diff options
author | Repository QA checks <repo-qa-checks@gentoo.org> | 2016-10-22 10:20:25 +0000 |
---|---|---|
committer | Repository QA checks <repo-qa-checks@gentoo.org> | 2016-10-22 10:20:25 +0000 |
commit | c29270a3d2cace24ca44e1bd0fd6e91676151e67 (patch) | |
tree | f0e2e5c5ce20a2c6fdd5824a5a3162249685bd7d /metadata/md5-cache/sci-biology | |
parent | Merge updates from master (diff) | |
download | gentoo-c29270a3d2cace24ca44e1bd0fd6e91676151e67.tar.gz gentoo-c29270a3d2cace24ca44e1bd0fd6e91676151e67.tar.bz2 gentoo-c29270a3d2cace24ca44e1bd0fd6e91676151e67.zip |
2016-10-22 10:19:57 UTC
Diffstat (limited to 'metadata/md5-cache/sci-biology')
213 files changed, 213 insertions, 213 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 index 2dae7b33d089..c8b1d25e2c68 100644 --- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 +++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 @@ -10,5 +10,5 @@ RESTRICT=mirror SLOT=0 SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=9632d8d4bd171156ad6edf821009dbc6 diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index 81c67ad8d8da..5db393672662 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -10,5 +10,5 @@ RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:webapp pkg_setup:webapp src_unpack:perl-module src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be webapp 42c6ef7af496b228f9854b3c81e4b226 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be webapp 42c6ef7af496b228f9854b3c81e4b226 _md5_=caf58a720664c095c77fe9b64b311dbe diff --git a/metadata/md5-cache/sci-biology/abyss-1.3.3 b/metadata/md5-cache/sci-biology/abyss-1.3.3 index 2296450d3846..dcced09792cb 100644 --- a/metadata/md5-cache/sci-biology/abyss-1.3.3 +++ b/metadata/md5-cache/sci-biology/abyss-1.3.3 @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/sparsehash dev-libs/boost mpi? ( virtual/mpi ) SLOT=0 SRC_URI=http://www.bcgsc.ca/downloads/abyss/abyss-1.3.3.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=cd8ca0a92b04d5ab1ebf39e92c92d888 diff --git a/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 b/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 index 26a2ef71593f..fae59d0b0f9d 100644 --- a/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 +++ b/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/sparsehash dev-libs/boost misc-haskell? ( dev-libs/gmp:0= virtua SLOT=0 SRC_URI=http://www.bcgsc.ca/downloads/abyss/abyss-1.3.6.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5edcc89dbe8b21d260f6545673c709d5 diff --git a/metadata/md5-cache/sci-biology/abyss-1.9.0-r1 b/metadata/md5-cache/sci-biology/abyss-1.9.0-r1 index 134a4d05c4d4..7fedb6390503 100644 --- a/metadata/md5-cache/sci-biology/abyss-1.9.0-r1 +++ b/metadata/md5-cache/sci-biology/abyss-1.9.0-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virt SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/1.9.0.tar.gz -> abyss-1.9.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=7c301b474921cb47df2fdbb12ccd1417 diff --git a/metadata/md5-cache/sci-biology/allpathslg-42337 b/metadata/md5-cache/sci-biology/allpathslg-42337 index 9e0d34b174fe..6c0f54dfea13 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-42337 +++ b/metadata/md5-cache/sci-biology/allpathslg-42337 @@ -8,5 +8,5 @@ LICENSE=MIT SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-42337.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5dbc3e63efe609db145c569cdcba1922 diff --git a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 index c5df229d1b70..c72771dea1c4 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 +++ b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 @@ -9,5 +9,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/vaal SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5da6d578657883dd590b47d5bac03e65 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r2 b/metadata/md5-cache/sci-biology/amap-2.2-r2 index 8542715a70d8..451b60e8a58e 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r2 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r2 @@ -10,5 +10,5 @@ RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-opt-2 pkg_setup:java-pkg-opt-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-opt-2 40db73f27fc6458ec2105812a4f261c7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-opt-2 40db73f27fc6458ec2105812a4f261c7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8010150e6242df5d294ab35b887af2a1 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0 b/metadata/md5-cache/sci-biology/amos-3.1.0 index ed549d7d08cb..68bd4e68deeb 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0 @@ -10,5 +10,5 @@ RDEPEND=qt4? ( dev-qt/qtcore:4 ) dev-perl/DBI dev-perl/Statistics-Descriptive sc SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=57af6bf2b801ff256544c1ae4d6e2239 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r2 b/metadata/md5-cache/sci-biology/amos-3.1.0-r2 index 6849698785d3..35b4b169867f 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r2 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r2 @@ -10,5 +10,5 @@ RDEPEND=qt4? ( dev-qt/qtcore:4 ) dev-perl/DBI dev-perl/Statistics-Descriptive sc SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 _eclass_exported_funcs=src_configure:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=7c03cf026ee8384c15d8a787be2d0c41 diff --git a/metadata/md5-cache/sci-biology/arb-5.1-r1 b/metadata/md5-cache/sci-biology/arb-5.1-r1 index 5c57830c0837..9043db64e0e0 100644 --- a/metadata/md5-cache/sci-biology/arb-5.1-r1 +++ b/metadata/md5-cache/sci-biology/arb-5.1-r1 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.1/arbsrc.tgz -> arb-5.1.tgz mirror://gentoo/arb-5.1-glibc2.10.patch.bz2 https://dev.gentoo.org/~jlec/arb-5.1-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=ccac55e99a86ba7bca4258e0de6a277a diff --git a/metadata/md5-cache/sci-biology/arb-5.2 b/metadata/md5-cache/sci-biology/arb-5.2 index e14a9517630f..d13ac95dde82 100644 --- a/metadata/md5-cache/sci-biology/arb-5.2 +++ b/metadata/md5-cache/sci-biology/arb-5.2 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.2/arbsrc.tgz -> arb-5.2.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.2-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=c1e75a5c097ccea22adb427050d7ea9a diff --git a/metadata/md5-cache/sci-biology/arb-5.3 b/metadata/md5-cache/sci-biology/arb-5.3 index ea59a307220c..4de9119fbfcf 100644 --- a/metadata/md5-cache/sci-biology/arb-5.3 +++ b/metadata/md5-cache/sci-biology/arb-5.3 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.3/arbsrc.tgz -> arb-5.3.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.3-linker.patch.xz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6f4ceede9236fd4baf2032128fab2349 diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r1 b/metadata/md5-cache/sci-biology/ariadne-1.3-r1 index c29dbb10a87d..31b5010cde47 100644 --- a/metadata/md5-cache/sci-biology/ariadne-1.3-r1 +++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r1 @@ -9,5 +9,5 @@ RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1 SLOT=0 SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z _eclass_exported_funcs=src_unpack:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=1742c4b03c22637909dd5c35478feffe diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r2 b/metadata/md5-cache/sci-biology/ariadne-1.3-r2 index 5398cc812cb4..f0508a661c04 100644 --- a/metadata/md5-cache/sci-biology/ariadne-1.3-r2 +++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r2 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1 SLOT=0 SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6760dd272f3876553a07c32a95d4f672 diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index d879ff0cffd3..1ff62d38b994 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=d0f9ba272acefc27ec7b12c6d3b2b01d diff --git a/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 b/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 index c24fe36f8250..1ce8716b22b8 100644 --- a/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/jsoncpp sys-libs/zlib SLOT=0 SRC_URI=mirror://github/pezmaster31/bamtools/bamtools-1.0.2.