summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJustin Lecher <jlec@gentoo.org>2014-05-14 12:03:25 +0000
committerJustin Lecher <jlec@gentoo.org>2014-05-14 12:03:25 +0000
commitf31fe3c914c0ce16664f6a0188b3c7e229810f48 (patch)
treed5d7b04647bb95bce61b27cbcd19a64957ec3c17 /sci-biology
parentsci-biology/update-blastdb: New addition, written by me (diff)
downloadhistorical-f31fe3c914c0ce16664f6a0188b3c7e229810f48.tar.gz
historical-f31fe3c914c0ce16664f6a0188b3c7e229810f48.tar.bz2
historical-f31fe3c914c0ce16664f6a0188b3c7e229810f48.zip
sci-biology/update-blastdb: New addition, written by me
Package-Manager: portage-2.2.10/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB!
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/update-blastdb/Manifest26
-rw-r--r--sci-biology/update-blastdb/metadata.xml5
-rw-r--r--sci-biology/update-blastdb/update-blastdb-12.0.0.ebuild29
3 files changed, 58 insertions, 2 deletions
diff --git a/sci-biology/update-blastdb/Manifest b/sci-biology/update-blastdb/Manifest
index 32edb2e344da..976cb6a1b9c8 100644
--- a/sci-biology/update-blastdb/Manifest
+++ b/sci-biology/update-blastdb/Manifest
@@ -1,4 +1,26 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA512
+
DIST ncbi_cxx--12_0_0.tar.gz 37925914 SHA256 432d5c72cc02dad263f1b2f1ab875e04e60b1ded0c5537ed54e8095b50554d20 SHA512 1a79f2d95960efde6263289814102499460ec235dad36337dd398d668665e44015e06e40fd0e66a8fb16f526d326949adcaadcb667debeba5d8570b1a92e30ed WHIRLPOOL 16f0b6de7e0d898bca7a2a46a64a4aa0795f99673d4715a21cca2dc5aa728143b56f02ad9c108543195a8f86f4267777d2be9428dcf52f5495083a63961ad867
-EBUILD update-blastdb-12.0.0.ebuild 666 SHA256 ad8df12016f107ae359f9b1fe5855d03cecea4991655a8bde810f32352bd29f6 SHA512 b25a31ea00f94b8ddfb85a5357f30c8810c571c0d1aaac56c124fa381aeee997f6b4f271ca75f05dc02b0e8443f68504e67c0b53500955cd81b93d621f24f116 WHIRLPOOL 57be8c35d6798f6d59b55d87298beb766094f6e76065ef59415a855f7ac9d39586a36c26f643e2c1f1159dc917128f8af9655bf3847232d93c3c357f0cbe25a5
-MISC ChangeLog 291 SHA256 6dbb4e991a6eaf1e21cb6819500718dfefc3fcdcc12df7f60017593266e4fdc1 SHA512 2fa7615d02a1c6980ecc86385da5820bef535c1f1d1eb31cba9cbf8660e823679f678fa18842897ac3062d2e1b850172ccf00ceb5e3a0813196a3d3ea598b17f WHIRLPOOL b86ceea6f82661a384b78f9d2ac1e5fcfeeb066e193b1fd73749bd414451c3c1b4610b21996d0e14fa050ac244da059021ae3aae9c2ecbf436a0c2cf87df152f
+EBUILD update-blastdb-12.0.0.ebuild 781 SHA256 db2b17314a94118c3549370fa65e61b9761db84e7f9ab8dadf7976d324ebe9a4 SHA512 1bdd2624a0b05ba38642f665eda371246325cce22de8d130360ff07af6dfe9511676aa11ee3c212769d888617c9d526d8bb315d37474c5246f6239d5f1bb31bd WHIRLPOOL e7906d9335650d45d76540f8b3a8f23d908599f5e5e8e309e2de9c330d7c107935a0eb85cfddd6548e84f8ff754991762444c1656323638191fe85c2bc151ed4
