Drop patch

1 files changed, 0 insertions, 84 deletions

diff --git a/sci-biology/amos/files/amos-2.0.7-gcc43.patch b/sci-biology/amos/files/amos-2.0.7-gcc43.patch
deleted file mode 100644
index e9cfcf92c1d2..000000000000
--- a/sci-biology/amos/files/amos-2.0.7-gcc43.patch
+++ /dev/null
@@ -1,84 +0,0 @@
---- src/Foundation/ConfigFile.cc.orig	2008-06-16 18:12:13.000000000 +0000
-+++ src/Foundation/ConfigFile.cc	2008-06-16 18:12:28.000000000 +0000
-@@ -35,6 +35,8 @@
- 
- #include "ConfigFile.hh"
- 
-+#include <cstring>
-+
- //! Constructor
- /*! Creates a ConfigFile class. Also loads, parses, and resolves
-  *  variable substitution.
-
---- src/Foundation/Logger.cc.orig	2008-06-16 18:13:45.000000000 +0000
-+++ src/Foundation/Logger.cc	2008-06-16 18:14:03.000000000 +0000
-@@ -58,6 +58,8 @@
-  */
- 
- #include "Logger.hh"
-+#include <cstdlib>
-+
- 
- //! Sets default values for class
- /*! Note: Log is disabled until a filter level is set\n
-
---- src/Foundation/OptionResult.cc.orig	2008-06-16 18:15:41.000000000 +0000
-+++ src/Foundation/OptionResult.cc	2008-06-16 18:15:51.000000000 +0000
-@@ -9,6 +9,8 @@
- //! @brief OptionResult class implementation
- 
- #include "OptionResult.hh"
-+#include <cstdlib>
-+
- 
- //! Sets defaults for all results
- OptionResult::OptionResult(const std::string & optionHelp)
-
---- src/Foundation/Options.cc.orig	2008-06-16 18:17:01.000000000 +0000
-+++ src/Foundation/Options.cc	2008-06-16 18:17:11.000000000 +0000
-@@ -26,6 +26,8 @@
-  */
- 
- #include "Options.hh"
-+#include <cstring>
-+
- 
- //! Constructor takes command line options in standard argc, argv format
- /*! Initializes application name, filespec, and invocation
-
---- src/Align/missing-reads.cc.orig	2008-06-16 18:22:21.000000000 +0000
-+++ src/Align/missing-reads.cc	2008-06-16 18:22:34.000000000 +0000
-@@ -9,6 +9,8 @@
- #include  <vector>
- #include  <algorithm>
- #include  <cassert>
-+#include  <cstring>
-+
- using namespace std;
- 
- const int  MAX_LINE = 1000;
-
---- src/Utils/runAmos.cc.orig	2008-06-16 18:30:30.000000000 +0000
-+++ src/Utils/runAmos.cc	2008-06-16 18:30:42.000000000 +0000
-@@ -18,6 +18,8 @@
- #include <dirent.h>
- #include <fcntl.h>
- #include <iostream>
-+#include <cstdlib>
-+
- 
- #define MAX_STRING 256         // length of various char*s in file
- 
-
---- src/bankViewer/HistogramWindow.cc.orig	2008-06-16 18:36:40.000000000 +0000
-+++ src/bankViewer/HistogramWindow.cc	2008-06-16 18:37:04.000000000 +0000
-@@ -1,6 +1,8 @@
- #include "HistogramWindow.hh"
- #include "HistogramWidget.hh"
- #include "InsertStats.hh"
-+#include <cstdlib>
-+
- 
- #include <qspinbox.h>
- #include <qcheckbox.h>
-