proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

3 files changed, 112 insertions, 0 deletions

diff --git a/dev-python/scientificpython/files/scientificpython-2.9-mpi.patch b/dev-python/scientificpython/files/scientificpython-2.9-mpi.patch
new file mode 100644
index 000000000000..3140779c74a9
--- /dev/null
+++ b/dev-python/scientificpython/files/scientificpython-2.9-mpi.patch
@@ -0,0 +1,40 @@
+--- Src/MPI/compile.py
++++ Src/MPI/compile.py
+@@ -4,7 +4,7 @@
+ # Normally nothing needs to be changed below
+ import distutils
+ import distutils.sysconfig
+-import os, sys
++import os, subprocess, sys
+ from Scientific import N
+ 
+ cfgDict = distutils.sysconfig.get_config_vars()
+@@ -32,16 +32,16 @@
+             items[i] = os.path.join(frameworkdir[0], items[i])
+     linkforshared = ' '.join(items)
+ 
+-cmd = '%s %s -o mpipython -I%s %s %s -L%s -lpython%s %s %s' % \
+-    (mpicompiler, 
+-     linkforshared,
+-     cfgDict['INCLUDEPY'],
+-     extra_compile_args,
+-     sources,
+-     cfgDict['LIBPL'],
+-     cfgDict['VERSION'], 
+-     cfgDict['LIBS'], 
+-     cfgDict['LIBM'])
++cmd = [mpicompiler]
++cmd.extend(linkforshared.split())
++cmd.extend(os.environ.get("CFLAGS", "").split())
++cmd.extend(os.environ.get("LDFLAGS", "").split())
++cmd.extend(["-o", "mpipython"])
++cmd.extend(["-I" + x for x in cfgDict['INCLUDEPY'].split()])
++cmd.extend(["-I../../Include"])
++cmd.extend(extra_compile_args.split())
++cmd.extend(sources.split())
++cmd.extend(["-lpython%s" % cfgDict['VERSION']])
+ 
+-print 'cmd = ', cmd 
+-os.system(cmd)
++print 'cmd =', " ".join(cmd)
++sys.exit(subprocess.call(cmd))
diff --git a/dev-python/scientificpython/files/scientificpython-2.9.1-mpi-netcdf.patch b/dev-python/scientificpython/files/scientificpython-2.9.1-mpi-netcdf.patch
new file mode 100644
index 000000000000..622032d4d174
--- /dev/null
+++ b/dev-python/scientificpython/files/scientificpython-2.9.1-mpi-netcdf.patch
@@ -0,0 +1,29 @@
+--- setup.py
++++ setup.py
+@@ -2,7 +2,7 @@
+ 
+ from distutils.core import setup, Extension
+ from distutils.command.install_headers import install_headers
+-import os, sys, platform
++import os, sys, platform, subprocess
+ from glob import glob
+ 
+ class Dummy:
+@@ -103,13 +103,16 @@
+         netcdf_include = os.path.join(netcdf_prefix, 'include')
+         netcdf_h_file = os.path.join(netcdf_prefix, 'include', 'netcdf.h')
+         netcdf_lib = os.path.join(netcdf_prefix, 'lib')
++        mpi_cflags = subprocess.Popen(["mpicc", "-showme:compile"], stdout=subprocess.PIPE).communicate()[0].rstrip().split()
++        mpi_ldflags = subprocess.Popen(["mpicc", "-showme:link"], stdout=subprocess.PIPE).communicate()[0].rstrip().split()
+     ext_modules = [Extension('Scientific_netcdf',
+                              ['Src/Scientific_netcdf.c'],
+                              include_dirs=['Include', netcdf_include]
+                                           + arrayobject_h_include,
+                              library_dirs=[netcdf_lib],
+                              libraries = ['netcdf'],
+-                             extra_compile_args=extra_compile_args)]
++                             extra_compile_args=extra_compile_args + mpi_cflags,
++                             extra_link_args=mpi_ldflags)]
+ 
+ try:
+     # Add code for including documentation in Mac packages
diff --git a/dev-python/scientificpython/files/scientificpython-2.9.3-mpi-netcdf.patch b/dev-python/scientificpython/files/scientificpython-2.9.3-mpi-netcdf.patch
new file mode 100644
index 000000000000..c9672948f2f8
--- /dev/null
+++ b/dev-python/scientificpython/files/scientificpython-2.9.3-mpi-netcdf.patch
@@ -0,0 +1,43 @@
+From 71a5e881290c1cec2506a346e2740a1b821c36aa Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Micha=C5=82=20G=C3=B3rny?= <mgorny@gentoo.org>
+Date: Thu, 13 Mar 2014 15:29:33 +0100
+Subject: [PATCH] Include MPI cflags/ldflags for netcdf.
+
+---
+ setup.py | 7 +++++--
+ 1 file changed, 5 insertions(+), 2 deletions(-)
+
+diff --git a/setup.py b/setup.py
+index 7f01656..71ac92a 100644
+--- a/setup.py
++++ b/setup.py
+@@ -2,7 +2,7 @@
+ 
+ from distutils.core import setup, Extension
+ from distutils.command.install_headers import install_headers
+-import os, sys, platform
++import os, sys, platform, subprocess
+ from glob import glob
+ 
+ class Dummy:
+@@ -92,13 +92,16 @@ else:
+         netcdf_include = os.path.join(netcdf_prefix, 'include')
+         netcdf_h_file = os.path.join(netcdf_prefix, 'include', 'netcdf.h')
+         netcdf_lib = os.path.join(netcdf_prefix, 'lib')
++    mpi_cflags = subprocess.Popen(["mpicc", "-showme:compile"], stdout=subprocess.PIPE).communicate()[0].rstrip().split()
++    mpi_ldflags = subprocess.Popen(["mpicc", "-showme:link"], stdout=subprocess.PIPE).communicate()[0].rstrip().split()
+     ext_modules = [Extension('Scientific._netcdf',
+                              ['Scientific/_netcdf.c'],
+                              include_dirs=['Include', netcdf_include]
+                                           + numpy_include,
+                              library_dirs=[netcdf_lib],
+                              libraries = ['netcdf'],
+-                             extra_compile_args=extra_compile_args)]
++                             extra_compile_args=extra_compile_args + mpi_cflags,
++                             extra_link_args=mpi_ldflags)]
+ 
+ try:
+     # Add code for including documentation in Mac packages
+-- 
+1.9.0
+