Removed older versions, make tests not failures not die the src_test since almost all of the failures were only timings. This should be fixed next version bump, upstream contacted.

Package-Manager: portage-2.1.4.4

7 files changed, 24 insertions, 743 deletions

diff --git a/sci-libs/umfpack/ChangeLog b/sci-libs/umfpack/ChangeLog
index 92a09cc41747..96524f8375d5 100644
--- a/sci-libs/umfpack/ChangeLog
+++ b/sci-libs/umfpack/ChangeLog
@@ -1,6 +1,14 @@
 # ChangeLog for sci-libs/umfpack
 # Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/umfpack/ChangeLog,v 1.8 2008/04/15 15:49:50 jer Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/umfpack/ChangeLog,v 1.9 2008/07/08 10:04:00 bicatali Exp $
+
+  08 Jul 2008; Sébastien Fabbro <bicatali@gentoo.org>
+  -files/umfpack-5.0.3-autotools.patch,
+  -files/umfpack-5.1.0-autotools.patch, files/umfpack-5.2.0-autotools.patch,
+  -umfpack-5.0.3.ebuild, -umfpack-5.1.0.ebuild:
+  Removed older versions, make tests not failures not die the src_test since
+  almost all of the failures were only timings. This should be fixed next
+  version bump, upstream contacted.
 
   15 Apr 2008; Jeroen Roovers <jer@gentoo.org> umfpack-5.2.0.ebuild:
   Marked ~hppa (bug #215834).
diff --git a/sci-libs/umfpack/Manifest b/sci-libs/umfpack/Manifest
index 103bd7b9d1a5..5e3274392492 100644
--- a/sci-libs/umfpack/Manifest
+++ b/sci-libs/umfpack/Manifest
@@ -1,11 +1,15 @@
-AUX umfpack-5.0.3-autotools.patch 11710 RMD160 3db05b75198c5a772f7c973275128f13344f49d4 SHA1 0537ed02293952c8b352043ca226d28303f646e0 SHA256 c4a84022594837395432dffc414e477cde68f48679f72eaedf61e699461b0079
-AUX umfpack-5.1.0-autotools.patch 11439 RMD160 2b957f551146a6733f6c061abed65311c1cb44e9 SHA1 20335474d5e6e0b73e71b1da59817aed21aa907f SHA256 3b39cc0c3d64578c1c5d494e16092a827e5ae11076e87d53a688127f0d9a2f90
-AUX umfpack-5.2.0-autotools.patch 18287 RMD160 73b5f9df34dd938f60fd0035954347e369c2f54f SHA1 a3b961834dc1a9c3344f260124eb2626c929b87a SHA256 18c4c95c69918262dd7e42fab1f9207da8bdfd6a0557fe589a6fa0d671b8f4ba
-DIST UMFPACK-5.0.3.tar.gz 1266492 RMD160 c5b9915cf0d914c75ac5e6d91c588060d45a4d89 SHA1 a1fa0c60e68942adcdb3874cbd4d679e82a387d3 SHA256 ea9e49feeaab02c5980d7cf7751d5e3dd2ce397c29b281e6fa0aa7dc2db40a15
-DIST UMFPACK-5.1.0.tar.gz 1123142 RMD160 954a4c1eda292524de3d3cc8eff73c7840c7a03a SHA1 9d667cd73069002243549a62ae2e4409eaf50465 SHA256 872724b59fb00b9259b590850d11b9b5aaa20dba6a135271c2f61862ec0346fa
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
+AUX umfpack-5.2.0-autotools.patch 18317 RMD160 1a45245a299e831ea7d5bf5cd3c2fab166310bb6 SHA1 0656cc130ff6002520364edc88ca919a78277c63 SHA256 1fc1b6465d73582e61c0782b2d44f3b4e0f73ff22de9f65ffcdfc537c04d1452
 DIST UMFPACK-5.2.0.tar.gz 1122066 RMD160 98cb8c6f3d62d0f78018f82714b063e9a4aaa4c0 SHA1 056df2b498c97a5e4ed0b396f55e4e4faf4ca346 SHA256 cdf1061c551625f7d572f6f887bad978b4e0e90c6e448a08013ba72c95691c1c
-EBUILD umfpack-5.0.3.ebuild 1032 RMD160 b36d5ed9d9d5ad42c15674ce62deef883de5893b SHA1 c5875536be4bafafb7beb6928ee5728fc9898073 SHA256 f08820d630df9bc033c73652ccd43d186143872eeeb25af941d8df11cd0524f2
-EBUILD umfpack-5.1.0.ebuild 1014 RMD160 e67ab5244e6ddb056e2cde2f68b72079a346fede SHA1 3ef48430b3727e59f0c551ef211457ebfaa19709 SHA256 f1bdef1782706f789e5fa05afbe72c686b9ffef8f4cf34a77dcd6323db13ba58
 EBUILD umfpack-5.2.0.ebuild 1109 RMD160 8eedd7c5002894ee39e025c45ee7a351e6e278fb SHA1 36fae2a2c53d28a6b31f882566e0a12c53f2cae4 SHA256 42041a86853cfb41bd4a177a9c9aa3abe6bd14befe798bbf1b084b9f75e976c7
-MISC ChangeLog 1452 RMD160 7698f5c57ddc8c82cbe73a8f23ccd29cc2975543 SHA1 957af57934f92a5e18a7b4cbd54888aa8293e86f SHA256 73f2797782d8c83b2d203aead6f1d78a40e93f39545958873d10553fbd77971f
+MISC ChangeLog 1865 RMD160 bb8ab7d3e49bf38451ff5e394731ebccb447ac77 SHA1 572cc5a1c19226fea10282821d91b41a0466b37f SHA256 d82f154771fa7acb13aa62e754554689b70224a476af7e311914d441080bee66