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=7510135c49b6f635124664572ea56bb2 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.3.0 b/metadata/md5-cache/sci-biology/bamtools-2.3.0 index e0747bbcf47c..f0ef237f9fa8 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.3.0 +++ b/metadata/md5-cache/sci-biology/bamtools-2.3.0 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/jsoncpp-0.5.0-r1 <dev-libs/jsoncpp-1 sys-libs/zlib SLOT=0 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz -> bamtools-2.3.0.tar.gz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=14b6521e2975f38128d76c7ba4a5fb31 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 index eff1fa92e44e..75985bea1e59 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-j SLOT=0 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/beast-mcmc-1.7.5.tar.xz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=78a597e327e0b56f4074f590ef3eca4c diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-9999 b/metadata/md5-cache/sci-biology/beast-mcmc-9999 index 15beb3650a38..7559479f20c6 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-9999 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-9999 @@ -8,5 +8,5 @@ LICENSE=LGPL-3 RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-java/junit:4 dev-java/jebl:0 dev-java/matrix-toolkits-java dev-java/commons-math:2 dev-java/jdom-jaxen:1.0 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:subversion pkg_setup:java-pkg-2 src_unpack:subversion src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 subversion 750f91bd0705a41b26ba01bcee93aaad toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 subversion 750f91bd0705a41b26ba01bcee93aaad toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=91fd25b95c1888b46de27b583565e9d0 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0 index e6b0ce9a4bc2..b36aee21018c 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.26.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz _eclass_exported_funcs=pkg_setup:python-any-r1 src_configure:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-any-r1 1c20f9b800324335a8e3b137363362e8 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-any-r1 1c20f9b800324335a8e3b137363362e8 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3244c489c77e0c5ce691380f50256f1b diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 7125096708e7..42d77b2a9b40 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=78320f55e4a3ad5d498ceb56ecbc3171 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r1 b/metadata/md5-cache/sci-biology/biogrep-1.0-r1 index 58322d2cfa26..a6442a35ea84 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r1 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://web.mit.edu/bamel/biogrep-1.0.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=1dfeddc4aec877d95b036ca150a63ec5 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4 index 8c7abdaeed2c..aefc39a6ec94 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.1.4 +++ b/metadata/md5-cache/sci-biology/biopandas-0.1.4 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_3 python_targe SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz _eclass_exported_funcs=src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=91683944bda72d8b5f7f71f9ee5f3217 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index 9572a5bc602a..f871ebdac579 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -12,5 +12,5 @@ REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=a3fea82483d3bcdeb956b1e4d6842382 diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1 index d5bf46d51d28..2fdbb278b9db 100644 --- a/metadata/md5-cache/sci-biology/bioperl-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1 @@ -9,5 +9,5 @@ PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-d RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=68bced1b8c97790607fc2990bdd34bb4 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index ccf4d122a490..bd481ffb81ea 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=c86ac1da0676ffecc4a6d1473143a1ea diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 index 59552701d5e6..4466bae4c379 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=0b002dfc84485c315f3a837fdf29a6ba diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index f1d3b504ff84..cb662a2b3b30 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=57636449f55fd44067e7024bcb3be832 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 index 9b0f233c94ac..f2e70592dbd1 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=637485289bf69287c429734619a346eb diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index bf279a45f67e..945b6e5f07e9 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=019ccce216c420ea65d9cf1925a8de4b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 index 80920280040d..f98df7eda2ee 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 @@ -9,5 +9,5 @@ RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/ RESTRICT=test SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=580d88609d793360e4dac4df84e90155 diff --git a/metadata/md5-cache/sci-biology/biopython-1.65 b/metadata/md5-cache/sci-biology/biopython-1.65 index 2231b2e30d86..4b77502083e7 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.65 +++ b/metadata/md5-cache/sci-biology/biopython-1.65 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_py SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.65.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=ed3332b0c893b27c66efacb74b25fabd diff --git a/metadata/md5-cache/sci-biology/biopython-1.66 b/metadata/md5-cache/sci-biology/biopython-1.66 index 8c405be8df2f..bd7f160e044e 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.66 +++ b/metadata/md5-cache/sci-biology/biopython-1.66 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_py SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.66.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=3603e7d618d57e8df35f95bd62c52c56 diff --git a/metadata/md5-cache/sci-biology/biopython-1.68 b/metadata/md5-cache/sci-biology/biopython-1.68 index a8983dc2e842..7e27f7a4507f 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.68 +++ b/metadata/md5-cache/sci-biology/biopython-1.68 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_py SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.68.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=bb88a51eff2869d32526c4523b716237 diff --git a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 index 78637be75c3c..7be4ca297104 100644 --- a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 +++ b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( ruby_targets_ruby20 ruby_targets_ruby21 ) SLOT=0 SRC_URI=http://www.bioruby.org/archive/bioruby-1.4.3.0001.tar.gz _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=4ab8a9ff8fdd6d20d05074f7ecf49b06 diff --git a/metadata/md5-cache/sci-biology/bioruby-9999 b/metadata/md5-cache/sci-biology/bioruby-9999 index 85e611ec3475..f3490eb793e2 100644 --- a/metadata/md5-cache/sci-biology/bioruby-9999 +++ b/metadata/md5-cache/sci-biology/bioruby-9999 @@ -9,5 +9,5 @@ RDEPEND=ruby_targets_ruby20? ( dev-ruby/libxml[ruby_targets_ruby20] ) ruby_targe REQUIRED_USE=|| ( ruby_targets_ruby20 ruby_targets_ruby21 ) SLOT=0 _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=fae3d419139a3e08019e87e0bff2d4a4 diff --git a/metadata/md5-cache/sci-biology/blat-34 b/metadata/md5-cache/sci-biology/blat-34 index cd92dcfc653b..f48baa0c7464 100644 --- a/metadata/md5-cache/sci-biology/blat-34 +++ b/metadata/md5-cache/sci-biology/blat-34 @@ -8,5 +8,5 @@ LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=54aad31b5a90dc0387ba6c87ba539ff1 diff --git a/metadata/md5-cache/sci-biology/blat-34-r1 b/metadata/md5-cache/sci-biology/blat-34-r1 index 9f92d70fca70..1b9c8fc37d41 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r1 +++ b/metadata/md5-cache/sci-biology/blat-34-r1 @@ -8,5 +8,5 @@ LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2fb31e749261157d1329bfdeb6b73c6b diff --git a/metadata/md5-cache/sci-biology/blossoc-1.4.0 b/metadata/md5-cache/sci-biology/blossoc-1.4.0 index 692af5ab84a7..94a0cf700fdb 100644 --- a/metadata/md5-cache/sci-biology/blossoc-1.4.0 +++ b/metadata/md5-cache/sci-biology/blossoc-1.4.0 @@ -9,5 +9,5 @@ RDEPEND=sci-libs/gsl dev-libs/boost sci-biology/snpfile SLOT=0 SRC_URI=http://www.daimi.au.dk/~mailund/Blossoc/download/blossoc-1.4.0.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=7d43b42d61abc20f34b19ce387a4f72d diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2 b/metadata/md5-cache/sci-biology/bowtie-1.1.2 index 5fd6757d8285..2a2b3b16a7ff 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2 @@ -9,5 +9,5 @@ LICENSE=Artistic SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=bea647a3059e7392734895f8719da851 diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 index 96fefc353981..4db285ad2d0b 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=tbb? ( dev-cpp/tbb ) SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3ffda47d0c02ed05ec45a657f7a10b19 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.6 b/metadata/md5-cache/sci-biology/bowtie-2.2.6 index 3f4eb8b408f8..26e0e3ffa4d6 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.6 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.6 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.6/bowtie2-2.2.6-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5f8bf2d3f475b2c4c9d96b62096f7ab7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9 index b89a542f14de..a950dbe5b3cd 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.9 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=fb9cf41d089bf386702847a0689055c4 diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.12 b/metadata/md5-cache/sci-biology/bwa-0.7.12 index 937d5f6474dc..79ea06cd0291 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.12 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.12 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.12.