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author | 2011-03-18 10:22:58 +0000 | |
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committer | 2011-03-18 10:22:58 +0000 | |
commit | 550b256d99c0616c8d88ea3a97820beb87864ebe (patch) | |
tree | a167b7ea3768d86f5ef1671542be4b27d6ead12d /sci-chemistry/pymol-plugins-caver | |
parent | Fix slot-deps on gtk+ and other libs (diff) | |
download | historical-550b256d99c0616c8d88ea3a97820beb87864ebe.tar.gz historical-550b256d99c0616c8d88ea3a97820beb87864ebe.tar.bz2 historical-550b256d99c0616c8d88ea3a97820beb87864ebe.zip |
Moved from sci-chemistry/caver to sci-chemistry/pymol-plugins-caver, Version Bump
Package-Manager: portage-2.2.0_alpha27/cvs/Linux x86_64
Diffstat (limited to 'sci-chemistry/pymol-plugins-caver')
5 files changed, 166 insertions, 0 deletions
diff --git a/sci-chemistry/pymol-plugins-caver/ChangeLog b/sci-chemistry/pymol-plugins-caver/ChangeLog new file mode 100644 index 000000000000..b41e77a946b0 --- /dev/null +++ b/sci-chemistry/pymol-plugins-caver/ChangeLog @@ -0,0 +1,13 @@ +# ChangeLog for sci-chemistry/pymol-plugins-caver +# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-caver/ChangeLog,v 1.1 2011/03/18 10:22:58 jlec Exp $ + +*pymol-plugins-caver-2.1.2 (18 Mar 2011) +*pymol-plugins-caver-2.1.1 (18 Mar 2011) + + 18 Mar 2011; Justin Lecher <jlec@gentoo.org> + +pymol-plugins-caver-2.1.1.ebuild, +pymol-plugins-caver-2.1.2.ebuild, + +metadata.xml: + Moved from sci-chemistry/caver to sci-chemistry/pymol-plugins-caver, Version + Bump + diff --git a/sci-chemistry/pymol-plugins-caver/Manifest b/sci-chemistry/pymol-plugins-caver/Manifest new file mode 100644 index 000000000000..7731b17b3b6a --- /dev/null +++ b/sci-chemistry/pymol-plugins-caver/Manifest @@ -0,0 +1,16 @@ +-----BEGIN PGP SIGNED MESSAGE----- +Hash: SHA1 + +DIST Caver2_1_1_pymol_plugin.zip 5695137 RMD160 205cc36a040b7dcc1112e2e747d4d0c97806c285 SHA1 a7a2849c75074f596bb583d90679e96356622cda SHA256 367e3e37569219ef011d769e9109897c3e26a870a94e9132480768c027571da3 +DIST Caver2_1_2_pymol_plugin.zip 5698331 RMD160 497c21bd26e20af77d2504b128f35e51e7852e1b SHA1 caac1f15716e5cc0888df7d6f017152cedeb7dc9 SHA256 1dcc61ba13247c05710c4cd68491d0c867ce1d0c11c824be85a516250b2874e3 +EBUILD pymol-plugins-caver-2.1.1.ebuild 1558 RMD160 793758f496d45ce1984dd777c0045715a0ab8928 SHA1 5cde71c9dfae5a26698b17a4ec4518fc3c4118db SHA256 45c363d0f0aa6b927ddd61af1d5e7f57e7bc58694684b51ec6efbc9b6af11c6b +EBUILD pymol-plugins-caver-2.1.2.ebuild 1558 RMD160 5cb73d2472587ce1944615834f19b42ded063913 SHA1 081aac0da9e31d8005b22f512074f9626ae1d12a SHA256 2bc55ae57121147251fcd0869879fd15cf257c4b143d7cd5e6080549308b2f66 +MISC ChangeLog 543 RMD160 4aaa7b155b2e3a9db9855366675f3be2ed78694b SHA1 79d2c56fed8935a32c1c6a7e0c752d504a34593a SHA256 8c473004253447cd4ac153d0350dfcb9b45bcfb5533fb951e25ff61150292586 +MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852 +-----BEGIN PGP SIGNATURE----- +Version: GnuPG v2.0.17 (GNU/Linux) + +iEYEARECAAYFAk2DMogACgkQgAnW8HDreRbCogCghcKv5UbLsPXbcTiOXsrbd3cu +8EwAnRwZ4rpOjQ+wPlKfmSf+cSvQTpKX +=wdM9 +-----END PGP SIGNATURE----- diff --git a/sci-chemistry/pymol-plugins-caver/metadata.xml b/sci-chemistry/pymol-plugins-caver/metadata.xml new file mode 100644 index 000000000000..9ac9ffdb3a41 --- /dev/null +++ b/sci-chemistry/pymol-plugins-caver/metadata.xml @@ -0,0 +1,5 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci-chemistry</herd> +</pkgmetadata> diff --git a/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.1.ebuild b/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.1.ebuild new file mode 100644 index 000000000000..7e044a08f28f --- /dev/null +++ b/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.1.ebuild @@ -0,0 +1,66 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.1.ebuild,v 1.1 2011/03/18 10:22:58 jlec Exp $ + +EAPI="3" + +SUPPORT_PYTHON_ABIS="1" +RESTRICT_PYTHON_ABIS="2.4 3.