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Diffstat (limited to 'sci-biology/infernal/infernal-1.0.2-r1.ebuild')
-rw-r--r--sci-biology/infernal/infernal-1.0.2-r1.ebuild38
1 files changed, 38 insertions, 0 deletions
diff --git a/sci-biology/infernal/infernal-1.0.2-r1.ebuild b/sci-biology/infernal/infernal-1.0.2-r1.ebuild
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index 000000000000..0930bfea766c
--- /dev/null
+++ b/sci-biology/infernal/infernal-1.0.2-r1.ebuild
@@ -0,0 +1,38 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/infernal/infernal-1.0.2-r1.ebuild,v 1.1 2010/11/04 10:06:22 xarthisius Exp $
+
+EAPI="2"
+
+inherit eutils
+
+DESCRIPTION="Inference of RNA alignments"
+HOMEPAGE="http://infernal.janelia.org/"
+SRC_URI="ftp://selab.janelia.org/pub/software/${PN}/${P}.tar.gz"
+
+LICENSE="GPL-3"
+SLOT="0"
+IUSE="mpi"
+KEYWORDS="~amd64 ~x86"
+
+DEPEND="mpi? ( virtual/mpi )"
+RDEPEND="${DEPEND}"
+
+src_prepare() {
+ epatch "${FILESDIR}"/${P}-parallel-build.patch \
+ "${FILESDIR}"/${P}-overflows.patch \
+ "${FILESDIR}"/${P}-ldflags.patch
+}
+
+src_configure() {
+ econf --prefix="${D}/usr" \
+ $(use_enable mpi)
+}
+
+src_install() {
+ emake install || die
+ (cd documentation/manpages; for i in *; do newman ${i} ${i/.man/.1}; done)
+ insinto /usr/share/${PN}
+ doins -r benchmarks tutorial intro matrices || die
+ dodoc 00README* Userguide.pdf documentation/release-notes/* || die
+}