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| author |   Olivier Fisette <ribosome@gentoo.org> | 2004-07-20 21:09:56 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2004-07-20 21:09:56 +0000 |
| commit | 0d2381ab680b2ce4ff36fc319bb1a3655e2c7e51 (patch) | |
| tree | 8ad93eea544597dcb97e5de7710c7ed0b00861b1 /app-sci/qrna | |
| parent | Updated version. Added support for parallel computing. (diff) | |
| download | historical-0d2381ab680b2ce4ff36fc319bb1a3655e2c7e51.tar.gz historical-0d2381ab680b2ce4ff36fc319bb1a3655e2c7e51.tar.bz2 historical-0d2381ab680b2ce4ff36fc319bb1a3655e2c7e51.zip | |
Initial import
Diffstat (limited to 'app-sci/qrna')
| -rw-r--r-- | app-sci/qrna/ChangeLog | 9 | ||||
| -rw-r--r-- | app-sci/qrna/Manifest | 5 | ||||
| -rw-r--r-- | app-sci/qrna/files/26qrna | 1 | ||||
| -rw-r--r-- | app-sci/qrna/files/digest-qrna-2.0.2c | 1 | ||||
| -rw-r--r-- | app-sci/qrna/metadata.xml | 9 | ||||
| -rw-r--r-- | app-sci/qrna/qrna-2.0.2c.ebuild | 40 |
6 files changed, 65 insertions, 0 deletions
diff --git a/app-sci/qrna/ChangeLog b/app-sci/qrna/ChangeLog new file mode 100644 index 000000000000..d2c6cb09ea79 --- /dev/null +++ b/app-sci/qrna/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for app-sci/qrna +# Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/qrna/ChangeLog,v 1.1 2004/07/20 21:09:56 ribosome Exp $ + +*qrna-2.0.2c (20 Jul 2004) + + 20 Jul 2004; Olivier Fisette <ribosome@gentoo.org> + qrna-2.0.2c.ebuild, metadata.xml, ChangeLog: + Initial import. diff --git a/app-sci/qrna/Manifest b/app-sci/qrna/Manifest new file mode 100644 index 000000000000..2b6f655d1a95 --- /dev/null +++ b/app-sci/qrna/Manifest @@ -0,0 +1,5 @@ +MD5 f2dea6873dd14b81d66ed47cbc9cab18 qrna-2.0.2c.ebuild 883 +MD5 794ed658496b3a46b2d34807c4c548c5 ChangeLog 345 +MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254 +MD5 9127b0a4628230fc3bf2e201ca7519a9 files/26qrna 30 +MD5 23a5277d2c657c4624bc93b197c51020 files/digest-qrna-2.0.2c 57 diff --git a/app-sci/qrna/files/26qrna b/app-sci/qrna/files/26qrna new file mode 100644 index 000000000000..53a90b90ed78 --- /dev/null +++ b/app-sci/qrna/files/26qrna @@ -0,0 +1 @@ +QRNADB="/usr/share/qrna/data" diff --git a/app-sci/qrna/files/digest-qrna-2.0.2c b/app-sci/qrna/files/digest-qrna-2.0.2c new file mode 100644 index 000000000000..7c2bd227c4a0 --- /dev/null +++ b/app-sci/qrna/files/digest-qrna-2.0.2c @@ -0,0 +1 @@ +MD5 910590603c4c0f1153930d3ad4d05a85 qrna.tar.Z 14045716 diff --git a/app-sci/qrna/metadata.xml b/app-sci/qrna/metadata.xml new file mode 100644 index 000000000000..e9391a41a838 --- /dev/null +++ b/app-sci/qrna/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>ribosome@gentoo.org</email> + <name>Olivier Fisette</name> + </maintainer> + <herd>sci</herd> +</pkgmetadata> diff --git a/app-sci/qrna/qrna-2.0.2c.ebuild b/app-sci/qrna/qrna-2.0.2c.ebuild new file mode 100644 index 000000000000..189c7dbde90d --- /dev/null +++ b/app-sci/qrna/qrna-2.0.2c.ebuild @@ -0,0 +1,40 @@ +# Copyright 1999-2004 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/qrna/qrna-2.0.2c.ebuild,v 1.1 2004/07/20 21:09:56 ribosome Exp $ + +DESCRIPTION="Prototype ncRNA genefinder" +HOMEPAGE="http://www.genetics.wustl.edu/eddy/software/" +SRC_URI="ftp://ftp.genetics.wustl.edu/pub/eddy/software/qrna.tar.Z" +LICENSE="GPL-2" + +SLOT="0" +KEYWORDS="~x86" +IUSE="perl" + +DEPEND="perl? ( dev-lang/perl ) + virtual/glibc" + +src_compile () { + cd ${S}/squid + emake || die + cd ${S}/src + emake || die +} + +src_install () { + dobin src/qrna + use perl && dobin scripts/* + + newdoc 00README README + insinto /usr/share/doc/${PF} + doins documentation/* + + insinto /usr/share/${PN}/data + doins lib/* + insinto /usr/share/${PN}/demos + doins Demos/* + + # Sets the path to the QRNA data files. + insinto /etc/env.d + doins ${FILESDIR}/26qrna +} |