+MISC ChangeLog 387 SHA256 86678abc7d9d10554fe0d4bd2cb3df324cd16f4ac15931cc9df8689180eb4a0a SHA512 04eb58156b36415e9dfcbd53c7b1125710e7199fccf61e6d4ef81abced23451f25847254cb7b7bf654e338dc9f13345173c343cb2f2c9671fbcfb5e4a5ec9397 WHIRLPOOL 6a0e9712874faa15fef560babec598e665e1f2dbfeea23fd6901840af7d7c123c2e312ad825805f5f7ef5aa1c8376ff3a8dfa574ddd167260aed89c200690034
MISC metadata.xml 166 SHA256 29b228f683c71345323d841414e410c929a320f34536eb30910498728260c8ac SHA512 51c5345bb1c4466b73e2feac8895c64fc119365e7f2c156702f4c93664d3aba028b3da9daaabf24f61a88220345fca7806771a252e8ae906cac5dec97862c7e0 WHIRLPOOL 211bf955d94fc1d93b12388a2c597a8d440fb5d78f84d59b2549569537098c3525b1fbab707441d62fabe20edcac2fd9ebe09c5d9870f1c9558d7ee90d5db5b3
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.22 (GNU/Linux)
+
+iQJ8BAEBCgBmBQJTc1uNXxSAAAAAAC4AKGlzc3Vlci1mcHJAbm90YXRpb25zLm9w
+ZW5wZ3AuZmlmdGhob3JzZW1hbi5uZXQyQ0JDQjFGMzBDQ0UxMjFGNENDNDgxMDdC
+OUQ0RjIzMUJEMTU1OEFCAAoJELnU8jG9FVir+GwP/3rc9L8NvhpfnPAjB6+VpQ8s
+Njp5yB6yNhME9AprF7Z/YU5GG6wD4aFGb5/Z5o0kKcgOLBJ93+HzzyVObFPXx8G4
+GQ0zVI7E6kzD7DWKbR2lEz/bTKA1TXgwiG3SjrdXUfnXbpW9EL6NXuK3eRw+9byL
+57Oks00iPuQkABnrOCgd+MBosNDoWIYjygdeJx8hZxyPf1NPJR/w/w33vN+DQTQ8
+vtStpn1DWa9yymudlBZhMeeCrcN+7FO0rEuBx1lV4chtzj9pYw0NyIHSOWmI4omR
+U3vvXpwTG8AKJHKLqCUQ2CjQhOrgpjZ0IL23a7Br/7JvXfToEoncOpDGgcIf24Io
+7peMqbsYQueYgkyzOgR5n6ZIMtm2b1x6uzYC1PVOpUqQsG2QsNYKZn4ObmTWDaP/
+Tpvn3ew9EUR7C7IKmRoK0YjlRceLnpZrHdUiV3E9QpNDkMd+zASEhpKdWaXCWMQj
+Rg7vqgYoA9yJGXVArORZkq5OOS3rIWuluPQ8R/zmXNWI2mcg2wEukBxomTKobkh7
+dzLl904O3MblN47xOXr9A6kLkji7OCgXzX4DxpStVWrIku6BHkc9YOuDYJduEFD9
+0yJiIhc//3Iame5K/g1elCqA3buTJc9x4EewIkDtkG51FNgP1b0Z73kWM0yLJlQC
+7UYY7cKbB2DSSYHK0Pai
+=icrq
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/update-blastdb/metadata.xml b/sci-biology/update-blastdb/metadata.xml
new file mode 100644
index 000000000000..f17a827e3101
--- /dev/null
+++ b/sci-biology/update-blastdb/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/update-blastdb/update-blastdb-12.0.0.ebuild b/sci-biology/update-blastdb/update-blastdb-12.0.0.ebuild
new file mode 100644
index 000000000000..a7d49a682c32
--- /dev/null
+++ b/sci-biology/update-blastdb/update-blastdb-12.0.0.ebuild
@@ -0,0 +1,29 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/update-blastdb/update-blastdb-12.0.0.ebuild,v 1.1 2014/05/14 12:03:24 jlec Exp $
+
+EAPI=5
+
+inherit versionator
+
+MY_PV="$(replace_all_version_separators _)"
+
+DESCRIPTION="update_blastdb.pl for local blst db maintainance"
+HOMEPAGE="http://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=toolkit"
+SRC_URI="ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/ARCHIVE/${MY_PV}/ncbi_cxx--${MY_PV}.tar.gz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+RDEPEND="
+ dev-lang/perl
+ !sci-biology/ncbi-tools++"
+DEPEND=""
+
+S="${WORKDIR}"
+
+src_install() {
+ dobin ncbi_cxx--${MY_PV}/src/app/blast/update_blastdb.pl
+}