 MISC metadata.xml 459 RMD160 68be0781281582f5e418dd632e549f61c8302ef3 SHA1 be53152268274dd71ef87b819014761f95785d1c SHA256 21d8e999c800cfa92da3b00eb81697bb810b02ed2b693babf862877ea3cbc377
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.9 (GNU/Linux)
+
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++PoAn0PmnP9Wo2AREg/2mNv0tECbxNHV
+=ql2+
+-----END PGP SIGNATURE-----
diff --git a/sci-libs/umfpack/files/umfpack-5.0.3-autotools.patch b/sci-libs/umfpack/files/umfpack-5.0.3-autotools.patch
deleted file mode 100644
index 0acefbac9f84..000000000000
--- a/sci-libs/umfpack/files/umfpack-5.0.3-autotools.patch
+++ /dev/null
@@ -1,324 +0,0 @@
-diff -Nur UMFPACK.orig/Demo/Makefile UMFPACK/Demo/Makefile
---- UMFPACK.orig/Demo/Makefile	2006-05-02 13:46:21.000000000 +0100
-+++ UMFPACK/Demo/Makefile	2007-02-18 20:03:33.000000000 +0000
-@@ -5,29 +5,14 @@
- # UMFPACK Version 4.4, Copyright (c) 2005 by Timothy A. Davis.
- # All Rights Reserved.  See ../Doc/License for License.
- 
--default: libs umfpack_di_demo umfpack_zi_demo umfpack_dl_demo umfpack_zl_demo \
-+default: umfpack_di_demo umfpack_zi_demo umfpack_dl_demo umfpack_zl_demo \
- 	umfpack_simple
- 
--include ../../UFconfig/UFconfig.mk
-+C = $(CC) $(CFLAGS) -I../Include
-+INC = ../Include/umfpack.h
-+UMFPACK= ../Source/.libs/libumfpack.a
-+LIBS = -lblas -lamd -lm
- 
--C = $(CC) $(CFLAGS) $(UMFPACK_CONFIG) -I../Include -I../../AMD/Include \
--    -I../../UFconfig
--
--INC = ../Include/umfpack.h ../../AMD/Include/amd.h ../../UFconfig/UFconfig.h
--
--LIBS = $(BLAS) $(XERBLA) $(LIB)
--
--../Lib/libumfpack.a:
--	( cd ../Source ; $(MAKE) )
--
--../../AMD/Lib/libamd.a:
--	( cd ../../AMD/Source ; $(MAKE) )
--
--UMFPACK = ../Lib/libumfpack.a ../../AMD/Lib/libamd.a
--
--libs:
--	( cd ../Source ; $(MAKE) )
--	( cd ../../AMD/Source ; $(MAKE) )
- 
- #-------------------------------------------------------------------------------
- # Create the demo programs, run them, and compare the output
-diff -Nur UMFPACK.orig/Include/Makefile.am UMFPACK/Include/Makefile.am
---- UMFPACK.orig/Include/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ UMFPACK/Include/Makefile.am	2007-02-18 23:30:33.000000000 +0000
-@@ -0,0 +1,34 @@
-+include_HEADERS = \
-+	umfpack.h \
-+	umfpack_col_to_triplet.h \
-+	umfpack_defaults.h \
-+	umfpack_free_numeric.h \
-+	umfpack_free_symbolic.h \
-+	umfpack_get_determinant.h \
-+	umfpack_get_lunz.h \
-+	umfpack_get_numeric.h \
-+	umfpack_get_symbolic.h \
-+	umfpack_global.h \
-+	umfpack_load_numeric.h \
-+	umfpack_load_symbolic.h \
-+	umfpack_numeric.h \
-+	umfpack_qsymbolic.h \
-+	umfpack_report_control.h \
-+	umfpack_report_info.h \
-+	umfpack_report_matrix.h \
-+	umfpack_report_numeric.h \
-+	umfpack_report_perm.h \
-+	umfpack_report_status.h \
-+	umfpack_report_symbolic.h \
-+	umfpack_report_triplet.h \
-+	umfpack_report_vector.h \
-+	umfpack_save_numeric.h \
-+	umfpack_save_symbolic.h \
-+	umfpack_scale.h \
-+	umfpack_solve.h \
-+	umfpack_symbolic.h \
-+	umfpack_tictoc.h \
-+	umfpack_timer.h \
-+	umfpack_transpose.h \
-+	umfpack_triplet_to_col.h \
-+	umfpack_wsolve.h
-diff -Nur UMFPACK.orig/Makefile.am UMFPACK/Makefile.am
---- UMFPACK.orig/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ UMFPACK/Makefile.am	2007-02-17 18:55:57.000000000 +0000
-@@ -0,0 +1,2 @@
-+SUBDIRS = Source Include
-+EXTRA_DIST = README.txt
-diff -Nur UMFPACK.orig/Source/Makefile.am UMFPACK/Source/Makefile.am
---- UMFPACK.orig/Source/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ UMFPACK/Source/Makefile.am	2007-02-18 19:56:22.000000000 +0000
-@@ -0,0 +1,220 @@
-+AM_CPPFLAGS = -I$(top_srcdir)/Include
-+lib_LTLIBRARIES = libumfpack.la
-+
-+# non-user-callable umf_*.[ch] files:
-+UMFCH = umf_assemble umf_blas3_update umf_build_tuples umf_create_element \
