2021-10-21 10:06:39 UTC

10 files changed, 35 insertions, 57 deletions

diff --git a/metadata/md5-cache/sci-astronomy/ds9-bin-7.2 b/metadata/md5-cache/sci-astronomy/ds9-bin-7.2
deleted file mode 100644
index 18dbb563f0b2..000000000000
--- a/metadata/md5-cache/sci-astronomy/ds9-bin-7.2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=install
-DESCRIPTION=Data visualization application for astronomical FITS images
-EAPI=5
-HOMEPAGE=http://hea-www.harvard.edu/RD/ds9
-INHERIT=eutils
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=dev-libs/libxml2 media-libs/fontconfig media-libs/freetype x11-libs/libX11 x11-libs/libXScrnSaver x11-libs/libXext x11-libs/libXft x11-libs/libXrandr x11-libs/libXrender x11-libs/xpa
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~jlec/distfiles/ds9.png.tar amd64? ( http://hea-www.harvard.edu/RD/ds9/download/linux64/ds9.linux64.7.2.tar.gz ) x86? ( http://hea-www.harvard.edu/RD/ds9/download/linux/ds9.linux.7.2.tar.gz )
-_eclasses_=desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff
-_md5_=27ce466177724038d75eb4e9d803f87d
diff --git a/metadata/md5-cache/sci-astronomy/ds9-bin-7.4 b/metadata/md5-cache/sci-astronomy/ds9-bin-7.4
index ae6b39766403..2107213e8b4a 100644
--- a/metadata/md5-cache/sci-astronomy/ds9-bin-7.4
+++ b/metadata/md5-cache/sci-astronomy/ds9-bin-7.4
@@ -1,12 +1,12 @@
 DEFINED_PHASES=install
 DESCRIPTION=Data visualization application for astronomical FITS images
-EAPI=6
+EAPI=8
 HOMEPAGE=http://ds9.si.edu/site/Home.html
-INHERIT=eutils
+INHERIT=desktop
 KEYWORDS=~amd64 ~amd64-linux
 LICENSE=GPL-2
 RDEPEND=dev-libs/libxml2 media-libs/fontconfig media-libs/freetype x11-libs/libX11 x11-libs/libXScrnSaver x11-libs/libXext x11-libs/libXft x11-libs/libXrandr x11-libs/libXrender x11-libs/xpa
 SLOT=0
 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/ds9.png.tar amd64? ( http://ds9.si.edu/download/linux64/ds9.linux64.7.4.tar.gz ) x86? ( http://hea-www.harvard.edu/RD/ds9/download/linux/ds9.linux.7.4.tar.gz )
-_eclasses_=desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff
-_md5_=0473f3c3811ef627bcbae43a08f391cb
+_eclasses_=desktop	c0d27bf73aa08ca05b663dbd31fbef28
+_md5_=63f22d7fdc2667b8ea92f26fd41b3476
diff --git a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1 b/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1
index a9634ea7dda0..25b128d2f935 100644
--- a/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1
+++ b/metadata/md5-cache/sci-chemistry/cluster-1.3.081231-r1
@@ -1,11 +1,11 @@
-DEFINED_PHASES=install prepare
+DEFINED_PHASES=configure install
 DESCRIPTION=Build lists of collections of interacting items
-EAPI=5
+EAPI=8
 HOMEPAGE=http://kinemage.biochem.duke.edu/software/index.php
-INHERIT=epatch toolchain-funcs
+INHERIT=toolchain-funcs
 KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
 LICENSE=richardson
 SLOT=0
 SRC_URI=http://kinemage.biochem.duke.edu/downloads/software/cluster/cluster.1.3.081231.src.tgz
-_eclasses_=estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988
-_md5_=fb17631f6e2f355df6013da7e9cd21df
+_eclasses_=toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988
+_md5_=268abf9ec98b541a31b65182ab2e3413
diff --git a/metadata/md5-cache/sci-electronics/Stage-4.3.0 b/metadata/md5-cache/sci-electronics/Stage-4.3.0
deleted file mode 100644
index 14c75fe34b57..000000000000
--- a/metadata/md5-cache/sci-electronics/Stage-4.3.0
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=dev-libs/libltdl:0 virtual/jpeg:0 media-libs/libpng:0= sys-libs/zlib:0= x11-libs/fltk[opengl] virtual/glu virtual/opengl virtual/pkgconfig sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=The Stage Robot Simulator
-EAPI=5
-HOMEPAGE=http://rtv.github.io/Stage/
-INHERIT=cmake-utils
-KEYWORDS=~amd64
-LICENSE=GPL-2
