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author | Andrey Kislyuk <weaver@gentoo.org> | 2008-08-26 17:36:20 +0000 |
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committer | Andrey Kislyuk <weaver@gentoo.org> | 2008-08-26 17:36:20 +0000 |
commit | 59a6ef1af26b096541d17cb79c8d85a4610d0e47 (patch) | |
tree | d31df2f207f3e315f92aa3ffe6f7df5c3c43f790 /sci-biology | |
parent | Version bump (diff) | |
download | historical-59a6ef1af26b096541d17cb79c8d85a4610d0e47.tar.gz historical-59a6ef1af26b096541d17cb79c8d85a4610d0e47.tar.bz2 historical-59a6ef1af26b096541d17cb79c8d85a4610d0e47.zip |
Drop patch
Diffstat (limited to 'sci-biology')
-rw-r--r-- | sci-biology/amos/files/amos-2.0.7-gcc43.patch | 84 |
1 files changed, 0 insertions, 84 deletions
diff --git a/sci-biology/amos/files/amos-2.0.7-gcc43.patch b/sci-biology/amos/files/amos-2.0.7-gcc43.patch deleted file mode 100644 index e9cfcf92c1d2..000000000000 --- a/sci-biology/amos/files/amos-2.0.7-gcc43.patch +++ /dev/null @@ -1,84 +0,0 @@ ---- src/Foundation/ConfigFile.cc.orig 2008-06-16 18:12:13.000000000 +0000 -+++ src/Foundation/ConfigFile.cc 2008-06-16 18:12:28.000000000 +0000 -@@ -35,6 +35,8 @@ - - #include "ConfigFile.hh" - -+#include <cstring> -+ - //! Constructor - /*! Creates a ConfigFile class. Also loads, parses, and resolves - * variable substitution. - ---- src/Foundation/Logger.cc.orig 2008-06-16 18:13:45.000000000 +0000 -+++ src/Foundation/Logger.cc 2008-06-16 18:14:03.000000000 +0000 -@@ -58,6 +58,8 @@ - */ - - #include "Logger.hh" -+#include <cstdlib> -+ - - //! Sets default values for class - /*! Note: Log is disabled until a filter level is set\n - ---- src/Foundation/OptionResult.cc.orig 2008-06-16 18:15:41.000000000 +0000 -+++ src/Foundation/OptionResult.cc 2008-06-16 18:15:51.000000000 +0000 -@@ -9,6 +9,8 @@ - //! @brief OptionResult class implementation - - #include "OptionResult.hh" -+#include <cstdlib> -+ - - //! Sets defaults for all results - OptionResult::OptionResult(const std::string & optionHelp) - ---- src/Foundation/Options.cc.orig 2008-06-16 18:17:01.000000000 +0000 -+++ src/Foundation/Options.cc 2008-06-16 18:17:11.000000000 +0000 -@@ -26,6 +26,8 @@ - */ - - #include "Options.hh" -+#include <cstring> -+ - - //! Constructor takes command line options in standard argc, argv format - /*! Initializes application name, filespec, and invocation - ---- src/Align/missing-reads.cc.orig 2008-06-16 18:22:21.000000000 +0000 -+++ src/Align/missing-reads.cc 2008-06-16 18:22:34.000000000 +0000 -@@ -9,6 +9,8 @@ - #include <vector> - #include <algorithm> - #include <cassert> -+#include <cstring> -+ - using namespace std; - - const int MAX_LINE = 1000; - ---- src/Utils/runAmos.cc.orig 2008-06-16 18:30:30.000000000 +0000 -+++ src/Utils/runAmos.cc 2008-06-16 18:30:42.000000000 +0000 -@@ -18,6 +18,8 @@ - #include <dirent.h> - #include <fcntl.h> - #include <iostream> -+#include <cstdlib> -+ - - #define MAX_STRING 256 // length of various char*s in file - - ---- src/bankViewer/HistogramWindow.cc.orig 2008-06-16 18:36:40.000000000 +0000 -+++ src/bankViewer/HistogramWindow.cc 2008-06-16 18:37:04.000000000 +0000 -@@ -1,6 +1,8 @@ - #include "HistogramWindow.hh" - #include "HistogramWidget.hh" - #include "InsertStats.hh" -+#include <cstdlib> -+ - - #include <qspinbox.h> - #include <qcheckbox.h> - |