-+	umf_dump umf_extend_front umf_garbage_collection umf_get_memory \
-+	umf_init_front umf_kernel umf_kernel_init umf_kernel_wrapup \
-+	umf_local_search umf_lsolve umf_ltsolve umf_mem_alloc_element \
-+	umf_mem_alloc_head_block umf_mem_alloc_tail_block \
-+	umf_mem_free_tail_block umf_mem_init_memoryspace \
-+	umf_report_vector umf_row_search umf_scale_column \
-+	umf_set_stats umf_solve umf_symbolic_usage umf_transpose \
-+	umf_tuple_lengths umf_usolve umf_utsolve umf_valid_numeric \
-+	umf_valid_symbolic umf_grow_front umf_start_front umf_2by2 \
-+	umf_store_lu umf_scale
-+
-+# non-user-callable umf_*.[ch] files, int/UF_long versions only (no real/complex):
-+UMFINT = umf_analyze umf_apply_order umf_colamd umf_free umf_fsize \
-+	umf_is_permutation umf_malloc umf_realloc umf_report_perm \
-+	umf_singletons
-+
-+# non-user-callable, created from umf_ltsolve.c, umf_utsolve.c,
-+# umf_triplet.c, and umf_assemble.c , with int/UF_long and real/complex versions:
-+UMF_CREATED = umf_lhsolve umf_uhsolve umf_triplet_map_nox \
-+	umf_triplet_nomap_x umf_triplet_nomap_nox umf_triplet_map_x \
-+	umf_assemble_fixq umf_store_lu_drop
-+
-+# non-user-callable, int/UF_long and real/complex versions:
-+UMF = $(UMF_CREATED) $(UMFCH)
-+
-+# user-callable umfpack_*.[ch] files (int/UF_long and real/complex):
-+UMFPACK = umfpack_col_to_triplet umfpack_defaults umfpack_free_numeric \
-+	umfpack_free_symbolic umfpack_get_numeric umfpack_get_lunz \
-+	umfpack_get_symbolic umfpack_get_determinant umfpack_numeric \
-+	umfpack_qsymbolic umfpack_report_control umfpack_report_info \
-+	umfpack_report_matrix umfpack_report_numeric umfpack_report_perm \
-+	umfpack_report_status umfpack_report_symbolic umfpack_report_triplet \
-+	umfpack_report_vector umfpack_solve umfpack_symbolic \
-+	umfpack_transpose umfpack_triplet_to_col umfpack_scale \
-+	umfpack_load_numeric umfpack_save_numeric \
-+	umfpack_load_symbolic umfpack_save_symbolic
-+
-+# user-callable, created from umfpack_solve.c (umfpack_wsolve.h exists, though):
-+# with int/UF_long and real/complex versions:
-+UMFPACKW = umfpack_wsolve
-+
-+USER = $(UMFPACKW) $(UMFPACK)
-+
-+# user-callable, only one version for int/UF_long, real/complex, *.[ch] files:
-+GENERIC = umfpack_timer umfpack_tictoc umfpack_global
-+
-+
-+#-------------------------------------------------------------------------------
-+# object files for each version
-+#-------------------------------------------------------------------------------
-+
-+DI = $(addsuffix .lo, $(subst umf_,umf_di_,$(UMF)) $(subst umfpack_,umfpack_di_,$(USER)))
-+DL = $(addsuffix .lo, $(subst umf_,umf_dl_,$(UMF)) $(subst umfpack_,umfpack_dl_,$(USER)))
-+ZI = $(addsuffix .lo, $(subst umf_,umf_zi_,$(UMF)) $(subst umfpack_,umfpack_zi_,$(USER)))
-+ZL = $(addsuffix .lo, $(subst umf_,umf_zl_,$(UMF)) $(subst umfpack_,umfpack_zl_,$(USER)))
-+II = $(addsuffix .lo, $(subst umf_,umf_i_,$(UMFINT)))
-+LL = $(addsuffix .lo, $(subst umf_,umf_l_,$(UMFINT)))
-+GN = $(addsuffix .lo, $(subst umfpack_,umfpack_gn_,$(GENERIC)))
-+
-+#-------------------------------------------------------------------------------
-+# compile each int and UF_long routine (with no real/complex version)
-+#-------------------------------------------------------------------------------
-+
-+umf_i_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+umf_l_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the DI version
-+#-------------------------------------------------------------------------------
-+
-+umf_di_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+umf_di_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DDINT -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_di_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_di_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDO_MAP -c $< -o $@