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=fcc20ae2280da350669d2a27a7625237 diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.15 b/metadata/md5-cache/sci-biology/bwa-0.7.15 index 345a7454c1e2..2d08add5399d 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.15 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.15 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.15.tar.bz2 _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=4d3c46cb5a76a96e60903b8a63c97133 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.5.1 b/metadata/md5-cache/sci-biology/cd-hit-4.5.1 index 373e324b7ad8..2044ed9e37a5 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.5.1 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.5.1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://cdhit.googlecode.com/files/cd-hit-v4.5.1-2011-01-31.tgz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2219ae002375618957700246d19245ee diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.5.4 b/metadata/md5-cache/sci-biology/cd-hit-4.5.4 index 7beb6481c47c..c3da66f85800 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.5.4 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.5.4 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://cdhit.googlecode.com/files/cd-hit-v4.5.4-2011-03-07.tgz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2341c46a3e214cc187e24ee6e9619a28 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6 index 5e870d91ef80..fdf1b26cf664 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://cdhit.googlecode.com/files/cd-hit-v4.6-2012-04-25.tgz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=8a2e925af92a3450f7d695bc78112d38 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 index 041cb2a9d8e7..f23eb817446c 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=4e27f76eeb748a11d818033236165609 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 index 224ca74cdac6..708ba05d6232 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3fb162adb1f5e39f50f02b54632363df diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r3 b/metadata/md5-cache/sci-biology/clustalw-1.83-r3 index 9d312520c904..989984bfcfd9 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r3 @@ -7,5 +7,5 @@ LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=d3c4e4fe400e259421328a7aed1776d9 diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 index 786b90b4fb74..f7b756adcedb 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 @@ -10,5 +10,5 @@ RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=35aeabe13c3f17845ebe48287b554312 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 index b9ff6f93fc87..b381babe1f69 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz _eclass_exported_funcs=src_unpack:qt4-r2 src_prepare:- src_configure:qt4-r2 src_compile:qt4-r2 src_install:- -_eclasses_=base 3fe4f8980633fd7bc69e9887209ba2fe eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 qmake-utils 0a242e7177789b0028b4045f336dd4db qt4-r2 d6c113024bb3086a1facc65cd338930e toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=base 3fe4f8980633fd7bc69e9887209ba2fe eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 qmake-utils 0a242e7177789b0028b4045f336dd4db qt4-r2 d6c113024bb3086a1facc65cd338930e toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=46a1492fe4bfbbe5e2adc7a94fe7d5a6 diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index af91d6f33484..f1123400ce49 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -11,5 +11,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=60e6b248f16b3a00f6592dfb59b125b4 diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 index 93176b85f933..11f14c22c791 100644 --- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 +++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen: SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6b93e6dbae7355a08affefe4c39cf8dc diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 index ae9502d26bf6..2b5e9ebb7b01 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=bebacda7b9082951500b83768cf250d1 diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1 index 5f98f01e0d76..c5cb2d375021 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=ee98e826a5b57d9ea610cda6d19929da diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4 index b1337c2ac000..dbf02d4f148b 100644 --- a/metadata/md5-cache/sci-biology/diya-1.0_rc4 +++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal SLOT=0 SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=fa0fc42a99b6d4398e74da15f5fa8b3e diff --git a/metadata/md5-cache/sci-biology/elph-0.1.5 b/metadata/md5-cache/sci-biology/elph-0.1.5 index 5263b56954fa..bd211e0d8ab6 100644 --- a/metadata/md5-cache/sci-biology/elph-0.1.5 +++ b/metadata/md5-cache/sci-biology/elph-0.1.5 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-0.1.5.tar.gz _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=fd17c47a2e8f2da8e6c3236a9e7dec89 diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1 b/metadata/md5-cache/sci-biology/elph-1.0.1 index 43f395608ef0..ae9d1dceec8c 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=57736c0fadfb9a7f58d7b479b2ccecc6 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 index 6bbe93cac9cd..b3bbd06999c2 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.650.tar.gz -> embassy-cbstools-1.0.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=186a646a01796d80e96382eda18890f6 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 index ab797435764c..78cd2991e3c1 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plp SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.tar.gz -> embassy-clustalomega-1.1.0.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=78d217460299d444dd47ef25eccc6780 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 index 52ffe83d4d44..fd8a22b92702 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.650.tar.gz -> embassy-domainatrix-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=63b5b0b16a577be381e2872c78742942 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 index e3333301e542..e76ec1e8375e 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.650.tar.gz -> embassy-domalign-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=af2fa82680f0057751ab091d1c0de659 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 index 0ff11b3d7764..ae365999bcf5 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.650.tar.gz -> embassy-domsearch-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=4f3855b8861141c88bf0c4c267e34074 diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 index 02b047062f04..f6cca90e9f1b 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses:= ) dev-libs/expat dev-libs/libpcre:3 sci-li SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.650.tar.gz -> embassy-emnu-1.05.650-r1.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=8dbc38e69d33e3dab2515755b7bdb388 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 index e9b5d372adc3..552b058cf22f 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.650.tar.gz -> embassy-esim4-1.0.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=372a55d64865de9d88f2b796cfe2c8e6 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 index 65773d9a905b..6c4c9ef3f7a3 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/hmmer dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys- SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.650.tar.gz -> embassy-hmmer-2.3.2.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=b64d4a79867d45d7cc2bad22451b0d0b diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 index b92f82b860fe..aec7c7c720a5 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.650.tar.gz -> embassy-iprscan-4.3.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2be3be220e11153b8999ac69cad1485c diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 index 121101c9bd26..e54caae49c39 100644 --- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 +++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-l SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.650.tar.gz -> embassy-meme-4.7.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=aeca403317a95de25a390eef8bc0d435 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 index daa020a12d44..3dd365933665 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses ) dev-libs/expat dev-libs/libpcre:3 sci-libs SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.650.tar.gz -> embassy-mse-3.0.