New version (604). Removed old version (512). Added 603 to x86.

Package-Manager: portage-2.0.54

7 files changed, 23 insertions, 69 deletions

diff --git a/sci-biology/prosite/Manifest b/sci-biology/prosite/Manifest
index 7aa3dcac936c..cafc2f046189 100644
--- a/sci-biology/prosite/Manifest
+++ b/sci-biology/prosite/Manifest
@@ -1,42 +1,8 @@
-MD5 24d6411d6120650743e2c49bee03c9cf ChangeLog 11915
-RMD160 e2fa6a2dd64eef70172d7a763e99bae0e9ab8d53 ChangeLog 11915
-SHA256 0f15e3025394d63c1642edb7147fa79c01504463d3509bf0550f260e8c0b03d3 ChangeLog 11915
-MD5 2f35d065ff4b9256d80f3923fa864c5c files/digest-prosite-19.16 67
-RMD160 fe669c23fd4cad9e4bb61e3fe24cd11a544eee90 files/digest-prosite-19.16 67
-SHA256 bc527623b4a4462badfc534a31167d6481e0c6f9bdd7c692d79ad9ada2af5cbe files/digest-prosite-19.16 67
-MD5 88309b107f8fd9445fb2370e95506eff files/digest-prosite-19.17 67
-RMD160 4698c250c8d9fdf1b57ee8e7283a1cd12ee41858 files/digest-prosite-19.17 67
-SHA256 daa20d7935177e72692da67cc418684c719e7decda65e091ff1ccfafec48a7b6 files/digest-prosite-19.17 67
+MD5 3a92f25e7de1da72f674ae2be236b483 ChangeLog 12200
 MD5 a652d8b43037190415fe10e9282d838f files/digest-prosite-19.18 67
-RMD160 dbda98722b5c60df16cc2520ea5bd74bde7846eb files/digest-prosite-19.18 67
-SHA256 c08859bc6f93dd250ac7e19968c31467da734c4c408ae48d59b1b9c9a8a47603 files/digest-prosite-19.18 67
-MD5 db4add7ca9d25fb3c90e646c88d6f562 files/digest-prosite-19.19 67
-RMD160 46a87c396366cc756097815f2245153bc1cada79 files/digest-prosite-19.19 67
-SHA256 fd4788c8dc4520b4ffc54a20a33e73ea0cf0fceda2295860a115e6145ff39ce0 files/digest-prosite-19.19 67
-MD5 9676c19817d33959f3d396ba9bd29642 files/digest-prosite-19.20 67
-RMD160 bd84a5ac854848a646a1b8ea8865c76978e301e6 files/digest-prosite-19.20 67
-SHA256 a7b26bc40e915ed2ee01677c5d52dc7b5058d2990f0b62b402d13fc0f1cfc88a files/digest-prosite-19.20 67
 MD5 ce741f14b29ee8a8a5109073ea6940be files/digest-prosite-19.22 67
-RMD160 1dac4320fd74273cd2f25c9cdb1d756702895884 files/digest-prosite-19.22 67
-SHA256 0fbb3284b3f7fa11b54d71acca205b639217a0c1202c3888e58f7b32cb55546d files/digest-prosite-19.22 67
+MD5 223ab13995f26bd3ac9a7ae7f62b48e2 files/digest-prosite-19.25 67
 MD5 81b73af5f2f4778bea2dde0b55620129 metadata.xml 810
-RMD160 a0acc8bc90197c6e5e9814044b11a02f15e4c398 metadata.xml 810
-SHA256 432b03b079022cf13e6cdbcb2455fb10ac5a95a8b3f41c63f76212a5e7f67c65 metadata.xml 810
-MD5 fd8571a2c6a6d2a8c66c39dfb6bcefe2 prosite-19.16.ebuild 1240
-RMD160 45814dfb20b6f877b9952ff6ef4f68e55c6e44a2 prosite-19.16.ebuild 1240
-SHA256 0fcf024a6c3f15a5e4d7db6db4063bfd604bb9d58e9ab5fdfa489d38050c315c prosite-19.16.ebuild 1240
-MD5 98de3c18be9fae196528dc1ae064a614 prosite-19.17.ebuild 1246
-RMD160 2d0794ca45fd388ec1283237db5e1088f06a5793 prosite-19.17.ebuild 1246
-SHA256 f93c4086e3fd3c6cce86fb191e1b8172e2305de3360eda55e29f064819b8759f prosite-19.17.ebuild 1246
 MD5 5e233aab7067a2aa6da2570c9384fcf3 prosite-19.18.ebuild 1238
-RMD160 e2171cdcfbce01b193b900b54b569e6bd2bd51fb prosite-19.18.ebuild 1238
-SHA256 8549399d2377b660839183a4d4f26c19755890b1c6f7a1d178b6e1dc718de668 prosite-19.18.ebuild 1238
-MD5 4bc992bd06b47b580178c21734648c37 prosite-19.19.ebuild 1246
-RMD160 658320982caa1c7cde80b465e7b49d34be2392b7 prosite-19.19.ebuild 1246
-SHA256 9465431c4f32fe918b2c8f41144c1d4de5367d81814a4d56421e94d7b2fa9e43 prosite-19.19.ebuild 1246
-MD5 3521d2f54ad4949ea85492479fb905c9 prosite-19.20.ebuild 1246
-RMD160 f55a25984cfb7fccec7bcba50b2693a34c2328ee prosite-19.20.ebuild 1246
-SHA256 121f3266f4330d4e88bfe7814429c38cbd99413043eb9db44099965e91658fbd prosite-19.20.ebuild 1246
-MD5 2d9cef59b19b0a633275318612a9cbbb prosite-19.22.ebuild 1246
-RMD160 ddc8c937e0f5329c75aa74b0244968a8a44f85df prosite-19.22.ebuild 1246
-SHA256 b3c93909ed74e6c44e332be635a012c86c8664e14c0570a671e7bba1113ae334 prosite-19.22.ebuild 1246
+MD5 207d03d1837fc6f02a5824821009eab1 prosite-19.22.ebuild 1245
+MD5 5358bcb8e0d54fda42345f6c20b8c23e prosite-19.25.ebuild 1246
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index da16c24d6330..ef348d508404 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/rebase
 # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.61 2006/04/08 10:32:19 blubb Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.62 2006/04/19 15:04:44 ribosome Exp $
+
+*rebase-604 (19 Apr 2006)
+
+  19 Apr 2006; Olivier Fisette <ribosome@gentoo.org> -rebase-512.ebuild,
+  rebase-603.ebuild, +rebase-604.ebuild:
+  New version (604). Removed old version (512). Added 603 to x86.
 
