2020-08-03 17:05:38 UTC

6 files changed, 66 insertions, 21 deletions

diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
new file mode 100644
index 000000000000..458704500492
--- /dev/null
+++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4
@@ -0,0 +1,15 @@
+BDEPEND=>=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+DEFINED_PHASES=compile configure install prepare test
+DEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+DESCRIPTION=Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files
+EAPI=7
+HOMEPAGE=https://htseq.readthedocs.io/
+IUSE=python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
+KEYWORDS=~amd64
+LICENSE=GPL-3+
+RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 )
+SLOT=0
+SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz
+_eclasses_=distutils-r1	0dda1d9008ac0b2530588115a772d99d	multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=ed6a76d098be1d996f372cc4a1949747
diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.9.1 b/metadata/md5-cache/sci-biology/HTSeq-0.9.1
deleted file mode 100644
index f3414c7797e8..000000000000
--- a/metadata/md5-cache/sci-biology/HTSeq-0.9.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-DESCRIPTION=Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files
-EAPI=6
-HOMEPAGE=https://htseq.readthedocs.io/
-IUSE=python_targets_python3_6
-KEYWORDS=~amd64
-LICENSE=GPL-3+
-RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python3_6 )
-SLOT=0
-SRC_URI=mirror://pypi/H/HTSeq/HTSeq-0.9.1.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	0dda1d9008ac0b2530588115a772d99d	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	fcb2aa98e1948b835b5ae66ca52868c5	ltprune	2729691420b6deeda2a90b1f1183fb55	multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=1a7e20f6705425c8dc29ce2c240db0b2
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index 666118424082..30e57b33be29 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -1,13 +1,14 @@
+BDEPEND=>=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-vcs/git-1.8.2.1[curl]
 DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-vcs/git-1.8.2.1[curl]
+DEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
 DESCRIPTION=Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files
-EAPI=6
+EAPI=7
 HOMEPAGE=https://htseq.readthedocs.io/
-IUSE=python_targets_python3_6
+IUSE=python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
 LICENSE=GPL-3+
 PROPERTIES=live
-RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/matplotlib[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] sci-biology/pysam[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python3_6 )
+RDEPEND=dev-python/numpy[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 )
 SLOT=0
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	0dda1d9008ac0b2530588115a772d99d	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	fcb2aa98e1948b835b5ae66ca52868c5	git-r3	8ec5b53812bce105ae7943930e4660f8	ltprune	2729691420b6deeda2a90b1f1183fb55	multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=1a7e20f6705425c8dc29ce2c240db0b2
+_eclasses_=distutils-r1	0dda1d9008ac0b2530588115a772d99d	git-r3	8ec5b53812bce105ae7943930e4660f8	multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=ed6a76d098be1d996f372cc4a1949747
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.10.2 b/metadata/md5-cache/sci-biology/bcftools-1.10.2
new file mode 100644
index 000000000000..a01a44ea47b1
--- /dev/null
+++ b/metadata/md5-cache/sci-biology/bcftools-1.10.2
@@ -0,0 +1,14 @@
+DEFINED_PHASES=configure prepare setup
+DEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) =sci-libs/htslib-1.10.2*:= sys-libs/zlib:= python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_9? ( dev-lang/python:3.9 >=dev-lang/python-exec-2:=[python_targets_python3_9] )
+DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files
+EAPI=7
+HOMEPAGE=http://www.htslib.org
+IUSE=python_single_target_python3_6 python_single_target_python3_7 python_single_target_python3_8 python_single_target_python3_9
+KEYWORDS=~amd64 ~x86
+LICENSE=MIT
+RDEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) =sci-libs/htslib-1.10.2*:= sys-libs/zlib:= python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] ) python_single_target_python3_8? ( dev-lang/python:3.8 >=dev-lang/python-exec-2:=[python_targets_python3_8] ) python_single_target_python3_9? ( dev-lang/python:3.9 >=dev-lang/python-exec-2:=[python_targets_python3_9] )
+REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7 python_single_target_python3_8 python_single_target_python3_9 )
+SLOT=0
+SRC_URI=https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2
+_eclasses_=multilib	2477ebe553d3e4d2c606191fe6c33602	python-single-r1	674c48c926cbb44e91b656e0399d8f54	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=ac6cc22f29007163af34c271cc6e7143
diff --git a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
new file mode 100644
index 000000000000..69f77db8b33d
--- /dev/null
+++ b/metadata/md5-cache/sci-biology/pysam-0.16.0.1
@@ -0,0 +1,16 @@
+BDEPEND=test? ( =sci-biology/bcftools-1.10* =sci-biology/samtools-1.10* ) test? ( =sci-libs/htslib-1.10*:= >=dev-python/pytest-4.5.0[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] ) python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+DEFINED_PHASES=compile configure install prepare test
+DEPEND==sci-libs/htslib-1.10*:= dev-python/cython[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/setuptools[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+DESCRIPTION=Python interface for the SAM/BAM sequence alignment and mapping format
+EAPI=7
+HOMEPAGE=https://github.com/pysam-developers/pysam https://pypi.org/project/pysam/
+IUSE=test python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
+KEYWORDS=~amd64 ~x86
+LICENSE=MIT
+RDEPEND==sci-libs/htslib-1.10*:= python_targets_python3_6? ( dev-lang/python:3.6 ) python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_6(-),-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)]
+REQUIRED_USE=|| ( python_targets_python3_6 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 )
+RESTRICT=!test? ( test )
+SLOT=0
+SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.16.0.1.tar.gz -> pysam-0.16.0.1.tar.gz
+_eclasses_=distutils-r1	0dda1d9008ac0b2530588115a772d99d	multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	multiprocessing	cac3169468f893670dac3e7cb940e045	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=c0f872ce3ed106718898376443d0cfe6
diff --git a/metadata/md5-cache/sci-biology/samtools-1.10 b/metadata/md5-cache/sci-biology/samtools-1.10
new file mode 100644
index 000000000000..8455d6004cf3
--- /dev/null
+++ b/metadata/md5-cache/sci-biology/samtools-1.10
@@ -0,0 +1,13 @@
+BDEPEND=virtual/pkgconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
+DEFINED_PHASES=compile configure install prepare test
+DEPEND=dev-lang/perl =sci-libs/htslib-1.10* sys-libs/ncurses:0=[unicode] sys-libs/zlib:=
+DESCRIPTION=Utilities for analysing and manipulating the SAM/BAM alignment formats
+EAPI=7
+HOMEPAGE=http://www.htslib.org/
+KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
+LICENSE=MIT
+RDEPEND=dev-lang/perl =sci-libs/htslib-1.10* sys-libs/ncurses:0=[unicode] sys-libs/zlib:=
+SLOT=0
+SRC_URI=mirror://sourceforge/samtools/samtools-1.10.tar.bz2
+_eclasses_=autotools	7d999b62b8749fad43fff00620cedf47	libtool	f143db5a74ccd9ca28c1234deffede96	multilib	2477ebe553d3e4d2c606191fe6c33602	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
+_md5_=67d56fa48d3a475403ad1a726690e370