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authorJustin Lecher <jlec@gentoo.org>2010-03-07 09:19:05 +0000
committerJustin Lecher <jlec@gentoo.org>2010-03-07 09:19:05 +0000
commit092b9af093515f1445a25e86a26050cdd172e06d (patch)
treea5dc9de05a19eed34ea8cd09260a365c87367fe8 /sci-biology
parentKeyworded for prefix-linux, tested by me (diff)
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Moved to EAPI=3 for PREFIX support, keyworded for *-linux, tested by me
Package-Manager: portage-2.2_rc65/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/ncbi-tools++/ChangeLog6
-rw-r--r--sci-biology/ncbi-tools++/Manifest14
-rw-r--r--sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild22
3 files changed, 28 insertions, 14 deletions
diff --git a/sci-biology/ncbi-tools++/ChangeLog b/sci-biology/ncbi-tools++/ChangeLog
index 493d4040a980..6cd573fff28d 100644
--- a/sci-biology/ncbi-tools++/ChangeLog
+++ b/sci-biology/ncbi-tools++/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/ncbi-tools++
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.10 2010/02/26 16:07:02 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.11 2010/03/07 09:19:05 jlec Exp $
+
+ 07 Mar 2010; Justin Lecher (jlec) <jlec@gentoo.org>
+ ncbi-tools++-2009.05.15-r2.ebuild:
+ Moved to EAPI=3 for PREFIX support, keyworded for *-linux, tested by me
*ncbi-tools++-2009.05.15-r2 (26 Feb 2010)
diff --git a/sci-biology/ncbi-tools++/Manifest b/sci-biology/ncbi-tools++/Manifest
index 682663b0ca54..1d24040a605e 100644
--- a/sci-biology/ncbi-tools++/Manifest
+++ b/sci-biology/ncbi-tools++/Manifest
@@ -1,5 +1,15 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
AUX ncbi-tools++-2009.05.15-gcc44.patch 554 RMD160 57a23cbaad59b6011124f684db55f4ac2e4a43ab SHA1 7ed63addba554bf87a347d25ea2d4ea6b6552a1a SHA256 ddc2379ff636851e1bb4fb601930ee926c396819e06812b1ba76da001255d5c6
DIST ncbi_cxx--May_15_2009.tar.gz 13986626 RMD160 131a04d43056fd4d4fd1781d38a5c1b9e3089a13 SHA1 0cecad93774ce40b3455149b2c3538dfce032b85 SHA256 ccb86f2e33251580e23c94b8d2a4aa4832c278171ded29513f0c9859b303f1d8
-EBUILD ncbi-tools++-2009.05.15-r2.ebuild 2538 RMD160 20c19e891bd8cb95f31397b824c634dba69b3000 SHA1 49e4bf2474be89bb69a6b8d853fabeffe6955235 SHA256 68af78953d8db1bb3f1e0959d0465b1b6ec3632adea7bc736673a2d5eedfeeb2
-MISC ChangeLog 1970 RMD160 740c9a6ac86b7e72b88fe4dbe74bccd4ff617661 SHA1 f13bb19d94ba70cdf98f6fb365877786e5ab82a1 SHA256 eb64875fe205ff0471cf77b91fad32bcf9295e5088dac89742dec664dcf86d04
+EBUILD ncbi-tools++-2009.05.15-r2.ebuild 2623 RMD160 edf7c83b549e97c0fd33e9f27d95ec53ba0f5712 SHA1 3209b135cb6cc2e249b3e915eb750a45c4eec54b SHA256 fae656baaaeac39e25ed7ab5420e34ef1a4b7fd948ba7fa969abdeffdb0d416d
+MISC ChangeLog 2134 RMD160 f3171f61cfc2818c8a4499b050fdcdbced7a6804 SHA1 b3c79f632d36a37bed946d07f00a7388e47816cb SHA256 947d55e2da14d5ee61071ddcc3bcba930fd4dfdd6573af62f5e53a71851d4320
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.14 (GNU/Linux)
+
+iEYEARECAAYFAkuTb48ACgkQgAnW8HDreRZRcwCeLtGtKzBn7yqKELMPSehFTT0d
+ORkAoKdh6jnKY2am7M+xHCEZ1xetSW3r
+=QOsk
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild
index b8ae87fe88f4..61c7a3b5ede1 100644
--- a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild
+++ b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild
@@ -1,8 +1,8 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild,v 1.1 2010/02/26 16:07:02 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild,v 1.2 2010/03/07 09:19:05 jlec Exp $
-EAPI="2"
+EAPI="3"
inherit eutils multilib
@@ -18,7 +18,7 @@ LICENSE="public-domain"
SLOT="0"
#IUSE="X unicode opengl gnutls test"
IUSE="sqlite"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
# wxGTK: must run eselect wxwindows after installing wxgtk or build will fail. Check and abort here.
# dev-libs/xalan-c - problems detecting, api mismatch?
@@ -60,12 +60,12 @@ src_configure() {
--without-static \
--with-dll \
--without-ftds \
- --prefix="${D}"/usr \
- --libdir="${D}"/usr/$(get_libdir)/${PN} \
- --with-z="/usr" \
- --with-bz2="/usr" \
- --with-pcre="/usr" \
- --with-openssl="/usr" \
+ --prefix="${ED}"/usr \
+ --libdir="${ED}"/usr/$(get_libdir)/${PN} \
+ --with-z="${EPREFIX}/usr" \
+ --with-bz2="${EPREFIX}/usr" \
+ --with-pcre="${EPREFIX}/usr" \
+ --with-openssl="${EPREFIX}/usr" \
|| die
# --with-mt \ # fails with gcc-4.4 but not 4.3
@@ -89,9 +89,9 @@ src_compile() {
src_install() {
emake install || die
# File collisions with sci-biology/ncbi-tools
- rm -f "${D}"/usr/bin/{asn2asn,rpsblast,test_regexp}
+ rm -f "${ED}"/usr/bin/{asn2asn,rpsblast,test_regexp}
- echo "LD_LIBRARY_PATH=/usr/lib/${PN}" > ${S}/99${PN}
+ echo "LD_LIBRARY_PATH=${EPREFIX}/usr/$(get_libdir)/${PN}" > ${S}/99${PN}
doenvd "${S}/99${PN}"
}