diff options
author | Olivier Fisette <ribosome@gentoo.org> | 2007-07-18 02:40:41 +0000 |
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committer | Olivier Fisette <ribosome@gentoo.org> | 2007-07-18 02:40:41 +0000 |
commit | 7a0e7c1722805a45dba1ecdb2d49066d6ed2f1a0 (patch) | |
tree | 4be83c86d3ddb223027859e45415c178812d245f /sci-biology | |
parent | Marked stable on amd64. (diff) | |
download | historical-7a0e7c1722805a45dba1ecdb2d49066d6ed2f1a0.tar.gz historical-7a0e7c1722805a45dba1ecdb2d49066d6ed2f1a0.tar.bz2 historical-7a0e7c1722805a45dba1ecdb2d49066d6ed2f1a0.zip |
We still need an AMD64 ebuild for EMBOSS 4.0.0 (my mistake).
Package-Manager: portage-2.1.2.9
Diffstat (limited to 'sci-biology')
-rw-r--r-- | sci-biology/embassy-mse/ChangeLog | 6 | ||||
-rw-r--r-- | sci-biology/embassy-mse/Manifest | 15 | ||||
-rw-r--r-- | sci-biology/embassy-mse/embassy-mse-1.0.0-r4.ebuild | 21 | ||||
-rw-r--r-- | sci-biology/embassy-mse/files/digest-embassy-mse-1.0.0-r4 | 6 | ||||
-rw-r--r-- | sci-biology/embassy/Manifest | 15 |
5 files changed, 54 insertions, 9 deletions
diff --git a/sci-biology/embassy-mse/ChangeLog b/sci-biology/embassy-mse/ChangeLog index 6fdaa7b16ed1..05ad9cebe103 100644 --- a/sci-biology/embassy-mse/ChangeLog +++ b/sci-biology/embassy-mse/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-mse # Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.26 2007/07/18 01:47:45 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.27 2007/07/18 02:40:41 ribosome Exp $ + + 18 Jul 2007; Olivier Fisette <ribosome@gentoo.org> + +embassy-mse-1.0.0-r4.ebuild: + We still need an AMD64 ebuild for EMBOSS 4.0.0 (my mistake). 18 Jul 2007; Olivier Fisette <ribosome@gentoo.org> -embassy-mse-1.0.0-r4.ebuild: diff --git a/sci-biology/embassy-mse/Manifest b/sci-biology/embassy-mse/Manifest index 611b7dd8d3ca..9fb6860aa33c 100644 --- a/sci-biology/embassy-mse/Manifest +++ b/sci-biology/embassy-mse/Manifest @@ -6,14 +6,18 @@ EBUILD embassy-mse-1.0.0-r3.ebuild 582 RMD160 c5447ef4d9886fcff90c8a7ba5e9bf7f8f MD5 e5350a5bd67bc450ebf8398ae24f3203 embassy-mse-1.0.0-r3.ebuild 582 RMD160 c5447ef4d9886fcff90c8a7ba5e9bf7f8f0e8f00 embassy-mse-1.0.0-r3.ebuild 582 SHA256 b53ae6dfbf1aef00dfa98174e294e214ffa4b01a4f7c4f0a586429978bde83ca embassy-mse-1.0.0-r3.ebuild 582 +EBUILD embassy-mse-1.0.0-r4.ebuild 738 RMD160 eacbbfc155a1c102a27fe7b8c3784a741746afe6 SHA1 eb2277c2290ea958a3c71434db929aaa34da6759 SHA256 bd5d95b9545081cb1e071a9cef8c3f5b6ecb4a7a64bea9fe41fca0691187aa64 +MD5 90f4deb9e977960b379ca8e8553d46d9 embassy-mse-1.0.0-r4.ebuild 738 +RMD160 eacbbfc155a1c102a27fe7b8c3784a741746afe6 embassy-mse-1.0.0-r4.ebuild 738 +SHA256 bd5d95b9545081cb1e071a9cef8c3f5b6ecb4a7a64bea9fe41fca0691187aa64 embassy-mse-1.0.0-r4.ebuild 738 EBUILD embassy-mse-1.0.0-r5.ebuild 732 RMD160 44cb0f71e8345eaad71ce31e4f7b0a051a0231e6 SHA1 750a61639cceac29cc0662dee4f5fc06d35cbdc3 SHA256 d86ad721a367c5f8913085c4b8428fae628293e0c36d979c643052ae2206f567 MD5 316391140bdc549398f4755b94d22ee5 embassy-mse-1.0.0-r5.ebuild 732 RMD160 44cb0f71e8345eaad71ce31e4f7b0a051a0231e6 embassy-mse-1.0.0-r5.ebuild 732 SHA256 d86ad721a367c5f8913085c4b8428fae628293e0c36d979c643052ae2206f567 