-RDEPEND=dev-libs/libltdl:0 virtual/jpeg:0 media-libs/libpng:0= sys-libs/zlib:0= x11-libs/fltk[opengl] virtual/glu virtual/opengl
-SLOT=0/4.3
-SRC_URI=https://github.com/rtv/Stage/archive/v4.3.0.tar.gz -> Stage-4.3.0.tar.gz
-_eclasses_=toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	multiprocessing	61c959fc55c15c00bbb1079d6a71370b	ninja-utils	a4dab848a4490e8e48cf0baab3e61bc2	desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff	flag-o-matic	4134b5c0fb719b9161d10bdaba9e09e5	xdg-utils	27f9a2f19502b925ac117bd657aa2979	cmake-utils	f40ef5c4fb8eda19cca8d6604bef497e
-_md5_=93705182de49ed62958cc7e5c902e6f5
diff --git a/metadata/md5-cache/sci-electronics/Stage-4.3.0-r1 b/metadata/md5-cache/sci-electronics/Stage-4.3.0-r1
new file mode 100644
index 000000000000..b749f65e9b01
--- /dev/null
+++ b/metadata/md5-cache/sci-electronics/Stage-4.3.0-r1
@@ -0,0 +1,14 @@
+BDEPEND=virtual/pkgconfig dev-util/ninja >=dev-util/cmake-3.20.5
+DEFINED_PHASES=compile configure install prepare test
+DEPEND=dev-libs/libltdl:0 media-libs/libpng:0= sys-libs/zlib:0= x11-libs/fltk[opengl] virtual/glu virtual/jpeg:0 virtual/opengl
+DESCRIPTION=The Stage Robot Simulator
+EAPI=8
+HOMEPAGE=http://rtv.github.io/Stage/
+INHERIT=cmake
+KEYWORDS=~amd64
+LICENSE=GPL-2
+RDEPEND=dev-libs/libltdl:0 media-libs/libpng:0= sys-libs/zlib:0= x11-libs/fltk[opengl] virtual/glu virtual/jpeg:0 virtual/opengl
+SLOT=0/4.3
+SRC_URI=https://github.com/rtv/Stage/archive/v4.3.0.tar.gz -> Stage-4.3.0.tar.gz
+_eclasses_=toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	flag-o-matic	4134b5c0fb719b9161d10bdaba9e09e5	multiprocessing	61c959fc55c15c00bbb1079d6a71370b	ninja-utils	a4dab848a4490e8e48cf0baab3e61bc2	xdg-utils	27f9a2f19502b925ac117bd657aa2979	cmake	11fee991ab428a3370e5c20fa8231fb6
+_md5_=d8f136297c0aec65c3df0220ce8bc73b
diff --git a/metadata/md5-cache/sci-electronics/Stage-9999 b/metadata/md5-cache/sci-electronics/Stage-9999
deleted file mode 100644
index 59066ef60567..000000000000
--- a/metadata/md5-cache/sci-electronics/Stage-9999
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=dev-libs/libltdl:0 virtual/jpeg:0 media-libs/libpng:0= sys-libs/zlib:0= x11-libs/fltk[opengl] virtual/glu virtual/opengl virtual/pkgconfig >=dev-vcs/git-1.8.2.1[curl] sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=The Stage Robot Simulator
-EAPI=5
-HOMEPAGE=http://rtv.github.io/Stage/
-INHERIT=git-r3 cmake-utils
-LICENSE=GPL-2
-PROPERTIES=live
-RDEPEND=dev-libs/libltdl:0 virtual/jpeg:0 media-libs/libpng:0= sys-libs/zlib:0= x11-libs/fltk[opengl] virtual/glu virtual/opengl
-SLOT=0/4.3
-_eclasses_=git-r3	cc875b0c1e9b3bdac1af0f82f3ba29da	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	multiprocessing	61c959fc55c15c00bbb1079d6a71370b	ninja-utils	a4dab848a4490e8e48cf0baab3e61bc2	desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff	flag-o-matic	4134b5c0fb719b9161d10bdaba9e09e5	xdg-utils	27f9a2f19502b925ac117bd657aa2979	cmake-utils	f40ef5c4fb8eda19cca8d6604bef497e
-_md5_=419c0d6c92b73cdb42ca0c1b61e0c99b
diff --git a/metadata/md5-cache/sci-libs/cgcode-1.0-r2 b/metadata/md5-cache/sci-libs/cgcode-1.0-r2
index 98cf6e2c4299..07c04e50235f 100644
--- a/metadata/md5-cache/sci-libs/cgcode-1.0-r2
+++ b/metadata/md5-cache/sci-libs/cgcode-1.0-r2
@@ -1,13 +1,14 @@
+BDEPEND=virtual/pkgconfig virtual/fortran
 DEFINED_PHASES=install prepare setup
-DEPEND=virtual/blas virtual/pkgconfig virtual/fortran
+DEPEND=virtual/blas virtual/fortran
 DESCRIPTION=Conjugate gradient Codes for large sparse linear systems
-EAPI=5
+EAPI=8
 HOMEPAGE=http://fetk.org/codes/cgcode/index.html
-INHERIT=epatch fortran-2 flag-o-matic toolchain-funcs
+INHERIT=fortran-2 flag-o-matic toolchain-funcs
 KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
 LICENSE=GPL-2