-+
-+umf_di_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDO_VALUES -c $< -o $@
-+
-+umf_di_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+umf_di_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DDINT -DFIXQ -c $< -o $@
-+
-+umf_di_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDROP -c $< -o $@
-+
-+umfpack_di_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DDINT -DWSOLVE -c $< -o $@
-+
-+umfpack_di_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the DL version
-+#-------------------------------------------------------------------------------
-+
-+umf_dl_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+umf_dl_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_dl_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_dl_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDO_MAP -c $< -o $@
-+
-+umf_dl_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDO_VALUES -c $< -o $@
-+
-+umf_dl_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+umf_dl_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DFIXQ -c $< -o $@
-+
-+umf_dl_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDROP -c $< -o $@
-+
-+umfpack_dl_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DWSOLVE -c $< -o $@
-+
-+umfpack_dl_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the ZI version
-+#-------------------------------------------------------------------------------
-+
-+umf_zi_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DZINT -c $< -o $@
-+
-+umf_zi_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DZINT -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_zi_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_zi_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDO_MAP -c $< -o $@
-+
-+umf_zi_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDO_VALUES -c $< -o $@
-+
-+umf_zi_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -c $< -o $@
-+
-+umf_zi_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DZINT -DFIXQ -c $< -o $@
-+
-+umf_zi_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDROP -c $< -o $@
-+
-+umfpack_zi_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DZINT -DWSOLVE -c $< -o $@
-+
-+umfpack_zi_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DZINT -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the ZL version
-+#-------------------------------------------------------------------------------
-+
-+umf_zl_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DZLONG -c $< -o $@
-+
-+umf_zl_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_zl_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_zl_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDO_MAP -c $< -o $@
-+
-+umf_zl_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDO_VALUES -c $< -o $@
-+
-+umf_zl_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -c $< -o $@
-+
-+umf_zl_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DFIXQ -c $< -o $@
-+
-+umf_zl_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDROP -c $< -o $@
-+
-+umfpack_zl_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DWSOLVE -c $< -o $@
-+
-+umfpack_zl_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DZLONG -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# Create the generic routines (GN) using a generic rule
-+#-------------------------------------------------------------------------------
-+
-+umfpack_gn_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -c $< -o $@
-+
-+
-+libumfpack_la_SOURCES =
-+libumfpack_la_LIBADD = $(II) $(LL) $(GN) $(DI) $(DL) $(ZI) $(ZL)
-diff -Nur UMFPACK.orig/configure.ac UMFPACK/configure.ac
---- UMFPACK.orig/configure.ac	1970-01-01 01:00:00.000000000 +0100
-+++ UMFPACK/configure.ac	2007-02-18 23:30:46.000000000 +0000
-@@ -0,0 +1,14 @@