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=c282ceaf2e8cc53eba54fac7023c9a60 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 index 9fa4329d1e47..05ecf092c152 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.650.tar.gz -> embassy-phylipnew-3.69.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=27ce1ba3779bb97b11294e369862e616 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 index cef7b6054e73..d8d8ee0c95a5 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.650.tar.gz -> embassy-signature-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5dac08ee358b394884c4fe4b53a1f065 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 index 1b26d8b3480a..ecb6ef90ec7c 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.650.tar.gz -> embassy-structure-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=a6af3b3439050d2ecb65956c012c92ba diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 index 0d3e1c94a058..7fe41321720c 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.650.tar.gz -> embassy-topo-2.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=0edf6a1e13a42a6a8bc4050386b71ddd diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 index 6c559b3a90c4..fe4e4510555a 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.650.tar.gz -> embassy-vienna-1.7.2.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=ebea12eb95dc9f0deba32a8853c44f7c diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0 b/metadata/md5-cache/sci-biology/emboss-6.6.0 index e2ef97a97a30..a711949890a5 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0 @@ -11,5 +11,5 @@ RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=890cbd4e13b0051be2ccb8969f15be24 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1 b/metadata/md5-cache/sci-biology/eugene-4.1 index 75519071b2d9..96eaad4ef20b 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1 @@ -10,5 +10,5 @@ RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1157/eugene-4.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=f64907e857ca8ed5db03a3315cc74e33 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index 05f3c757c514..b0f3e9e83e2c 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -10,5 +10,5 @@ RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=ff59eaa4f9ea8406f660078a5acb8f67 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 index e20522488e64..7ff5367baa09 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) SLOT=0 SRC_URI=http://www.ebi.ac.uk/~guy/exonerate/exonerate-2.2.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=178b12fcf2b0c150e6145c1d28525a7b diff --git a/metadata/md5-cache/sci-biology/express-0.9.5 b/metadata/md5-cache/sci-biology/express-0.9.5 index 552ef1c48a86..1b8b03eacfbe 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5 +++ b/metadata/md5-cache/sci-biology/express-0.9.5 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=010fdb416bdadb2983034b01eb9b8f58 diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1 index 4495cd4b6001..53cf40bd1164 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5-r1 +++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3bc7636082b31abb4ab2b71a0a941a81 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 05e9d3aed733..e4e6150efe1e 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sy SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=c2f687191454c4316a3ee0917423a42f diff --git a/metadata/md5-cache/sci-biology/fasta-35.4.10 b/metadata/md5-cache/sci-biology/fasta-35.4.10 index 1457be332522..87e5f16d7909 100644 --- a/metadata/md5-cache/sci-biology/fasta-35.4.10 +++ b/metadata/md5-cache/sci-biology/fasta-35.4.10 @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta3/fasta-35.4.10.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=45693968b9680c3c6bfd9a05d54dc62a diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index 5e3fd9f3d53c..1da01b2d428d 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3f2fe79adf516da76e4ecbb185cad0bc diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7 index daad25dc914f..39676cbfcdc3 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.7 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=61aa89b01dafa750683148d15dde6e52 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index 091093e6fa45..7480ceff8e75 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=a57c162d671d45c02f889b16b5bdb38e diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 b/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 index 5d1b4ed50951..bcce9d082391 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 @@ -9,5 +9,5 @@ RESTRICT=mirror bindist strip SLOT=0 SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.3/fahclient_7.3.6-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.3/fahclient_7.3.6-64bit-release.tar.bz2 ) _eclass_exported_funcs=pkg_preinst:- pkg_postrm:- pkg_postinst:- pkg_setup:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 user 80aaa71614ced86f02ee1a513821dc87 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 user 80aaa71614ced86f02ee1a513821dc87 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3c0aaea43823b5adf947c6a0e5090ec3 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.4.4 b/metadata/md5-cache/sci-biology/foldingathome-7.4.4 index 93cf91fac5d8..bf367a5a5eb4 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.4.4 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.4.4 @@ -9,5 +9,5 @@ RESTRICT=mirror bindist strip SLOT=0 SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.4/fahclient_7.4.4-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.4/fahclient_7.4.4-64bit-release.tar.bz2 ) _eclass_exported_funcs=pkg_preinst:- pkg_postrm:- pkg_postinst:- pkg_setup:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 user 80aaa71614ced86f02ee1a513821dc87 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 user 80aaa71614ced86f02ee1a513821dc87 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=9242ae0fc742c83a08f28417712e5fe3 diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4 index 624404da1db6..1360e057c2a4 100644 --- a/metadata/md5-cache/sci-biology/gatk-2.4 +++ b/metadata/md5-cache/sci-biology/gatk-2.4 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:vcs-snapshot src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 vcs-snapshot 2b65ecb2d0f91e4322c2ac8d673993bd versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 vcs-snapshot 2b65ecb2d0f91e4322c2ac8d673993bd versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=6e7edd964ee7eedfb9d0941dd49b840e diff --git a/metadata/md5-cache/sci-biology/gatk-9999 b/metadata/md5-cache/sci-biology/gatk-9999 index 312275ee2474..25b522268693 100644 --- a/metadata/md5-cache/sci-biology/gatk-9999 +++ b/metadata/md5-cache/sci-biology/gatk-9999 @@ -8,5 +8,5 @@ LICENSE=MIT RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:git-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 git-2 7af5d170bfc02983b4bcd3167dc5edd4 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=87fbeadb7427c25b13f5837263f8939f diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index b84208efdafa..c7d9a0e8c8cc 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3330594e03e29a02e3796906b02101a9 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 index 585bf095469d..0e18fcd0b072 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 +++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=e88e62a74099bfe5158b5dcc02b5b282 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index c46c9c8c09ee..7fa75be0c0e2 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=http://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=0548d7bfa5d5a7de4e2265a7038e3c0b diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index bb237f6f227f..f1943c8a8b33 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=b42c827c4d6dc5e11c3d97315cf87522 diff --git a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 index f13bbd03fa54..af0495253857 100644 --- a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 +++ b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 @@ -7,5 +7,5 @@ LICENSE=gmap SLOT=0 SRC_URI=http://research-pub.gene.com/gmap/src/gmap-gsnap-2015-12-31.v5.tar.gz _eclass_exported_funcs=- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=cb95c1947d1ab705cdf541bd023bbab0 diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 index 8f5935797ce3..70f588efce32 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=9219a99b4f7b7c8512cccd71e06d15fc diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 index a99a59143c3e..20e64fe1d877 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=57855a2736a8db9f1db955ee8eff9f68 diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 index 8a4165bfbd3d..9ece9b4200e5 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6524b71bf3ee0d73c02c9301388b3806 diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 index accbfeb6f2bc..6464a5939eeb 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=dd885c4ec853b595e8d09da5e5237c55 diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 index 65dbb69b52fa..60fc31e08291 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3119d3d694fd7478ab452660b5ae4d25 diff --git a/metadata/md5-cache/sci-biology/hmmer-3.0 b/metadata/md5-cache/sci-biology/hmmer-3.0 index be513b92e097..1606b47e7c3f 100644 --- a/metadata/md5-cache/sci-biology/hmmer-3.0 +++ b/metadata/md5-cache/sci-biology/hmmer-3.0 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) gsl? ( >=sci-libs/gsl-1.12 ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/hmmer3/3.0/hmmer-3.