 RDEPEND=virtual/blas virtual/fortran
 SLOT=0
 SRC_URI=http://www.fetk.org/codes/download/cgcode-1.0.tar.gz
-_eclasses_=estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff	fortran-2	7e39eb204d37699d5f1eaf9f4d61888a	flag-o-matic	4134b5c0fb719b9161d10bdaba9e09e5
-_md5_=a08942d709e164cb4c51986f278fc202
+_eclasses_=toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	fortran-2	7e39eb204d37699d5f1eaf9f4d61888a	flag-o-matic	4134b5c0fb719b9161d10bdaba9e09e5
+_md5_=2f27d13f006390701c54a0b7e01851d8
diff --git a/metadata/md5-cache/sci-libs/clashscore-db-3.17 b/metadata/md5-cache/sci-libs/clashscore-db-3.17-r1
index fe1e0dd24ff6..7517e1baec25 100644
--- a/metadata/md5-cache/sci-libs/clashscore-db-3.17
+++ b/metadata/md5-cache/sci-libs/clashscore-db-3.17-r1
@@ -1,10 +1,10 @@
 DEFINED_PHASES=install
 DESCRIPTION=Clashscore-db for clashlist
-EAPI=5
+EAPI=8
 HOMEPAGE=http://kinemage.biochem.duke.edu/
 KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
 LICENSE=richardson
 RESTRICT=binchecks strip
 SLOT=0
 SRC_URI=mirror://gentoo/molprobity-3.17.tgz
-_md5_=8e50cf9b659f262273d93489c3a0baed
+_md5_=39e50ab41a6b38f2ab4a7dab306abe4b
diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index
index ae14cc8c9afa..5df725aacd78 100644
--- a/metadata/pkg_desc_index
+++ b/metadata/pkg_desc_index
@@ -16131,7 +16131,7 @@ sci-astronomy/casa-data 20170703: Data and tables for the CASA software
 sci-astronomy/cdsclient 3.8.4: Collection of scripts to access the CDS databases
 sci-astronomy/celestia 1.7.0_pre20200316-r100 9999: OpenGL 3D space simulator
 sci-astronomy/cpl 7.0-r1: ESO common pipeline library for astronomical data reduction
-sci-astronomy/ds9-bin 7.2 7.4: Data visualization application for astronomical FITS images
+sci-astronomy/ds9-bin 7.4: Data visualization application for astronomical FITS images
 sci-astronomy/erfa 1.4.0: Essential Routines for Fundamental Astronomy
 sci-astronomy/esomidas 17.02-r1: European Southern Observatory Munich Image Data Analysis System
 sci-astronomy/esorex 3.12.3: ESO Recipe Execution Tool to exec cpl scripts
@@ -16373,7 +16373,7 @@ sci-chemistry/votca-xtp 1.6.4 2021 2021.1 2021.2 9999: Votca excitation and char
 sci-chemistry/wxmacmolplt 7.5-r1: Chemical 3D graphics program with GAMESS input builder
 sci-chemistry/xds-bin 20170930: Software for processing single-crystal X-ray monochromatic diffraction data
 sci-chemistry/xyza2pipe 20121001: Cross conversion environment of NMR spectra
-sci-electronics/Stage 4.3.0 9999: The Stage Robot Simulator
+sci-electronics/Stage 4.3.0-r1: The Stage Robot Simulator
 sci-electronics/drahnr-oregano 0.84.40: Application for the schematic capturing and simulation of electrical circuits
 sci-electronics/eagle 7.7.0-r1: CadSoft EAGLE schematic and printed circuit board (PCB) layout editor
 sci-electronics/electric 9.03: Complete Electronic Design Automation system for many forms of circuit design
@@ -16525,7 +16525,7 @@ sci-libs/cgnslib 3.4.0: CFD General Notation System standard library
 sci-libs/cholmod 3.0.13 3.0.14: Sparse Cholesky factorization and update/downdate library
 sci-libs/cifparse-obj 7.105: Provides an object-oriented application interface to information in mmCIF format
 sci-libs/clapack 3.2.1-r8: f2c'ed version of LAPACK
-sci-libs/clashscore-db 3.17: Clashscore-db for clashlist
+sci-libs/clashscore-db 3.17-r1: Clashscore-db for clashlist
 sci-libs/clblas 2.12: Library containing BLAS routines for OpenCL
 sci-libs/clblast 0.10.0: Tuned OpenCL BLAS
 sci-libs/cln 1.3.6: Class library (C++) for numbers
diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk
index 90e6816880f6..cc140c3f1a53 100644
--- a/metadata/timestamp.chk
+++ b/metadata/timestamp.chk
@@ -1 +1 @@
-Thu, 21 Oct 2021 08:06:35 +0000
+Thu, 21 Oct 2021 10:06:39 +0000