-+#                                               -*- Autoconf -*-
-+AC_PREREQ(2.59)
-+AC_INIT(umfpack, 5.0.3, davis@cise.ufl.edu)
-+AM_INIT_AUTOMAKE([foreign])
-+AC_PROG_INSTALL
-+AC_PROG_F77
-+AC_PROG_LIBTOOL
-+AC_CHECK_LIB(m, sqrt)
-+AC_CHECK_LIB(blas, dgemv_)
-+AC_CHECK_LIB(amd, amd_aat)
-+AC_CONFIG_FILES([Source/Makefile
-+		 Include/Makefile	
-+		 Makefile])
-+AC_OUTPUT
diff --git a/sci-libs/umfpack/files/umfpack-5.1.0-autotools.patch b/sci-libs/umfpack/files/umfpack-5.1.0-autotools.patch
deleted file mode 100644
index 7f49f4e586e4..000000000000
--- a/sci-libs/umfpack/files/umfpack-5.1.0-autotools.patch
+++ /dev/null
@@ -1,321 +0,0 @@
-diff -Nur ../UMFPACK.orig/configure.ac ./configure.ac
---- ../UMFPACK.orig/configure.ac	1970-01-01 01:00:00.000000000 +0100
-+++ ./configure.ac	2007-08-18 18:18:41.664550371 +0100
-@@ -0,0 +1,16 @@
-+#                                               -*- Autoconf -*-
-+AC_PREREQ(2.59)
-+AC_INIT(umfpack, 5.1.0, davis@cise.ufl.edu)
-+AC_CONFIG_SRCDIR([Source/umf_solve.c])
-+AC_CONFIG_HEADER([config.h])
-+AM_INIT_AUTOMAKE([foreign])
-+AC_PROG_INSTALL
-+AC_PROG_F77
-+AC_PROG_LIBTOOL
-+AC_CHECK_LIB(m, sqrt)
-+AC_CHECK_LIB(blas, dgemv_)
-+AC_CHECK_LIB(amd, amd_aat)
-+AC_CONFIG_FILES([Source/Makefile
-+		 Include/Makefile	
-+		 Makefile])
-+AC_OUTPUT
-diff -Nur ../UMFPACK.orig/Demo/Makefile ./Demo/Makefile
---- ../UMFPACK.orig/Demo/Makefile	2007-05-05 20:56:55.000000000 +0100
-+++ ./Demo/Makefile	2007-08-18 19:05:37.999937028 +0100
-@@ -5,16 +5,13 @@
- # UMFPACK Version 4.4, Copyright (c) 2005 by Timothy A. Davis.
- # All Rights Reserved.  See ../Doc/License for License.
- 
--default: libs run
-+default: run
- 
--include ../../UFconfig/UFconfig.mk
-+C = $(CC) $(CFLAGS) -I../Include
- 
--C = $(CC) $(CFLAGS) $(UMFPACK_CONFIG) -I../Include -I../../AMD/Include \
--    -I../../UFconfig
-+INC = ../Include/umfpack.h
- 
--INC = ../Include/umfpack.h ../../AMD/Include/amd.h ../../UFconfig/UFconfig.h
--
--LIBS = $(BLAS) $(XERBLA) $(LIB)
-+LIBS = -lblas -lm -lamd
- 
- ../Lib/libumfpack.a:
- 	( cd ../Lib ; $(MAKE) )
-@@ -22,7 +19,7 @@
- ../../AMD/Lib/libamd.a:
- 	( cd ../../AMD ; $(MAKE) library )
- 
--UMFPACK = ../Lib/libumfpack.a ../../AMD/Lib/libamd.a
-+UMFPACK = ../Source/.libs/libumfpack.a
- 
- libs:
- 	( cd ../Lib ; $(MAKE) )
-diff -Nur ../UMFPACK.orig/Include/Makefile.am ./Include/Makefile.am
---- ../UMFPACK.orig/Include/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ ./Include/Makefile.am	2007-08-18 18:17:17.031524193 +0100
-@@ -0,0 +1,34 @@
-+include_HEADERS = \
-+	umfpack.h \
-+	umfpack_col_to_triplet.h \
-+	umfpack_defaults.h \
-+	umfpack_free_numeric.h \
-+	umfpack_free_symbolic.h \
-+	umfpack_get_determinant.h \
-+	umfpack_get_lunz.h \
-+	umfpack_get_numeric.h \
-+	umfpack_get_symbolic.h \
-+	umfpack_global.h \
-+	umfpack_load_numeric.h \
-+	umfpack_load_symbolic.h \
-+	umfpack_numeric.h \
-+	umfpack_qsymbolic.h \
-+	umfpack_report_control.h \
-+	umfpack_report_info.h \
-+	umfpack_report_matrix.h \
-+	umfpack_report_numeric.h \
-+	umfpack_report_perm.h \
-+	umfpack_report_status.h \
-+	umfpack_report_symbolic.h \
-+	umfpack_report_triplet.h \
-+	umfpack_report_vector.h \
-+	umfpack_save_numeric.h \
-+	umfpack_save_symbolic.h \
-+	umfpack_scale.h \
-+	umfpack_solve.h \
-+	umfpack_symbolic.h \
-+	umfpack_tictoc.h \
-+	umfpack_timer.h \
-+	umfpack_transpose.h \
-+	umfpack_triplet_to_col.h \
-+	umfpack_wsolve.h
-diff -Nur ../UMFPACK.orig/Makefile.am ./Makefile.am
---- ../UMFPACK.orig/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ ./Makefile.am	2007-08-18 18:17:17.031524193 +0100
-@@ -0,0 +1,2 @@
-+SUBDIRS = Source Include
-+EXTRA_DIST = README.txt
-diff -Nur ../UMFPACK.orig/Source/Makefile.am ./Source/Makefile.am
---- ../UMFPACK.orig/Source/Makefile.am	1970-01-01 01:00:00.000000000 +0100
-+++ ./Source/Makefile.am	2007-08-18 18:17:17.031524193 +0100
