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* x86 stable, see bug 328437Andreas Schuerch2012-11-133-5/+19
* Stable for amd64, wrt bug #328437Agostino Sarubbo2012-11-113-15/+8
* Stable for amd64, wrt bug #441020Agostino Sarubbo2012-11-103-15/+8
* sci-biology/wgs-assembler: Respect LDFLAGS, #331935; fix linking with gold; h...Justin Lecher2012-11-107-22/+335
* Update ChangeLogJustin Lecher2012-11-102-6/+6
* sci-biology/cufflinks: Drop hard version dep for boost, #440630, and fix comp...Justin Lecher2012-11-106-28/+1412
* sci-biology/express: Keyworded for ~x86; drop needless version restriction of...Justin Lecher2012-11-093-16/+17
* sci-biology/qrna: Move to EAPI=4Justin Lecher2012-11-093-44/+44
* sci-biology/allpaths: Fix for latest boost, #421727; fix for additional probl...Justin Lecher2012-11-087-22/+662
* sci-biology/mira: Version Bump, #377807Justin Lecher2012-11-076-11/+107
* sci-biology/mira: Fix for boost >1.50, #425468Justin Lecher2012-11-075-16/+138
* sci-biology/ncbi-tools++: Correct patch naming againJustin Lecher2012-11-053-15/+18
* sci-biology/ncbi-tools++: Correct for new version numberJustin Lecher2012-11-033-13/+17
* sci-biology/bioperl-run: Dropped oldJustin Lecher2012-11-023-64/+16
* sci-biology/ncbi-tools++: Drop old, duplicate with lower version number for n...Justin Lecher2012-11-023-23/+39
* QA: drop maximum boost version dep; if it fails to build, it has to be fixed.Diego Elio Pettenò2012-10-313-15/+21
* Avoid using a slot depend since now boost is unslotted.Diego Elio Pettenò2012-10-313-13/+19
* Avoid using a slot depend since now boost is unslotted; remove pointless filt...Diego Elio Pettenò2012-10-313-15/+21
* sci-biology/bioperl: Drop versions with unsolvable dep setsJustin Lecher2012-10-284-144/+16
* Update dependency after package move from x11-libs/openmotif to x11-libs/motif.Ulrich Müller2012-10-2419-82/+139
* sci-biology/mammoth: Remove virtual/fortran and always call fortran-2_pkg_set...Justin Lecher2012-10-194-20/+21
* sci-biology/shrimp: Vesion BumpJustin Lecher2012-10-183-5/+76
* sci-biology/shrimp: Do not install elf in usr/share, #438652Justin Lecher2012-10-185-79/+49
* sci-biology/seaview: Drop oldJustin Lecher2012-10-183-83/+9
* sci-biology/glimmerhmm: Drop oldJustin Lecher2012-10-183-54/+9
* x86 stable wrt bug #430524Paweł Hajdan2012-10-173-5/+19
* x86 stable wrt bug #432366Paweł Hajdan2012-10-173-5/+18
* sci-biology/trf: Drop old; move to EAPI=4; use QA_PREBUILT, #436718Justin Lecher2012-10-064-53/+29
* Version bump, remove oldAndrey Kislyuk2012-10-055-84/+22
* Version bump, remove old, add git depAndrey Kislyuk2012-09-304-58/+19
* QA_DT_HASH (old/deprecated) -> QA_FLAGS_IGNORED (new hotness).Mike Frysinger2012-09-244-18/+32
* Stable for amd64, wrt bug #430524Agostino Sarubbo2012-09-142-5/+8
* Stable for amd64, wrt bug #432366Agostino Sarubbo2012-09-144-32/+14
* sci-biology/seaview: Add missing deps, #432366Justin Lecher2012-09-145-11/+21
* sci-biology/allpaths: Respect CXXFLAGSJustin Lecher2012-08-303-7/+18
* sci-biology/allpaths: Fix for gcc-4.7Justin Lecher2012-08-304-26/+158
* sci-biology/meme: Version Bump; respect CFLAGS, #430774Justin Lecher2012-08-264-18/+241
* sci-biology/seaview: Version Bump; Drop overlinking, #431074Justin Lecher2012-08-265-43/+72
* sci-biology/recon: Respect CFLAGS and CC, #432660Justin Lecher2012-08-264-12/+84
* sci-biology/arb: Version BUmp; add fix for gcc-4.7, #431228Justin Lecher2012-08-145-22/+129
* sci-biology/mothur: Version BUmp; fix for buffer overflows, #431258Justin Lecher2012-08-148-13/+340
* sci-biology/uchime: New additionJustin Lecher2012-08-146-12/+95
* sci-biology/rnaview: Respect CFLAGS, #429536; Bump to EAPI=4Justin Lecher2012-08-034-43/+112
* sci-biology/tree-puzzle: Mask stupid test, which fails due to precision reach...Justin Lecher2012-08-014-11/+39
* sci-biology/finchtv: Use QA_PREBUILT for binary packagesJustin Lecher2012-07-244-20/+26
* Remove packagePacho Ramos2012-07-214-118/+0
* sci-biology/primer3: Version BUmpJustin Lecher2012-07-194-19/+84
* sci-biology/tophat: Version BUmp; do parallel builds; handle debug buildJustin Lecher2012-07-196-26/+190
* sci-biology/vcftools: Version BUmp, fix build systemJustin Lecher2012-07-194-10/+117
* sci-biology/goby-cpp: Version Bump, handle static-libsJustin Lecher2012-07-193-12/+52