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2cae24445997ef6c055ce2a697c2e91a diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index d117e0a535f6..c8400216609a 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=d1b6a914aed303aeffb28f45b2c79809 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index 46136fa3cd8a..3c98b91acafb 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=34e807b33fc0c63f6787bf849c22463c diff --git a/metadata/md5-cache/sci-biology/iqpnni-3.3.1 b/metadata/md5-cache/sci-biology/iqpnni-3.3.1 index 6961fb99c3aa..270c8740e3e8 100644 --- a/metadata/md5-cache/sci-biology/iqpnni-3.3.1 +++ b/metadata/md5-cache/sci-biology/iqpnni-3.3.1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.cibiv.at/software/iqpnni/iqpnni-3.3.1.tar.gz _eclass_exported_funcs=src_unpack:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=dc248238a134cf774f639816f37ba711 diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r1 b/metadata/md5-cache/sci-biology/kalign-2.03-r1 index 8503c94f036d..6cf61880e17d 100644 --- a/metadata/md5-cache/sci-biology/kalign-2.03-r1 +++ b/metadata/md5-cache/sci-biology/kalign-2.03-r1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=cd6a281d28847a3a6b06b4b6480d19c7 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r3 b/metadata/md5-cache/sci-biology/lagan-2.0-r3 index 3c26dd46f693..481efd5e9687 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r3 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r3 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=51daaf7838935dd5692d512982586687 diff --git a/metadata/md5-cache/sci-biology/last-230 b/metadata/md5-cache/sci-biology/last-230 index 0a89877bd21b..9222f1f3dfc2 100644 --- a/metadata/md5-cache/sci-biology/last-230 +++ b/metadata/md5-cache/sci-biology/last-230 @@ -8,5 +8,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://last.cbrc.jp/archive/last-230.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6aa3748656a0bb109728381325810807 diff --git a/metadata/md5-cache/sci-biology/last-299 b/metadata/md5-cache/sci-biology/last-299 index 664f35baedaa..125993ceab7b 100644 --- a/metadata/md5-cache/sci-biology/last-299 +++ b/metadata/md5-cache/sci-biology/last-299 @@ -9,5 +9,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://last.cbrc.jp/last-299.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=63fdd8e13d2df571e24d48edb9eb0ab9 diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050 index be26a0a27301..eca8e1ad1333 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.050 +++ b/metadata/md5-cache/sci-biology/mafft-7.050 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=801f7688176caf432098521680ab98e4 diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215 index 2dd434d58f71..3a65e36e79f5 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.215 +++ b/metadata/md5-cache/sci-biology/mafft-7.215 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=a5ad6198a26e60e10813e00447962396 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index 11af9c049a01..01662e48bd61 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=7d10b9495f44d9cbd76380a89ff731db diff --git a/metadata/md5-cache/sci-biology/mammoth-1.0-r1 b/metadata/md5-cache/sci-biology/mammoth-1.0-r1 index d7e4bb271d23..cd3bea414410 100644 --- a/metadata/md5-cache/sci-biology/mammoth-1.0-r1 +++ b/metadata/md5-cache/sci-biology/mammoth-1.0-r1 @@ -10,5 +10,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=mammoth-1.0-src.tgz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=ec1885f686d8996fc43bc556a7e9f720 diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r1 b/metadata/md5-cache/sci-biology/maq-0.7.1-r1 index 5ad645e34913..d57c1fda4ea0 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r1 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r1 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=f5f3d4b18ceb0e7841a7e5ffd2939e6b diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 index d419044bd00c..bbf0a65cba46 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 @@ -9,5 +9,5 @@ RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz _eclass_exported_funcs=src_prepare:autotools-utils src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2eb00dc303b46d118cadda5d1bdf1289 diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312 index 3f03668f94f5..786a19931005 100644 --- a/metadata/md5-cache/sci-biology/mcl-08.312 +++ b/metadata/md5-cache/sci-biology/mcl-08.312 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=86f20cc60ef5d1547df487e8647393c1 diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135 index 8e3fa5b3034f..5e06db516d16 100644 --- a/metadata/md5-cache/sci-biology/mcl-12.135 +++ b/metadata/md5-cache/sci-biology/mcl-12.135 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=86f20cc60ef5d1547df487e8647393c1 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 637286388d3d..9e446e5a1fb0 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=ddf4fd48049964197b24a486c98503f4 diff --git a/metadata/md5-cache/sci-biology/meme-4.8.1-r2 b/metadata/md5-cache/sci-biology/meme-4.8.1-r2 index 3d80d2dcca2a..da4f0537d418 100644 --- a/metadata/md5-cache/sci-biology/meme-4.8.1-r2 +++ b/metadata/md5-cache/sci-biology/meme-4.8.1-r2 @@ -10,5 +10,5 @@ RDEPEND=app-shells/tcsh dev-libs/libxml2:2 dev-libs/libxslt mpi? ( virtual/mpi ) SLOT=0 SRC_URI=http://meme.nbcr.net/downloads/meme_4.8.1.tar.gz _eclass_exported_funcs=pkg_setup:python src_prepare:- src_configure:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3da487080e0d3a3f0051709b0f0c2cb5 diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2 index da649fb61510..7031b3bc846a 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost[threads] dev-util/google-perftools SLOT=0 SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=1b2c4e0b3d28d376d63014314a1e52f1 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index c33206298968..b9f24a796cce 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz _eclass_exported_funcs=src_unpack:vcs-snapshot src_configure:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 vcs-snapshot 2b65ecb2d0f91e4322c2ac8d673993bd +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 vcs-snapshot 2b65ecb2d0f91e4322c2ac8d673993bd _md5_=0793e91c3f33532174681aade8e56eff diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index d11041450c55..329ca223300d 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=http://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=b42407a0fafab0d97c3f25952ab2fdf8 diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 index 19564ff6b1d2..ab671358ee3d 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=cbcfd648e8584c43dc080e4afca5f038 diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index f10f8ab7de72..b0db0aed5c7d 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=10613055652e0833992483376dd596e8 diff --git a/metadata/md5-cache/sci-biology/mummer-3.20 b/metadata/md5-cache/sci-biology/mummer-3.20 index 9b89f7a824a2..5415d6a72fa3 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.20 +++ b/metadata/md5-cache/sci-biology/mummer-3.20 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.20.tar.gz _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=34bc41bb6f0e306a25a82485615b429d diff --git a/metadata/md5-cache/sci-biology/mummer-3.21 b/metadata/md5-cache/sci-biology/mummer-3.21 index 08c41b9b778e..8f5a0334ee9e 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.21 +++ b/metadata/md5-cache/sci-biology/mummer-3.21 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.21.tar.gz _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=f7c3a4036f4bc40e941f2e0507d5e094 diff --git a/metadata/md5-cache/sci-biology/mummer-3.22-r1 b/metadata/md5-cache/sci-biology/mummer-3.22-r1 index 0bd16cae5624..1c849d432daa 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.22-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.22-r1 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.22.