   08 Apr 2006; Simon Stelling <blubb@gentoo.org> rebase-601-r1:
   stable on amd64
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index ef498dcf9d2b..227675929ef2 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,30 +1,10 @@
-MD5 591f3f6d6f6010c03a6ca6eb96fa983a ChangeLog 8384
-RMD160 04b638741aa52df074182745be8c45f602f2e2d1 ChangeLog 8384
-SHA256 0bf956b3917e29ed8fdd367ca8467e6fc08c502db47bf645744070ea0b0a64a3 ChangeLog 8384
-MD5 0327e485fe0040317dd1016583b0d76d files/digest-rebase-512 63
-RMD160 da0977a8bd82283fb9f713ada1bd99cf102261ce files/digest-rebase-512 63
-SHA256 13c140a92f51b0ea6c4901606fad7fb9f970680beee3904e9454132d699a90f7 files/digest-rebase-512 63
+MD5 df38ff2b55f3766925b44deecee323b9 ChangeLog 8595
 MD5 9b37c587b84cf914d6f9a9b616c493db files/digest-rebase-601-r1 63
-RMD160 a3685b540b325e1e6f26caf1843a07476771dd59 files/digest-rebase-601-r1 63
-SHA256 d2c68d331d68ca3431d7f39ae76cea9c6972766b24d45c68fc6cbe617d0a36e2 files/digest-rebase-601-r1 63
 MD5 d652b16d7ec999abd36a1e222a7b0ca9 files/digest-rebase-602 63
-RMD160 b41adf63e5de4f2c66e32bf1d65ea0e9d2e2d736 files/digest-rebase-602 63
-SHA256 cb89e9c7f5bdf4438d4e35b0e5c6c3a1e42a8182607080b3116fcb977ef07610 files/digest-rebase-602 63
 MD5 5bd3ee69a92fe75245399d6d3ba20f42 files/digest-rebase-603 63
-RMD160 a9f6cf6e667166e1440b640c0cc08b46e95d1c7d files/digest-rebase-603 63
-SHA256 0fa55cf80a22d454b2a5498e1badddc10a86bbaf3a35c33975192e15384c12c6 files/digest-rebase-603 63
+MD5 4f02d3bb980067219d3f02f90b16ad01 files/digest-rebase-604 63
 MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900
-RMD160 6124f8e0fba32951daaba2f52d7f6f0f00233b2d metadata.xml 900
-SHA256 e947dfc382096458c2183dc90fe7add203f8a6d86ccdfea668176451d58e2e7d metadata.xml 900
-MD5 292928f0068bac8ab37a29c223af581e rebase-512.ebuild 1238
-RMD160 4dc23297f81069f315445fb30e652878c0722a97 rebase-512.ebuild 1238
-SHA256 ffcf6a7746df03153fe059d7ae827c61d48954905ed27d9f6bde28e1ef32bb38 rebase-512.ebuild 1238
 MD5 e21bd3a6974c61c4c0328f66719200a4 rebase-601-r1.ebuild 1355
-RMD160 4c82189c82c7bdd8ea3c9cb88f66dc40b9a665f6 rebase-601-r1.ebuild 1355
-SHA256 d045583304fc5bb4894e817d40e70702d62d6464a7b189a3fd1b2bafbd0f374e rebase-601-r1.ebuild 1355
 MD5 9383effacdb187a2360dbb1112eb3ba7 rebase-602.ebuild 1360
-RMD160 61a278486d31734cb0cd0b0faa0f9b096cce90c7 rebase-602.ebuild 1360
-SHA256 f088d3941d71b53f5c1493caf6c8d9907c31e7bc976436bf62af448379f6001e rebase-602.ebuild 1360
-MD5 b0d5a487522cc90e6dea45e891fa457e rebase-603.ebuild 1360
-RMD160 4b74dbe4f3a56352182c56f21bbce564ee45d616 rebase-603.ebuild 1360
-SHA256 70f884c50d891ea51e32172c4147e0c498340dfd26badf271a57385f2603886c rebase-603.ebuild 1360
+MD5 e321d998f866e3a6f2f907d987156b70 rebase-603.ebuild 1359
+MD5 0f4df2456dcc342843c90c6f68656a54 rebase-604.ebuild 1360
diff --git a/sci-biology/rebase/files/digest-rebase-512 b/sci-biology/rebase/files/digest-rebase-512
deleted file mode 100644
index bba693251f6b..000000000000
--- a/sci-biology/rebase/files/digest-rebase-512
+++ /dev/null
@@ -1 +0,0 @@
-MD5 873b7b7b95843e6263c9742fd2b7f4df rebase-512.tar.bz2 181660
diff --git a/sci-biology/rebase/files/digest-rebase-604 b/sci-biology/rebase/files/digest-rebase-604
new file mode 100644
index 000000000000..730df55bc3b4
--- /dev/null
+++ b/sci-biology/rebase/files/digest-rebase-604
@@ -0,0 +1 @@
+MD5 8413205fe9afa52c5dca361ab8290b0b rebase-604.tar.bz2 182610
diff --git a/sci-biology/rebase/rebase-603.ebuild b/sci-biology/rebase/rebase-603.ebuild
index 013093440312..50299b9f0674 100644
--- a/sci-biology/rebase/rebase-603.ebuild
+++ b/sci-biology/rebase/rebase-603.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2006 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-603.ebuild,v 1.1 2006/03/15 14:34:54 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-603.ebuild,v 1.2 2006/04/19 15:04:44 ribosome Exp $
 