-@@ -0,0 +1,220 @@
-+AM_CPPFLAGS = -I$(top_srcdir)/Include
-+lib_LTLIBRARIES = libumfpack.la
-+
-+# non-user-callable umf_*.[ch] files:
-+UMFCH = umf_assemble umf_blas3_update umf_build_tuples umf_create_element \
-+	umf_dump umf_extend_front umf_garbage_collection umf_get_memory \
-+	umf_init_front umf_kernel umf_kernel_init umf_kernel_wrapup \
-+	umf_local_search umf_lsolve umf_ltsolve umf_mem_alloc_element \
-+	umf_mem_alloc_head_block umf_mem_alloc_tail_block \
-+	umf_mem_free_tail_block umf_mem_init_memoryspace \
-+	umf_report_vector umf_row_search umf_scale_column \
-+	umf_set_stats umf_solve umf_symbolic_usage umf_transpose \
-+	umf_tuple_lengths umf_usolve umf_utsolve umf_valid_numeric \
-+	umf_valid_symbolic umf_grow_front umf_start_front umf_2by2 \
-+	umf_store_lu umf_scale
-+
-+# non-user-callable umf_*.[ch] files, int/UF_long versions only (no real/complex):
-+UMFINT = umf_analyze umf_apply_order umf_colamd umf_free umf_fsize \
-+	umf_is_permutation umf_malloc umf_realloc umf_report_perm \
-+	umf_singletons
-+
-+# non-user-callable, created from umf_ltsolve.c, umf_utsolve.c,
-+# umf_triplet.c, and umf_assemble.c , with int/UF_long and real/complex versions:
-+UMF_CREATED = umf_lhsolve umf_uhsolve umf_triplet_map_nox \
-+	umf_triplet_nomap_x umf_triplet_nomap_nox umf_triplet_map_x \
-+	umf_assemble_fixq umf_store_lu_drop
-+
-+# non-user-callable, int/UF_long and real/complex versions:
-+UMF = $(UMF_CREATED) $(UMFCH)
-+
-+# user-callable umfpack_*.[ch] files (int/UF_long and real/complex):
-+UMFPACK = umfpack_col_to_triplet umfpack_defaults umfpack_free_numeric \
-+	umfpack_free_symbolic umfpack_get_numeric umfpack_get_lunz \
-+	umfpack_get_symbolic umfpack_get_determinant umfpack_numeric \
-+	umfpack_qsymbolic umfpack_report_control umfpack_report_info \
-+	umfpack_report_matrix umfpack_report_numeric umfpack_report_perm \
-+	umfpack_report_status umfpack_report_symbolic umfpack_report_triplet \
-+	umfpack_report_vector umfpack_solve umfpack_symbolic \
-+	umfpack_transpose umfpack_triplet_to_col umfpack_scale \
-+	umfpack_load_numeric umfpack_save_numeric \
-+	umfpack_load_symbolic umfpack_save_symbolic
-+
-+# user-callable, created from umfpack_solve.c (umfpack_wsolve.h exists, though):
-+# with int/UF_long and real/complex versions:
-+UMFPACKW = umfpack_wsolve
-+
-+USER = $(UMFPACKW) $(UMFPACK)
-+
-+# user-callable, only one version for int/UF_long, real/complex, *.[ch] files:
-+GENERIC = umfpack_timer umfpack_tictoc umfpack_global
-+
-+
-+#-------------------------------------------------------------------------------
-+# object files for each version
-+#-------------------------------------------------------------------------------
-+
-+DI = $(addsuffix .lo, $(subst umf_,umf_di_,$(UMF)) $(subst umfpack_,umfpack_di_,$(USER)))
-+DL = $(addsuffix .lo, $(subst umf_,umf_dl_,$(UMF)) $(subst umfpack_,umfpack_dl_,$(USER)))
-+ZI = $(addsuffix .lo, $(subst umf_,umf_zi_,$(UMF)) $(subst umfpack_,umfpack_zi_,$(USER)))
-+ZL = $(addsuffix .lo, $(subst umf_,umf_zl_,$(UMF)) $(subst umfpack_,umfpack_zl_,$(USER)))
-+II = $(addsuffix .lo, $(subst umf_,umf_i_,$(UMFINT)))
-+LL = $(addsuffix .lo, $(subst umf_,umf_l_,$(UMFINT)))
-+GN = $(addsuffix .lo, $(subst umfpack_,umfpack_gn_,$(GENERIC)))
-+
-+#-------------------------------------------------------------------------------
-+# compile each int and UF_long routine (with no real/complex version)
-+#-------------------------------------------------------------------------------
-+
-+umf_i_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+umf_l_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the DI version
-+#-------------------------------------------------------------------------------
-+