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=442826d5952762aeb80a630690097f2d diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index de15dfacb088..9c07d78b79c7 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=66098426576b0d39431bfb0549bbeafd diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 index 35821491a205..d8d2a550d66e 100644 --- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 +++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 @@ -10,5 +10,5 @@ RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontc SLOT=0 SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=18c39254e961f1799e6ad5e5408ed52e diff --git a/metadata/md5-cache/sci-biology/njplot-2.3 b/metadata/md5-cache/sci-biology/njplot-2.3 index c73717cb1dc0..6e3e494adbca 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3 +++ b/metadata/md5-cache/sci-biology/njplot-2.3 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=1dedd3c07f1b65c208b003067cd68cf0 diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r1 b/metadata/md5-cache/sci-biology/njplot-2.3-r1 index a001a054b5fb..7f7f4efb520a 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3-r1 +++ b/metadata/md5-cache/sci-biology/njplot-2.3-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=430ef4440179017c19c01eb71d3014f4 diff --git a/metadata/md5-cache/sci-biology/pals-1.0 b/metadata/md5-cache/sci-biology/pals-1.0 index 101e51069162..74ab32d60c4e 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0 +++ b/metadata/md5-cache/sci-biology/pals-1.0 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/pals-1.0.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=e0ef21df5e1b1a15fd4532b3a9d6e6b7 diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1 index 08d59a564f96..79ccef1076bd 100644 --- a/metadata/md5-cache/sci-biology/paml-4.4c-r1 +++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1 @@ -7,5 +7,5 @@ LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=a2299253a4624fe8430541631d399349 diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 index 8f970e2d2e88..d3a2891b208d 100644 --- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 +++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 @@ -9,5 +9,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=phrap-1.080812-distrib.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=afb69d253c8b277d43dcb738ddb3e9c3 diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1 index 10a9b5326069..45e2b2be4318 100644 --- a/metadata/md5-cache/sci-biology/phred-071220-r1 +++ b/metadata/md5-cache/sci-biology/phred-071220-r1 @@ -8,5 +8,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=phred-dist-071220.b-acd.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=e611bf900b7a37ed847baa138fd96bb6 diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1 index 698106dc96a1..d45125531ae1 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.69-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=fb82491d16d5f2daf7dbdac4f7a7003f diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1 index c576162a9d0d..a66d9daae697 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.696-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=cbbb1bb5348a56ae12c42eca9a00d14e diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 index 1ec3c60bc002..82bdb1d8e555 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6152894472e86fac62cd4a6e05ad553e diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index c9fefa328992..1951a45e27c9 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:java-pkg-2 src_configure:java-ant-2 src_compile:java-pkg-2 src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 java-ant-2 d1abcccd8e9c606be17deacfe5c7368a java-pkg-2 eb1f0d7d874162c70088f5ae32c31ee7 java-utils-2 a50950a73b5d5db46f42638e2996a087 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=f33422ec9832c259cea81a18a74a8503 diff --git a/metadata/md5-cache/sci-biology/piler-1.0 b/metadata/md5-cache/sci-biology/piler-1.0 index 254f1b3c5011..1c32e521ea81 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0 +++ b/metadata/md5-cache/sci-biology/piler-1.0 @@ -8,5 +8,5 @@ RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=mirror://gentoo/piler-1.0.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=21b4e96ca4b5ec6e0b82c8f783b16377 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0 b/metadata/md5-cache/sci-biology/pilercr-1.0 index 106581656011..100542c41568 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/pilercr-1.0.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=aa8c595d04f385296c2672be29f21d38 diff --git a/metadata/md5-cache/sci-biology/plink-1.07-r1 b/metadata/md5-cache/sci-biology/plink-1.07-r1 index ac7179649c45..401f4485965c 100644 --- a/metadata/md5-cache/sci-biology/plink-1.07-r1 +++ b/metadata/md5-cache/sci-biology/plink-1.07-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib lapack? ( virtual/lapack ) SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/plink/dist/plink-1.07-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=1514de2a10550eec3709c846e4e3f075 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index f3c4bd885697..b1d80da9a1ac 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=0bc8bcce219140bdc4ef2672a457932a diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 079e0d1b95df..747f6151cc57 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=c694b3bde674902a9601f856356cf311 diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603 index 01283b3f0ea3..85b4f13d2ed7 100644 --- a/metadata/md5-cache/sci-biology/prank-140603 +++ b/metadata/md5-cache/sci-biology/prank-140603 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=9614f3ce8158ee42a3cb810943e01473 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.5 b/metadata/md5-cache/sci-biology/primer3-2.3.5 index 7a9941bbc50d..edcbb6c079d2 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.5 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.5 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.5/primer3-2.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=89df84d198ccabc6e171bd151b0d86e4 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.6 b/metadata/md5-cache/sci-biology/primer3-2.3.6 index d4e471ae8c56..6c43b549b5ba 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.6 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.6/primer3-src-2.3.6.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=fbc5952f543d327fcb6b99cf43241909 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index c8906841805e..0f656e2469c0 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2d22589e3f0ecb3ac49bc9fde62ab1f2 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index 31db288d3eaa..70b51f0b8e0a 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=7832c26904cb58b1ed5527c9b9cae1c8 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39 index 7248c0cfd338..1d9e32835408 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.39 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.39 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=d6903679ef8eac2c123c4556ef80c8ec diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40 index 5a6037158cb8..488f3e772411 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.40 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.40 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5278fe0b86d8b4447a0f4492214757a0 diff --git a/metadata/md5-cache/sci-biology/psipred-3.1 b/metadata/md5-cache/sci-biology/psipred-3.1 index 994622b8d7c4..03acf543df2a 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.1 +++ b/metadata/md5-cache/sci-biology/psipred-3.1 @@ -8,5 +8,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred31.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=059ee957489f4c11d1c0946924cb3a7f diff --git a/metadata/md5-cache/sci-biology/psipred-3.2 b/metadata/md5-cache/sci-biology/psipred-3.2 index f6b63dbf50b1..4e96c6e0209e 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.2 +++ b/metadata/md5-cache/sci-biology/psipred-3.2 @@ -8,5 +8,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred32.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3048d78763d0d830803b3252e9728250 diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1 index fe29e16742c9..c1c6f72ff08b 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.2.1 +++ b/metadata/md5-cache/sci-biology/psipred-3.2.1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=2ad13218bde0c6cf5a5ab5caee939086 diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3 index c62591b6e6a5..9bcce2302cd5 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.3 +++ b/metadata/md5-cache/sci-biology/psipred-3.3 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=369220ea4bf38d546a107d8503320973 diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4 index d85b6c10669f..df69b66df05f 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.4 +++ b/metadata/md5-cache/sci-biology/psipred-3.4 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8cae719195a0bc1655657fc75a690b0f diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5 index 7bb5b7ad8c99..aa28d2d2d66c 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.5 +++ b/metadata/md5-cache/sci-biology/psipred-3.5 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 prefix 99dcca42e6528d8fe3c214bf5731aaf2 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8cae719195a0bc1655657fc75a690b0f diff --git a/metadata/md5-cache/sci-biology/pysam-0.9.0 b/metadata/md5-cache/sci-biology/pysam-0.9.0 index f003df393653..38d6ab2f1553 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.9.