embassy-mse-1.0.0-r5.ebuild 732 -MISC ChangeLog 3847 RMD160 ad847f6f8b5cd76f8f0fe83a8fc0818720bab57d SHA1 612176a1e2930c55a6f60344754bb1cce35e904b SHA256 d9cbc8b8c59fb67d83dbaf88e11b21cfa662070c30664177f5f5937f2eb16550 -MD5 7462687ae2dca22dd6b39e9cc22c2859 ChangeLog 3847 -RMD160 ad847f6f8b5cd76f8f0fe83a8fc0818720bab57d ChangeLog 3847 -SHA256 d9cbc8b8c59fb67d83dbaf88e11b21cfa662070c30664177f5f5937f2eb16550 ChangeLog 3847 +MISC ChangeLog 3996 RMD160 704f2381a7f075bac31afbea07bb9adbe293ac17 SHA1 74df90b60a5b79a3761da6310f98e10b0eafb678 SHA256 b528f07e03407bcd246031e64529c6ca7cf965c15d8f272c04b3da2a08fc8e57 +MD5 ae4d74363a8436299542cdc3521a9bd0 ChangeLog 3996 +RMD160 704f2381a7f075bac31afbea07bb9adbe293ac17 ChangeLog 3996 +SHA256 b528f07e03407bcd246031e64529c6ca7cf965c15d8f272c04b3da2a08fc8e57 ChangeLog 3996 MISC metadata.xml 262 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 SHA1 3c024ca60a2b93ed0e0311f6b05ef5ef117bee31 SHA256 89af818a993faf14a4a87e2f254943420156c2a317c385480a9533ba682b650f MD5 5f35ae4b4cb1cd144db7c7c093d3fd80 metadata.xml 262 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 metadata.xml 262 @@ -21,6 +25,9 @@ SHA256 89af818a993faf14a4a87e2f254943420156c2a317c385480a9533ba682b650f metadata MD5 333db965293960a1c09d13301dc60ccf files/digest-embassy-mse-1.0.0-r3 515 RMD160 c6eeff0d6c1f940bfe8f8e78c5b00b29258fa7e6 files/digest-embassy-mse-1.0.0-r3 515 SHA256 98127a6911bddf00ab10f36de745606179061592e7e90cbb4a19f1bb41e1f386 files/digest-embassy-mse-1.0.0-r3 515 +MD5 333db965293960a1c09d13301dc60ccf files/digest-embassy-mse-1.0.0-r4 515 +RMD160 c6eeff0d6c1f940bfe8f8e78c5b00b29258fa7e6 files/digest-embassy-mse-1.0.0-r4 515 +SHA256 98127a6911bddf00ab10f36de745606179061592e7e90cbb4a19f1bb41e1f386 files/digest-embassy-mse-1.0.0-r4 515 MD5 e4f4a671fe000c3bf9ffcce059e75792 files/digest-embassy-mse-1.0.0-r5 515 RMD160 12579b46237a21728ff87b6d463235f5e9bd5989 files/digest-embassy-mse-1.0.0-r5 515 SHA256 83201d328fb33304017f48c316edcb611b171026931088891f9f8bcac12a02ec files/digest-embassy-mse-1.0.0-r5 515 diff --git a/sci-biology/embassy-mse/embassy-mse-1.0.0-r4.ebuild b/sci-biology/embassy-mse/embassy-mse-1.0.0-r4.ebuild new file mode 100644 index 000000000000..d2c825be2290 --- /dev/null +++ b/sci-biology/embassy-mse/embassy-mse-1.0.0-r4.ebuild @@ -0,0 +1,21 @@ +# Copyright 1999-2007 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r4.ebuild,v 1.4 2007/07/18 02:40:41 ribosome Exp $ + +EBOV="4.0.0" + +inherit embassy + +DESCRIPTION="EMBOSS integrated version of MSE - Multiple Sequence Screen Editor" +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz + mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" + +KEYWORDS="~amd64 ~ppc ~sparc ~x86" + +src_install() { + sed -e "s:libdir = \${exec_prefix}/lib:libdir = \${exec_prefix}/$(get_libdir):g" \ + -i ckit/Makefile || die "Failed patching Makefile." + embassy_src_install + insinto /usr/include/emboss/mse + doins h/*.h +} diff --git a/sci-biology/embassy-mse/files/digest-embassy-mse-1.0.0-r4 b/sci-biology/embassy-mse/files/digest-embassy-mse-1.0.0-r4 new file mode 100644 index 000000000000..de632a1b05dc --- /dev/null +++ b/sci-biology/embassy-mse/files/digest-embassy-mse-1.0.0-r4 @@ -0,0 +1,6 @@ +MD5 2ef912cfde4903129f2424d23d6da0d2 EMBOSS-4.0.0.tar.gz 17651607 +RMD160 5b29ac2946a1315928581bf0e40a0f6b5023c599 EMBOSS-4.0.0.tar.gz 17651607 +SHA256 bbfd127adc064a5211542f3b5400cbb13c7f74d9171fd16b8531cee9fd11b231 EMBOSS-4.0.0.tar.gz 17651607 +MD5 b5f3f4ed1e74c6cf7a7d57d398a7634b embassy-4.0.0-mse-1.0.0.tar.gz 428940 +RMD160 9f4d85aed5b27ecb6e6b5f814c46fe5edfc6c66c embassy-4.0.0-mse-1.0.0.tar.gz 428940 +SHA256 9168315bcfb1a658f298891204b8b31f8faa7986e24eb513283c15cf61f8a01a embassy-4.0.0-mse-1.0.0.tar.gz 428940 diff --git a/sci-biology/embassy/Manifest b/sci-biology/embassy/Manifest index 768a869ef18a..73e118cab63f 100644 --- a/sci-biology/embassy/Manifest +++ b/sci-biology/embassy/Manifest @@ -2,10 +2,14 @@ EBUILD embassy-4.0.0.ebuild 1459 RMD160 2c19d126ef75a04282ad8ec22a541ddaf36310e2 MD5 2d2e08794489ff775f5b1d4a0db7179e embassy-4.0.0.ebuild 1459 RMD160 2c19d126ef75a04282ad8ec22a541ddaf36310e2 embassy-4.0.0.ebuild 1459 SHA256 69851568a714d9ce2092b0d25ad404e33fd40992c89d5f18252fc35ad2a13dc3 embassy-4.0.0.ebuild 1459 -MISC ChangeLog 3481 RMD160 960f49217c0ef0a56c5ac342f8c2489f902597e7 SHA1 0c460eaa3dead2372d11d5287ad7974ee7b24584 SHA256 7a03117bc73506b28350db0f61ca6f2ce1b984eb4bf00a51bad14caab29c2b25 -MD5 83aa5e7440d5dd3f4425b3ce0c7f9a22 ChangeLog 3481 -RMD160 960f49217c0ef0a56c5ac342f8c2489f902597e7 ChangeLog 3481 -SHA256 7a03117bc73506b28350db0f61ca6f2ce1b984eb4bf00a51bad14caab29c2b25 ChangeLog 3481 +EBUILD embassy-5.0.0.ebuild 1043 RMD160 0ae0c808021ebe514cc5acca266285f5e6b8954e SHA1 688dd9120823267bef2b761d47c15bf42216dbc2 SHA256 5b6a64407ef37b3051a5be2b00cd2020248717cf4cfb2d8752d23d888d514a1b +MD5 960158e3016e4d4308b2def88fd2c87a embassy-5.0.0.ebuild 1043 +RMD160 0ae0c808021ebe514cc5acca266285f5e6b8954e embassy-5.0.0.ebuild 1043 +SHA256 5b6a64407ef37b3051a5be2b00cd2020248717cf4cfb2d8752d23d888d514a1b embassy-5.0.0.ebuild 1043 +MISC ChangeLog 3659 RMD160 516a07c3a847338908663cbe93b14cd1cddf62f9 SHA1 55b3ce6c7b9ebc4421d2d657f8d72aaa33af3250 SHA256 ddf5c57ce40f5213efd37ec425e2f5bc667251e1586ac7d940d585510fadde49 +MD5 edfbfb12c3bee2a9e568b3e439c145b7 ChangeLog 3659 +RMD160 516a07c3a847338908663cbe93b14cd1cddf62f9 ChangeLog 3659 +SHA256 ddf5c57ce40f5213efd37ec425e2f5bc667251e1586ac7d940d585510fadde49 ChangeLog 3659 MISC metadata.xml 262 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 SHA1 3c024ca60a2b93ed0e0311f6b05ef5ef117bee31 SHA256 89af818a993faf14a4a87e2f254943420156c2a317c385480a9533ba682b650f MD5 5f35ae4b4cb1cd144db7c7c093d3fd80 metadata.xml 262 RMD160 4eabcbcb990d4d5e3b34db8c27bcd2c0cfcf7501 metadata.xml 262 @@ -13,3 +17,6 @@ SHA256 89af818a993faf14a4a87e2f254943420156c2a317c385480a9533ba682b650f metadata MD5 d41d8cd98f00b204e9800998ecf8427e files/digest-embassy-4.0.0 0 RMD160 9c1185a5c5e9fc54612808977ee8f548b2258d31 files/digest-embassy-4.0.0 0 SHA256 e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855 files/digest-embassy-4.0.0 0 +MD5 d41d8cd98f00b204e9800998ecf8427e files/digest-embassy-5.0.0 0 +RMD160 9c1185a5c5e9fc54612808977ee8f548b2258d31 files/digest-embassy-5.0.0 0 +SHA256 e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855 files/digest-embassy-5.0.0 0 |