 DESCRIPTION="A restriction enzyme database"
 LICENSE="public-domain"
@@ -11,7 +11,7 @@ SLOT="0"
 # Minimal build keeps only the indexed files (if applicable) and the
 # documentation. The non-indexed database is not installed.
 IUSE="emboss minimal"
-KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
+KEYWORDS="x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
 
 DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )"
 
diff --git a/sci-biology/rebase/rebase-512.ebuild b/sci-biology/rebase/rebase-604.ebuild
index 70f6d406117c..dc7905e41eb9 100644
--- a/sci-biology/rebase/rebase-512.ebuild
+++ b/sci-biology/rebase/rebase-604.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2006 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-512.ebuild,v 1.6 2006/01/18 21:28:24 corsair Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-604.ebuild,v 1.1 2006/04/19 15:04:44 ribosome Exp $
 
 DESCRIPTION="A restriction enzyme database"
 LICENSE="public-domain"
@@ -11,9 +11,9 @@ SLOT="0"
 # Minimal build keeps only the indexed files (if applicable) and the
 # documentation. The non-indexed database is not installed.
 IUSE="emboss minimal"
-KEYWORDS="amd64 ppc ppc-macos ppc64 x86"
+KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
 
-DEPEND="emboss? ( sci-biology/emboss )"
+DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )"
 
 src_compile() {
 	if use emboss; then
@@ -37,5 +37,7 @@ src_install() {
 		insinto /usr/share/EMBOSS/data/REBASE
 		doins REBASE/{embossre.enz,embossre.ref,embossre.sup} || die \
 			"Failed to install EMBOSS data files."
+		insinto /usr/share/EMBOSS/data
+		doins embossre.equ || die "Failed to install enzyme prototypes file."
 	fi
 }