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.9.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.9.0.tar.gz -> pysam-0.9.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:distutils-r1 src_compile:- src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=distutils-r1 674dae153419b2200ae54e879cc65b57 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=4347b0e64a8de2968bb9d80fc701d2ea diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 index 87d69e191e60..f7f449ecf782 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl sci-biology/hmmer SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=a604c43b2c62327815727613b2748c6f diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index cf69f8936073..30d196c5f378 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6ce26877e006d2d080de7e0b2d55a7b7 diff --git a/metadata/md5-cache/sci-biology/recon-1.06-r1 b/metadata/md5-cache/sci-biology/recon-1.06-r1 index 470398751d6f..f78c32144713 100644 --- a/metadata/md5-cache/sci-biology/recon-1.06-r1 +++ b/metadata/md5-cache/sci-biology/recon-1.06-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON1.06.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5dc463aa504ef23ac98031de21caed4e diff --git a/metadata/md5-cache/sci-biology/recon-1.06-r2 b/metadata/md5-cache/sci-biology/recon-1.06-r2 index fd1ffb0cc700..8dda863190ba 100644 --- a/metadata/md5-cache/sci-biology/recon-1.06-r2 +++ b/metadata/md5-cache/sci-biology/recon-1.06-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON1.06.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=3e653eec95c5d1dbd63cd1cdc1e98b06 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index 087554afc7ac..5926f2259152 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=4c288235ce00754a3b76fa3068a818b2 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713 b/metadata/md5-cache/sci-biology/rnaview-20040713 index 7d6c88da9fbc..073a44c40377 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=fe3a0b850dcdb0fcd3c4b8ff9be47b48 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r2 b/metadata/md5-cache/sci-biology/rnaview-20040713-r2 index 043dd84134ed..a8ed7fc3f812 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r2 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r2 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=22ccaa60a98821105bd95c1f49baf5d0 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r3 b/metadata/md5-cache/sci-biology/rnaview-20040713-r3 index 0b2971307c34..e735674da019 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r3 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r3 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=e7277ead215a53f06aa591bc3dcea8a1 diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 index b96aa7e51d00..6d0ae71acac8 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-0.1.19.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=386582eb3ff9435a92dd20bdbd248cbc diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 index fa4a6c4847dc..0ee5e36a56bc 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=1e7dbcbc9661826d1b34cbe736e9f360 diff --git a/metadata/md5-cache/sci-biology/samtools-1.0 b/metadata/md5-cache/sci-biology/samtools-1.0 index 97607400cdb1..9f2386eaa094 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0 +++ b/metadata/md5-cache/sci-biology/samtools-1.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=db99b61f10fd031a95c3ba948438e007 diff --git a/metadata/md5-cache/sci-biology/samtools-1.0-r1 b/metadata/md5-cache/sci-biology/samtools-1.0-r1 index 195b02531295..47e873d17812 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=cf94159379e0b14da650368a72d518dd diff --git a/metadata/md5-cache/sci-biology/samtools-1.1 b/metadata/md5-cache/sci-biology/samtools-1.1 index 00d9abd4358b..1ab21d9bff9f 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.1 +++ b/metadata/md5-cache/sci-biology/samtools-1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.1.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=9233bca436af5041a19d8326e816d011 diff --git a/metadata/md5-cache/sci-biology/samtools-1.2 b/metadata/md5-cache/sci-biology/samtools-1.2 index 6fa39828df79..9d30b0fa44fb 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.2 +++ b/metadata/md5-cache/sci-biology/samtools-1.2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.2.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=75d7314287663a3f5ea5b17060bd2081 diff --git a/metadata/md5-cache/sci-biology/samtools-1.3-r1 b/metadata/md5-cache/sci-biology/samtools-1.3-r1 index 7a00aa903c69..36520a16a54b 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.3-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.3-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.3.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=bf4d95b9d61aabecfc5d1eb4039ebc7d diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5 index 0d43150b6aba..8babb17caa41 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.3.5 +++ b/metadata/md5-cache/sci-biology/seaview-4.3.5 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=9d788d989511d355673d31e81a3f34e8 diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4 index a36f56fd11d2..18c16a3b5652 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.5.4 +++ b/metadata/md5-cache/sci-biology/seaview-4.5.4 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6226d6428885158b7d6d73e153e2ae2f diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6 index fef795296b2d..55c6b13933b3 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6 +++ b/metadata/md5-cache/sci-biology/seaview-4.6 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=0f9003b242554f0e9834577d5eab9f40 diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index ec704d6bc293..701deef7885f 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -10,5 +10,5 @@ REQUIRED_USE=python_targets_python2_7 cpu_flags_x86_sse4_1 SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=33a44ba69cb29b108cba8aebccd91632 diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0 b/metadata/md5-cache/sci-biology/seqan-2.2.0 index 5d5ff899ebfc..27fcac106b3b 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0 +++ b/metadata/md5-cache/sci-biology/seqan-2.2.0 @@ -10,5 +10,5 @@ REQUIRED_USE=python_targets_python2_7 cpu_flags_x86_sse4_1 SLOT=2.2 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz _eclass_exported_funcs=pkg_setup:python-single-r1 src_prepare:- src_configure:- src_compile:- src_test:cmake-utils src_install:- -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=ea9c417443c0d2fb980a9595e26bbbb8 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.0.1 b/metadata/md5-cache/sci-biology/shrimp-2.0.1 index bc48cc815804..26a667e82511 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.0.1 +++ b/metadata/md5-cache/sci-biology/shrimp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/emboss !sci-mathematics/cado-nfs SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_0_1.src.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=ca9f79b1dc8cc6c457969f3bfc6dad48 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index 9755501e8177..56a1507a4ae8 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=4f8021ced803372cddeb27e1a3b6521c diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index 908652687baf..a83d99a32ebb 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=9df129026fb913d20a07f5dd4658f408 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r1 b/metadata/md5-cache/sci-biology/sim4-20030921-r1 index 8fd9a20ccfbb..1d43836abfa1 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r1 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://globin.cse.psu.edu/ftp/dist/sim4/sim4.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=e1e0b2ce50bc94c54d2fb0ef73b85af3 diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1 b/metadata/md5-cache/sci-biology/snpfile-2.0.1 index b57502afb957..6eac6b2b03bf 100644 --- a/metadata/md5-cache/sci-biology/snpfile-2.0.1 +++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=7fec83257ef5001d9827b0326638df67 diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 index 11ab585a3293..f92c51247915 100644 --- a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 +++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=18767f7f8f9a5ca8d5256c034b152bb7 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index ec72bcbef07c..14032c104d2d 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=01b4d26980038bd00786a70c9cd79963 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 index 1e25020ec197..0773d39fbcbd 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_11.00.8cbe486/T-COFFEE_distribution_Version_11.00.8cbe486.