Version bump (see bug #191864).

Package-Manager: portage-2.1.4

5 files changed, 64 insertions, 22 deletions

diff --git a/sci-biology/elph/ChangeLog b/sci-biology/elph/ChangeLog
index a03eec006967..364601497fe8 100644
--- a/sci-biology/elph/ChangeLog
+++ b/sci-biology/elph/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/elph
-# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/ChangeLog,v 1.10 2007/02/22 01:25:49 jokey Exp $
+# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/ChangeLog,v 1.11 2008/01/27 12:25:35 markusle Exp $
+
+*elph-1.0.1 (27 Jan 2008)
+
+  27 Jan 2008; Markus Dittrich <markusle@gentoo.org> +elph-1.0.1.ebuild:
+  Version bump (see bug #191864).
 
   22 Feb 2007; Markus Ullmann <jokey@gentoo.org> ChangeLog:
   Redigest for Manifest2
diff --git a/sci-biology/elph/Manifest b/sci-biology/elph/Manifest
index 17f0178c800c..66de2a762822 100644
--- a/sci-biology/elph/Manifest
+++ b/sci-biology/elph/Manifest
@@ -1,6 +1,3 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
 AUX elph-0.1.4-usage.patch 3909 RMD160 dd9e29881937b1be29c851270056ee455b1ec6e3 SHA1 42b64abe718ed2702513cd2c43083e1bfeb6d6b6 SHA256 89ed340310bb46f6d92d7f644b515e4b919dbf411a039a225e04387055b47482
 MD5 75fe098a9b1df66ed55f16b4cfde3922 files/elph-0.1.4-usage.patch 3909
 RMD160 dd9e29881937b1be29c851270056ee455b1ec6e3 files/elph-0.1.4-usage.patch 3909
@@ -10,14 +7,19 @@ MD5 fdc58c9dcd2752ace3fb6520676c8414 files/elph-0.1.5-usage.patch 3913
 RMD160 31964a1d76753d2167c5e206d34648088e974f34 files/elph-0.1.5-usage.patch 3913
 SHA256 78ee515e8a0ab04b279cb638c459fe1152b5f0015c9d5c9feea4f3d2a00d226a files/elph-0.1.5-usage.patch 3913
 DIST ELPH-0.1.5.tar.gz 153150 RMD160 7e60e2cf9a99cb435768cebbcd1506164e8a901c SHA1 1a3820c851ac0d021c9696ba1fd4eec819d82dbc SHA256 6ffa160f85cb2569bdf869cb0514dc624afcef4f2d8a36efbd1228d1a16cf361
-EBUILD elph-0.1.5.ebuild 1097 RMD160 d8f66d9a632a7ed9956725a8dc652eb81d3ac9b2 SHA1 da4ce2c28e4ad6866ad14dda00514679b4b98e3a SHA256 63ebe16b7a570eefd797e3c975abda63cf58e5c82af00f22c8896a119aa6b837
-MD5 3f29ac92714c7c9d82ef996aa81e9cfe elph-0.1.5.ebuild 1097
-RMD160 d8f66d9a632a7ed9956725a8dc652eb81d3ac9b2 elph-0.1.5.ebuild 1097
-SHA256 63ebe16b7a570eefd797e3c975abda63cf58e5c82af00f22c8896a119aa6b837 elph-0.1.5.ebuild 1097
-MISC ChangeLog 1760 RMD160 137e680f5359143a5a80e181df738a8f86b94a6b SHA1 9b8f22116cc334d0fc3913d602212e21c03f2ac9 SHA256 5cd2b70c6e199aa60adf85cdb565303ef4d4e5a60283036cb7a837185336244c
-MD5 76c9efb59a4919dcbb465c3c49a4393c ChangeLog 1760
-RMD160 137e680f5359143a5a80e181df738a8f86b94a6b ChangeLog 1760
-SHA256 5cd2b70c6e199aa60adf85cdb565303ef4d4e5a60283036cb7a837185336244c ChangeLog 1760
+DIST ELPH-1.0.1.tar.gz 113476 RMD160 854bc34aba30f1c7493536e1b2e36dd8143af7e7 SHA1 9c8bf6ac54ade29daa15dc07aeeb94747626298a SHA256 6d944401d2457d75815a34dbb5780f05df569eb1edfd00909b33c4c4c4ff40b9
+EBUILD elph-0.1.5.ebuild 1097 RMD160 a5794a06cb260e4768d2b7fe5fae9092b983556c SHA1 08600088dea012a4246f67cc5a1a7325e2ddf501 SHA256 d41af8ccd13ca55b1833101721d0eabf0a99a4d8ace913ac2f36341103c40b45