-+umf_di_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+umf_di_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DDINT -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_di_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_di_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDO_MAP -c $< -o $@
-+
-+umf_di_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDO_VALUES -c $< -o $@
-+
-+umf_di_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+umf_di_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DDINT -DFIXQ -c $< -o $@
-+
-+umf_di_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DDINT -DDROP -c $< -o $@
-+
-+umfpack_di_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DDINT -DWSOLVE -c $< -o $@
-+
-+umfpack_di_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DDINT -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the DL version
-+#-------------------------------------------------------------------------------
-+
-+umf_dl_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+umf_dl_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_dl_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_dl_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDO_MAP -c $< -o $@
-+
-+umf_dl_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDO_VALUES -c $< -o $@
-+
-+umf_dl_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+umf_dl_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DFIXQ -c $< -o $@
-+
-+umf_dl_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DDROP -c $< -o $@
-+
-+umfpack_dl_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DDLONG -DWSOLVE -c $< -o $@
-+
-+umfpack_dl_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DDLONG -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the ZI version
-+#-------------------------------------------------------------------------------
-+
-+umf_zi_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DZINT -c $< -o $@
-+
-+umf_zi_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DZINT -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_zi_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_zi_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDO_MAP -c $< -o $@
-+
-+umf_zi_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDO_VALUES -c $< -o $@
-+
-+umf_zi_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZINT -c $< -o $@
-+
-+umf_zi_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DZINT -DFIXQ -c $< -o $@
-+
-+umf_zi_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DZINT -DDROP -c $< -o $@
-+
-+umfpack_zi_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DZINT -DWSOLVE -c $< -o $@
-+
-+umfpack_zi_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DZINT -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# compile each routine in the ZL version
-+#-------------------------------------------------------------------------------
-+
-+umf_zl_%.lo: umf_%.c $(INC)
-+	$(LTCOMPILE) -DZLONG -c $< -o $@
-+
-+umf_zl_%hsolve.lo: umf_%tsolve.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DCONJUGATE_SOLVE -c $< -o $@
-+
-+umf_zl_triplet_map_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDO_MAP -DDO_VALUES -c $< -o $@
-+
-+umf_zl_triplet_map_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDO_MAP -c $< -o $@
-+
-+umf_zl_triplet_nomap_x.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDO_VALUES -c $< -o $@
-+
-+umf_zl_triplet_nomap_nox.lo: umf_triplet.c $(INC)
-+	$(LTCOMPILE) -DZLONG -c $< -o $@
-+
-+umf_zl_assemble_fixq.lo: umf_assemble.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DFIXQ -c $< -o $@
-+
-+umf_zl_store_lu_drop.lo: umf_store_lu.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DDROP -c $< -o $@
-+
-+umfpack_zl_wsolve.lo: umfpack_solve.c $(INC)
-+	$(LTCOMPILE) -DZLONG -DWSOLVE -c $< -o $@
-+
-+umfpack_zl_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -DZLONG -c $< -o $@