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=f6ad616b3dcf58a2f7c0551f7aea38a6 diff --git a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 index fe3e5c41a9f0..f72faece353b 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align virtual/fortran SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_9.03.r1318/T-COFFEE_distribution_Version_9.03.r1318.tar.gz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=d6f0c1f80bcc0790b5e24d8e96f831bb diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r3 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r3 index 0576093c2143..647d354c5d47 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r3 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=0182a9a0e1edc7fff427a466a0747e4e diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index 8ffdd100ecb0..404128051ebd 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=9eb444bfbd258f8fbff3201843269bca diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 index 7fbe2d50fba5..2e8e411a666a 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/wxGTK:2.8[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 _md5_=463bdbd7d7491edb402c46e04872d6d4 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index af9a4b405346..c4c33103bf68 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 _md5_=cbf86de4abb9b8d3fbfb16e42adc12ba diff --git a/metadata/md5-cache/sci-biology/trf-4.04 b/metadata/md5-cache/sci-biology/trf-4.04 index 43852fcda00a..c9c84e931860 100644 --- a/metadata/md5-cache/sci-biology/trf-4.04 +++ b/metadata/md5-cache/sci-biology/trf-4.04 @@ -8,5 +8,5 @@ RESTRICT=mirror bindist SLOT=0 SRC_URI=http://tandem.bu.edu/trf/downloads/trf404.linux _eclass_exported_funcs=src_unpack:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=406c2b2b8a1c6b562b03f9449a9ff93c diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 b/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 index 3c33044486a8..95f4d5845ad9 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=mirror://gentoo/trnascan-se-1.23.tar.bz2 _eclass_exported_funcs=src_prepare:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=058be692c482156e6c3af40ff90b77f3 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index 43c069b42baa..31f492a6914c 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl:=[-build(-)] SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz _eclass_exported_funcs=src_unpack:unpacker src_prepare:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be _md5_=439f7437ebed7cc03c5bda708d926e42 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 1c90036f0012..af83d1c63f63 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -9,5 +9,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils f3d38665b0a86e08ba3a5473cdbfafd3 eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=4ce1a7d2ea0e053f87b43de98d267b9c diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 index e22822947b30..947c2a6b79b4 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 @@ -11,5 +11,5 @@ REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:- pkg_setup:webapp src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 webapp 42c6ef7af496b228f9854b3c81e4b226 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 webapp 42c6ef7af496b228f9854b3c81e4b226 _md5_=291204ab910d7f2b77d52afc8fcb6675 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8 b/metadata/md5-cache/sci-biology/unafold-3.8 index cd59da517080..a8e0c29cf7a0 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8 +++ b/metadata/md5-cache/sci-biology/unafold-3.8 @@ -7,5 +7,5 @@ LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=2d1fd089d7fa16c17dc630855c23d919 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index 0b16c6480fc9..0e4fb91f2637 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -8,5 +8,5 @@ LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 _eclass_exported_funcs=src_prepare:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5a329c11948ef9c2c8a9dc980c9b5d8e diff --git a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 index c24b7ed1ffd4..c53498223298 100644 --- a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 +++ b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl !sci-biology/ncbi-tools++ SLOT=0 SRC_URI=ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/ARCHIVE/12_0_0/ncbi_cxx--12_0_0.tar.gz _eclass_exported_funcs=src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=5b182e435bf1a57f378721081bcde2f0 diff --git a/metadata/md5-cache/sci-biology/vaal-46233 b/metadata/md5-cache/sci-biology/vaal-46233 index 66bdb1332748..00b55b782d56 100644 --- a/metadata/md5-cache/sci-biology/vaal-46233 +++ b/metadata/md5-cache/sci-biology/vaal-46233 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/boost-1.41.0-r3 SLOT=0 SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=0ad9661449bafe761159d8c78957d756 diff --git a/metadata/md5-cache/sci-biology/vaal-46233-r2 b/metadata/md5-cache/sci-biology/vaal-46233-r2 index 37a6dca751f5..4d73135e95b3 100644 --- a/metadata/md5-cache/sci-biology/vaal-46233-r2 +++ b/metadata/md5-cache/sci-biology/vaal-46233-r2 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/allpathslg SLOT=0 SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=a1c2d330ae12a66a3df20e7f8cd20509 diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index 3fb6af2670e5..1a260eedf8c9 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 perl-functions aac50de73be0a80ebe780e0b20850130 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 perl-functions aac50de73be0a80ebe780e0b20850130 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=f478579fae686acfaa9a179242a06188 diff --git a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 index 1754e885b13a..98cab9f4b91a 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 +++ b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.0.18.tgz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=c6306e29894355e18255d2d534627ead diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 538229bad200..a572c6aaa19f 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=6c8dee8e74b9fb4e57c4bc7e7bc7c782 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index 62f4963d5a05..ce9f543c90c5 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=6d978aca9747776d0b4fb8d647081e1e diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index b8e99753a256..1ca969d601ee 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 674dae153419b2200ae54e879cc65b57 eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib 165fc17c38d1b11dac2008280dab6e80 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 1797277ea0e7cee5c7de7ce74cf8acd8 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 unpacker 45d07319df5f40ee6af58418b0f930be xdg-utils e2b2bd56125ce8cf59ce30c642b59d48 _md5_=f3373f37e05509bac04eae39f236e5cc diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-5.4 b/metadata/md5-cache/sci-biology/wgs-assembler-5.4 index ea2fe38ef87d..6fb3508a7e4e 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-5.4 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-5.4 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-5.4.tar.bz2 _eclass_exported_funcs=src_configure:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=4745bb7a37e63e51bd8b19b213ce9b71 diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-6.1 b/metadata/md5-cache/sci-biology/wgs-assembler-6.1 index 4817e50d3f08..8db72deb6404 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-6.1 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-6.1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-6.1.tar.bz2 _eclass_exported_funcs=src_configure:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=4a5470f6cd833930285921add95a6ff6 diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0 index 6278a93b163b..e52ffd3f8c20 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 _eclass_exported_funcs=src_configure:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5b5c0507954c94c857d321264b23656b diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 index ae86a86867e1..72889aaa5a97 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_compile:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=c4d83da689431ab93d575e326ee07e1d diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha index 0ac14c8710ee..981ed6c006f4 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha @@ -10,5 +10,5 @@ RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils b83a2420b796f7c6eff682679d08fe25 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8eee710efb6992b2ba447f3f5b941f08 diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index c403070d681c..cb5ea7f8644f 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -10,5 +10,5 @@ RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 1b1da0c45c555989dc5d832b54880783 _md5_=5b1274fdf102f9e339c65b66756f9e51 |