*" + +inherit multilib python eutils versionator java-utils-2 + +MY_PV="$(replace_all_version_separators _)" +MY_P="Caver${MY_PV}_pymol_plugin" + +DESCRIPTION="Calculation of pathways from buried cavities to outside solvent in protein structures" +HOMEPAGE="http://loschmidt.chemi.muni.cz/caver/" +SRC_URI="${MY_P}.zip" + +LICENSE="CAVER" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +RDEPEND=" + >=virtual/jre-1.6 + sci-chemistry/pymol" +DEPEND="app-arch/unzip" + +RESTRICT="fetch" + +S="${WORKDIR}/${MY_P}"/linux_mac + +pkg_nofetch() { + elog "Download ${A}" + elog "from ${HOMEPAGE}. This requires registration." + elog "Place tarballs in ${DISTDIR}." +} + +src_prepare() { + python_copy_sources +} + +src_install() { + java-pkg_dojar Caver${MY_PV}/*.jar + + java-pkg_jarinto /usr/share/${PN}/lib/lib/ + java-pkg_dojar Caver${MY_PV}/lib/*.jar + + installation() { + sed \ + -e "s:directory/where/jar/with/plugin/is/located:${EPREFIX}/usr/share/${PN}/lib/:g" \ + -i Caver${MY_PV}.py || die + + insinto $(python_get_sitedir)/pmg_tk/startup/ + doins Caver${MY_PV}.py || die + } + python_execute_function -s installation +} + +pkg_postinst() { + python_mod_optimize pmg_tk/startup/Caver${MY_PV}.py +} + +pkg_postrm() { + python_mod_cleanup pmg_tk/startup/Caver${MY_PV}.py +} diff --git a/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild b/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild new file mode 100644 index 000000000000..87f97bb1cf2d --- /dev/null +++ b/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild @@ -0,0 +1,66 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-caver/pymol-plugins-caver-2.1.2.ebuild,v 1.1 2011/03/18 10:22:58 jlec Exp $ + +EAPI="3" + +SUPPORT_PYTHON_ABIS="1" +RESTRICT_PYTHON_ABIS="2.4 3.*" + +inherit multilib python eutils versionator java-utils-2 + +MY_PV="$(replace_all_version_separators _)" +MY_P="Caver${MY_PV}_pymol_plugin" + +DESCRIPTION="Calculation of pathways from buried cavities to outside solvent in protein structures" +HOMEPAGE="http://loschmidt.chemi.muni.cz/caver/" +SRC_URI="${MY_P}.zip" + +LICENSE="CAVER" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +RDEPEND=" + >=virtual/jre-1.6 + sci-chemistry/pymol" +DEPEND="app-arch/unzip" + +RESTRICT="fetch" + +S="${WORKDIR}/${MY_P}"/linux_mac + +pkg_nofetch() { + elog "Download ${A}" + elog "from ${HOMEPAGE}. This requires registration." + elog "Place tarballs in ${DISTDIR}." +} + +src_prepare() { + python_copy_sources +} + +src_install() { + java-pkg_dojar Caver${MY_PV}/*.jar + + java-pkg_jarinto /usr/share/${PN}/lib/lib/ + java-pkg_dojar Caver${MY_PV}/lib/*.jar + + installation() { + sed \ + -e "s:directory/where/jar/with/plugin/is/located:${EPREFIX}/usr/share/${PN}/lib/:g" \ + -i Caver${MY_PV}.py || die + + insinto $(python_get_sitedir)/pmg_tk/startup/ + doins Caver${MY_PV}.py || die + } + python_execute_function -s installation +} + +pkg_postinst() { + python_mod_optimize pmg_tk/startup/Caver${MY_PV}.py +} + +pkg_postrm() { + python_mod_cleanup pmg_tk/startup/Caver${MY_PV}.py +} |