-+
-+#-------------------------------------------------------------------------------
-+# Create the generic routines (GN) using a generic rule
-+#-------------------------------------------------------------------------------
-+
-+umfpack_gn_%.lo: umfpack_%.c $(INC)
-+	$(LTCOMPILE) -c $< -o $@
-+
-+
-+libumfpack_la_SOURCES =
-+libumfpack_la_LIBADD = $(II) $(LL) $(GN) $(DI) $(DL) $(ZI) $(ZL)
diff --git a/sci-libs/umfpack/files/umfpack-5.2.0-autotools.patch b/sci-libs/umfpack/files/umfpack-5.2.0-autotools.patch
index 1056a89b5604..ae8734311c20 100644
--- a/sci-libs/umfpack/files/umfpack-5.2.0-autotools.patch
+++ b/sci-libs/umfpack/files/umfpack-5.2.0-autotools.patch
@@ -484,7 +484,7 @@
 +	$(II) $(LL) $(GN) $(DI) $(DL) $(ZI) $(ZL)
 --- Demo/Makefile.am 	1970-01-01 01:00:00.000000000 +0100
 +++ Demo/Makefile.am	2008-01-29 18:38:19.000000000 +0000
-@@ -0,0 +1,45 @@
+@@ -0,0 +1,44 @@
 +AM_CPPFLAGS = -I$(top_srcdir)/Include
 +LDADD = $(top_builddir)/Source/libumfpack.la
 +
@@ -514,7 +514,7 @@
 +	fi; \
 +	total=$$(($$total + 1)); \
 +	for i in *demo; do \
-+		echo "--- Testing $i ---"; \
++		echo "--- Testing $$i ---"; \
 +		./$$i$(EXEEXT) > my_$$i.out; \
 +		diff $$i.out my_$$i.out; \
 +		if [ "x$$?" = "x0" ]; then \
@@ -527,6 +527,5 @@
 +	done; \
 +	if [ $$failed -gt 0 ]; then \
 +		echo "*** ERROR: $$failed/$$total tests failed!!!"; \
-+		echo ""; \
-+		exit 1; \
++		echo "Please check the failures before reporting"; \
 +	fi
diff --git a/sci-libs/umfpack/umfpack-5.0.3.ebuild b/sci-libs/umfpack/umfpack-5.0.3.ebuild
deleted file mode 100644
index b3fe7e2df2e1..000000000000
--- a/sci-libs/umfpack/umfpack-5.0.3.ebuild
+++ /dev/null
@@ -1,43 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/umfpack/umfpack-5.0.3.ebuild,v 1.2 2007/08/18 18:17:09 bicatali Exp $
-
-inherit autotools eutils
-
-MY_PN=UMFPACK
-
-DESCRIPTION="Unsymmetric multifrontal sparse LU factorization library"
-HOMEPAGE="http://www.cise.ufl.edu/research/sparse/umfpack"
-SRC_URI="http://www.cise.ufl.edu/research/sparse/${PN}/${MY_PN}-${PV}.tar.gz"
-
-LICENSE="LGPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc"
-DEPEND="virtual/blas
-	>=sci-libs/amd-2.0"
-RESTRICT="test"
-S="${WORKDIR}/${MY_PN}"
-
-src_unpack() {
-	unpack ${A}
-	epatch "${FILESDIR}"/${P}-autotools.patch
-	cd "${S}"
-	rm -f Makefile */*akefile
-	eautoreconf
-}
-
-src_test() {
-	cd "${S}"/Demo
-	# test is still buggy but worth testing
-	make > test.log || die "test failed"
-}
-
-src_install() {
-	emake DESTDIR="${D}" install || die "emake install failed"
-	dodoc README.txt Doc/ChangeLog
-	if use doc; then
-		insinto /usr/share/doc/${PF}
-		doins Doc/*.pdf
-	fi
-}
diff --git a/sci-libs/umfpack/umfpack-5.1.0.ebuild b/sci-libs/umfpack/umfpack-5.1.0.ebuild
deleted file mode 100644
index dc1d756a3dd0..000000000000
--- a/sci-libs/umfpack/umfpack-5.1.0.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/umfpack/umfpack-5.1.0.ebuild,v 1.2 2007/09/09 14:25:47 josejx Exp $
-
-inherit autotools eutils
-
-MY_PN=UMFPACK
-
-DESCRIPTION="Unsymmetric multifrontal sparse LU factorization library"
-HOMEPAGE="http://www.cise.ufl.edu/research/sparse/umfpack"
-SRC_URI="http://www.cise.ufl.edu/research/sparse/${PN}/${MY_PN}-${PV}.tar.gz"
-
-LICENSE="LGPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~ppc ~x86"
-IUSE="doc"
-DEPEND="virtual/blas
-	>=sci-libs/amd-2.0"
-
-S="${WORKDIR}/${MY_PN}"
-
-src_unpack() {
-	unpack ${A}
-	cd "${S}"
-	epatch "${FILESDIR}"/${P}-autotools.patch
-	eautoreconf
-}
-
-src_test() {
-	cd "${S}"/Demo
-	# test is still a bit buggy
-	make || die "test failed"
-}
-
-src_install() {
-	emake DESTDIR="${D}" install || die "emake install failed"
-	dodoc README.txt Doc/ChangeLog || die "dodoc failed"
-	if use doc; then
-		insinto /usr/share/doc/${PF}
-		doins Doc/*.pdf || die "doins failed"
-	fi
-}