Bump. This version does a much better job of finding stuff, and the pymol plugin's a lot more capable.

Package-Manager: portage-2.1_pre10-r5

4 files changed, 88 insertions, 4 deletions

diff --git a/sci-chemistry/caver/ChangeLog b/sci-chemistry/caver/ChangeLog
index 1cd00b2ff2dd..ac3376e5cbd3 100644
--- a/sci-chemistry/caver/ChangeLog
+++ b/sci-chemistry/caver/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-chemistry/caver
-# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/caver/ChangeLog,v 1.1 2005/12/20 03:56:38 spyderous Exp $
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/caver/ChangeLog,v 1.2 2006/05/14 06:12:45 spyderous Exp $
+
+*caver-0.99.2 (14 May 2006)
+
+  14 May 2006; Donnie Berkholz <spyderous@gentoo.org>; +caver-0.99.2.ebuild:
+  Bump. This version does a much better job of finding stuff, and the pymol
+  plugin's a lot more capable.
 
 *caver-0.99.1 (20 Dec 2005)
 
diff --git a/sci-chemistry/caver/Manifest b/sci-chemistry/caver/Manifest
index c9d229267e6f..43ac1e9ca021 100644
--- a/sci-chemistry/caver/Manifest
+++ b/sci-chemistry/caver/Manifest
@@ -1,4 +1,26 @@
-MD5 8ce02fd5913949883e8686e441725d75 ChangeLog 546
+DIST caverPLUG_unix_v0.99.2.tar.gz 81270 RMD160 58a5b2b7a1efe41a86d507831f754419ae912b12 SHA256 5b7ca30f26023e2ed9eda6a5430ca5db0ebef7b34f7f8d2391a49182ec0663b1 size 81270
+DIST caver_unix_v0.99.1.tar.gz 898765 size 898765
+DIST caver_unix_v0.99.2.tar.gz 1152263 RMD160 01b877bef15d0f0e1ccce8a3dbcda83826ba76c5 SHA256 9934b5e80f375159132c5327df1fa8bd19ce90682c04c4cd9b91e62476e0f98b size 1152263
+DIST pymolplug.tar.gz 81137 size 81137
+EBUILD caver-0.99.1.ebuild 1382 RMD160 93c178976bb98acebfaa94180d49e2b3e0d186c3 SHA1 2d7e2964f8952383a1f588c548521a1435b6f97b SHA256 eb2f5b4ee5f23c4a35ff3fceb4dd0cf75e134b06c1fa180121f14462391e2517 size 1382
 MD5 bb4a1218e09746c04c1f3da50f76eb66 caver-0.99.1.ebuild 1382
-MD5 946c4f9350e2386e497befe7afbe9cc2 files/digest-caver-0.99.1 130
+RMD160 93c178976bb98acebfaa94180d49e2b3e0d186c3 caver-0.99.1.ebuild 1382
+SHA256 eb2f5b4ee5f23c4a35ff3fceb4dd0cf75e134b06c1fa180121f14462391e2517 caver-0.99.1.ebuild 1382
+EBUILD caver-0.99.2.ebuild 1424 RMD160 dcbc74f15ede15298efaf8ce24e6dafeca4b9e04 SHA1 8910b41275417e748cfd79642c7f5c3fe098b2b2 SHA256 8a82be54de34e816d03d241b0ed10ccbe28a00052ecc11357b9b753cf65364b5 size 1424
+MD5 52ba09a3550f24265d76eef093599850 caver-0.99.2.ebuild 1424
+RMD160 dcbc74f15ede15298efaf8ce24e6dafeca4b9e04 caver-0.99.2.ebuild 1424
+SHA256 8a82be54de34e816d03d241b0ed10ccbe28a00052ecc11357b9b753cf65364b5 caver-0.99.2.ebuild 1424
+MISC ChangeLog 760 RMD160 988e696bbef543a6adfaf08061c0be145bd47bef SHA1 cf396ee183c874f027fa4d595768329b25a259af SHA256 68d4845e4a61c65c9dd6b87b117d506706c86efe170a974d55b869724f338b7e size 760
+MD5 ac67b7f8e26d3c7b236f53fe0f93bfd6 ChangeLog 760
+RMD160 988e696bbef543a6adfaf08061c0be145bd47bef ChangeLog 760
+SHA256 68d4845e4a61c65c9dd6b87b117d506706c86efe170a974d55b869724f338b7e ChangeLog 760
+MISC metadata.xml 248 RMD160 6488d9f1ef3e05e6ac5a29ddcc818e5ead0a5230 SHA1 75a648fddef9922cdfe21fb0298a1c746190fd82 SHA256 de0ad7dc383b462c407cae015684d27c090455eac87c6f0f9ff581ef6e0b5b27 size 248
