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci-biology/prints sci-biology/prosite sci-biology/rebase )
RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
SLOT=0
-SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches.tar.xz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4251d4c84c25f59094fd557e0063a974 eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r2 6149b9a50119f07968449cfd6874508a readme.gentoo-r1 eebd0164fe61f4f7b64a683e83fdceb1
-_md5_=ca77e598a1b176f454ece551aad686da
+SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz
+_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 f814fbb5ffa5d098b607eeea7f80e76a readme.gentoo-r1 eebd0164fe61f4f7b64a683e83fdceb1
+_md5_=9856dbbe227d34ba8fd5a46c30dc912f
diff --git a/metadata/md5-cache/sci-libs/libxc-5.1.0 b/metadata/md5-cache/sci-libs/libxc-5.1.0
deleted file mode 100644
index 5d96c32c925e..000000000000
--- a/metadata/md5-cache/sci-libs/libxc-5.1.0
+++ /dev/null
@@ -1,16 +0,0 @@
-BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.4:1.16 ) >=sys-devel/autoconf-2.71 >=sys-devel/libtool-2.4 virtual/fortran
-DEFINED_PHASES=configure install prepare setup
-DEPEND=virtual/fortran
-DESCRIPTION=A library of exchange-correlation functionals for use in DFT
-EAPI=7
-HOMEPAGE=https://octopus-code.org/wiki/Libxc
-INHERIT=autotools fortran-2
-IUSE=fortran test
-KEYWORDS=amd64 x86 ~amd64-linux
-LICENSE=MPL-2.0
-RDEPEND=virtual/fortran
-RESTRICT=!test? ( test )
-SLOT=0
-SRC_URI=https://gitlab.com/libxc/libxc/-/archive/5.1.0/libxc-5.1.0.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e fortran-2 7e39eb204d37699d5f1eaf9f4d61888a
-_md5_=1d6edcbf8fc37390c5ba86337dcb8f7c
diff --git a/metadata/md5-cache/sci-libs/libxc-5.1.4 b/metadata/md5-cache/sci-libs/libxc-5.1.4
deleted file mode 100644
index 16f9702b99d6..000000000000
--- a/metadata/md5-cache/sci-libs/libxc-5.1.4
+++ /dev/null
@@ -1,16 +0,0 @@
-BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.4:1.16 ) >=sys-devel/autoconf-2.71 >=sys-devel/libtool-2.4 virtual/fortran
-DEFINED_PHASES=configure install prepare setup
-DEPEND=virtual/fortran
-DESCRIPTION=A library of exchange-correlation functionals for use in DFT
-EAPI=7
-HOMEPAGE=https://octopus-code.org/wiki/Libxc
-INHERIT=autotools fortran-2
-IUSE=fortran test
-KEYWORDS=amd64 ~x86 ~amd64-linux
-LICENSE=MPL-2.0
-RDEPEND=virtual/fortran
-RESTRICT=!test? ( test )
-SLOT=0
-SRC_URI=https://gitlab.com/libxc/libxc/-/archive/5.1.4/libxc-5.1.4.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e fortran-2 7e39eb204d37699d5f1eaf9f4d61888a
-_md5_=de93bec1d5a60a1815f7919f20a9b2ac
diff --git a/metadata/md5-cache/sci-libs/libxc-5.1.6 b/metadata/md5-cache/sci-libs/libxc-5.1.6
deleted file mode 100644
index a1cacb023c94..000000000000
--- a/metadata/md5-cache/sci-libs/libxc-5.1.6
+++ /dev/null
@@ -1,16 +0,0 @@
-BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.4:1.16 ) >=sys-devel/autoconf-2.71 >=sys-devel/libtool-2.4 virtual/fortran
-DEFINED_PHASES=configure install prepare setup
-DEPEND=virtual/fortran
-DESCRIPTION=A library of exchange-correlation functionals for use in DFT
-EAPI=8
-HOMEPAGE=https://octopus-code.org/wiki/Libxc
-INHERIT=autotools fortran-2
-IUSE=fortran test
-KEYWORDS=amd64 ~x86 ~amd64-linux
-LICENSE=MPL-2.0
-RDEPEND=virtual/fortran
-RESTRICT=!test? ( test )
-SLOT=0
-SRC_URI=https://gitlab.com/libxc/libxc/-/archive/5.1.6/libxc-5.1.6.tar.gz
-_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e fortran-2 7e39eb204d37699d5f1eaf9f4d61888a
-_md5_=bca111b2c18efa6b51b5dbf3d2f8d030
diff --git a/metadata/md5-cache/sci-libs/libxc-5.1.7 b/metadata/md5-cache/sci-libs/libxc-5.1.7
index cd13205f8bef..1ab891df2ee2 100644
--- a/metadata/md5-cache/sci-libs/libxc-5.1.7
+++ b/metadata/md5-cache/sci-libs/libxc-5.1.7
@@ -6,11 +6,11 @@ EAPI=8
HOMEPAGE=https://octopus-code.org/wiki/Libxc
INHERIT=autotools fortran-2
IUSE=fortran test
-KEYWORDS=amd64 ~x86 ~amd64-linux
+KEYWORDS=amd64 x86 ~amd64-linux
LICENSE=MPL-2.0
RDEPEND=virtual/fortran
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://gitlab.com/libxc/libxc/-/archive/5.1.7/libxc-5.1.7.tar.gz
_eclasses_=gnuconfig 262062cef0ba4f22b397193da514a350 toolchain-funcs badd6e329e1f3e6bee99b35bf8763ce8 multilib de4beb52bfa93c4c5d96792a6b5e1784 libtool 241a8f577b9781a42a7421e53448a44e autotools 6cc26735fa9dd59e8c62880beda05b6e fortran-2 7e39eb204d37699d5f1eaf9f4d61888a
-_md5_=a6f81c6514901068f3df6a587bb6e246
+_md5_=114c5cd980634b6975335caeb5e9aea3