 MD5 af1bfbb0777267a03e889b08173f2757 metadata.xml 248
+RMD160 6488d9f1ef3e05e6ac5a29ddcc818e5ead0a5230 metadata.xml 248
+SHA256 de0ad7dc383b462c407cae015684d27c090455eac87c6f0f9ff581ef6e0b5b27 metadata.xml 248
+MD5 946c4f9350e2386e497befe7afbe9cc2 files/digest-caver-0.99.1 130
+RMD160 9ca2102fa7a9b2c5257ff4044202c040d82ce628 files/digest-caver-0.99.1 130
+SHA256 fb5d883d649a3227ef05372d785aa49851202133670d2199ac6aecdf11ecae08 files/digest-caver-0.99.1 130
+MD5 8524c8b5718aaac466fa34658468955a files/digest-caver-0.99.2 524
+RMD160 1e54afa8530246f319c0b0a235d9cce35dc050c4 files/digest-caver-0.99.2 524
+SHA256 e7815fe179e318f1f736e8f6cf473f92fb8df0aae52222de71f0ce2fc82c88cf files/digest-caver-0.99.2 524
diff --git a/sci-chemistry/caver/caver-0.99.2.ebuild b/sci-chemistry/caver/caver-0.99.2.ebuild
new file mode 100644
index 000000000000..7d6ea5374318
--- /dev/null
+++ b/sci-chemistry/caver/caver-0.99.2.ebuild
@@ -0,0 +1,50 @@
+# Copyright 1999-2006 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/caver/caver-0.99.2.ebuild,v 1.1 2006/05/14 06:12:45 spyderous Exp $
+
+inherit multilib python
+
+MY_PN="${PN}_unix"
+MY_P="${MY_PN}_v${PV}"
+PLUG_P="${MY_P/caver/caverPLUG}"
+DESCRIPTION="Rapid, accurate and fully automated calculation of pathways leading from buried cavities to outside solvent in static and dynamic protein structures"
+HOMEPAGE="http://viper.chemi.muni.cz/caver/"
+SRC_URI="${MY_P}.tar.gz
+	pymol? ( ${PLUG_P}.tar.gz )"
+LICENSE="CAVER"
+SLOT="0"
+KEYWORDS="~ppc ~x86"
+IUSE="pymol"
+RDEPEND="media-libs/qhull
+	pymol? ( sci-chemistry/pymol )"
+DEPEND="${RDEPEND}"
+RESTRICT="fetch"
+S="${WORKDIR}/${MY_P}"
+
+pkg_nofetch() {
+	einfo "Download ${MY_P}.tar.gz"
+	if use pymol; then
+		einfo "and ${PLUG_P}.tar.gz"
+	fi
+	einfo "from ${HOMEPAGE}. This requires registration."
+	einfo "Place tarballs in ${DISTDIR}."
+}
+
+src_install() {
+	make DESTDIR="${D}" install
+	if use pymol; then
+		python_version
+		sed -i \
+			-e "s:^\(CAVER_BINARY_LOCATION\).*:\1 = \"${ROOT}usr/bin/caver\":g" \
+			${WORKDIR}/${PLUG_P}/caver.py
+		insinto /usr/$(get_libdir)/python${PYVER}/site-packages/pmg_tk/startup
+		doins ${WORKDIR}/${PLUG_P}/caver.py
+	fi
+}
+
+pkg_postinst() {
+	if use pymol; then
+		python_mod_compile \
+		/usr/$(get_libdir)/python${PYVER}/site-packages/pmg_tk/startup/caver.py
+	fi
+}
diff --git a/sci-chemistry/caver/files/digest-caver-0.99.2 b/sci-chemistry/caver/files/digest-caver-0.99.2
new file mode 100644
index 000000000000..d8d6005ce856
--- /dev/null
+++ b/sci-chemistry/caver/files/digest-caver-0.99.2
@@ -0,0 +1,6 @@
+MD5 e498466fa232d17fb483cc4568576d2b caverPLUG_unix_v0.99.2.tar.gz 81270
+RMD160 58a5b2b7a1efe41a86d507831f754419ae912b12 caverPLUG_unix_v0.99.2.tar.gz 81270
+SHA256 5b7ca30f26023e2ed9eda6a5430ca5db0ebef7b34f7f8d2391a49182ec0663b1 caverPLUG_unix_v0.99.2.tar.gz 81270
+MD5 b258994fab2957ab20eac77d7a74c276 caver_unix_v0.99.2.tar.gz 1152263
+RMD160 01b877bef15d0f0e1ccce8a3dbcda83826ba76c5 caver_unix_v0.99.2.tar.gz 1152263
+SHA256 9934b5e80f375159132c5327df1fa8bd19ce90682c04c4cd9b91e62476e0f98b caver_unix_v0.99.2.tar.gz 1152263