+MD5 a62a0335907aa027228a56c584b97c01 elph-0.1.5.ebuild 1097
+RMD160 a5794a06cb260e4768d2b7fe5fae9092b983556c elph-0.1.5.ebuild 1097
+SHA256 d41af8ccd13ca55b1833101721d0eabf0a99a4d8ace913ac2f36341103c40b45 elph-0.1.5.ebuild 1097
+EBUILD elph-1.0.1.ebuild 1055 RMD160 cf51c1f8bea3fcf962382f6923b27bcd0c4ed491 SHA1 e940e393d33fa4923d440d0c118de44e5e259d4a SHA256 602418e941a890dc5afa45ef5228745108ef5607169429b938c3347b84c0a56a
+MD5 db9a32ac49bd93b3bb319592590b4517 elph-1.0.1.ebuild 1055
+RMD160 cf51c1f8bea3fcf962382f6923b27bcd0c4ed491 elph-1.0.1.ebuild 1055
+SHA256 602418e941a890dc5afa45ef5228745108ef5607169429b938c3347b84c0a56a elph-1.0.1.ebuild 1055
+MISC ChangeLog 1898 RMD160 c04f7c712323e44929f99b93d64dd699107b45e1 SHA1 e9b2e3f35c7c375af370126b65c23506cbb990db SHA256 7fab7589e3d3c214efeaac40b9f9d52abc04da5f063f67523bed33c14ce48d04
+MD5 b832c63e71263263a20ee09f8f74a981 ChangeLog 1898
+RMD160 c04f7c712323e44929f99b93d64dd699107b45e1 ChangeLog 1898
+SHA256 7fab7589e3d3c214efeaac40b9f9d52abc04da5f063f67523bed33c14ce48d04 ChangeLog 1898
 MISC metadata.xml 521 RMD160 a76504e965c605b1482c130ff89a7a2699b40848 SHA1 a53e9edd330363da92d61317a9b6dff0764e7e69 SHA256 6258ca36980b98a20660267e910d4866d57ea6f499fc23f98a3cfd774db23e23
 MD5 6c406c6b044ef78b32d6eecfe0e07514 metadata.xml 521
 RMD160 a76504e965c605b1482c130ff89a7a2699b40848 metadata.xml 521
@@ -25,10 +27,6 @@ SHA256 6258ca36980b98a20660267e910d4866d57ea6f499fc23f98a3cfd774db23e23 metadata
 MD5 56354c1657421bcf7d27ae1deb5ad5f0 files/digest-elph-0.1.5 232
 RMD160 f8254204f481cb8f0a3ef8988ed040a407a8aa7e files/digest-elph-0.1.5 232
 SHA256 e0b26287eda0f69a1e54711b93870e87a4ddd21ae3c09959f7d24ce2ee95fdef files/digest-elph-0.1.5 232
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.1 (GNU/Linux)
-
-iD8DBQFF3PC1z974XjDVpbkRAm/DAJ9HFDpk01UA5TeaJnXFmg8T2hoIxgCfQmX1
-zjkIZ1RaNNhjJdtXvIYT45c=
-=RlwA
------END PGP SIGNATURE-----
+MD5 70edaf4d4bc4793697521c5707509fd8 files/digest-elph-1.0.1 232
+RMD160 7a6222bb12bd1611ffc944e3fdc1edb9519302fe files/digest-elph-1.0.1 232
+SHA256 36d5182c3fb2d6d866ac53de7cde7b39b5e48b25529c795741a7ed3b0f6f20fb files/digest-elph-1.0.1 232
diff --git a/sci-biology/elph/elph-0.1.5.ebuild b/sci-biology/elph/elph-0.1.5.ebuild
index 0d7d77b6a1d0..104105735b18 100644
--- a/sci-biology/elph/elph-0.1.5.ebuild
+++ b/sci-biology/elph/elph-0.1.5.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2005 Gentoo Foundation
+# Copyright 1999-2008 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/elph-0.1.5.ebuild,v 1.7 2005/10/18 01:05:39 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/elph-0.1.5.ebuild,v 1.8 2008/01/27 12:25:35 markusle Exp $
 
 inherit eutils toolchain-funcs
 
diff --git a/sci-biology/elph/elph-1.0.1.ebuild b/sci-biology/elph/elph-1.0.1.ebuild
new file mode 100644
index 000000000000..0457d2237e65
--- /dev/null
+++ b/sci-biology/elph/elph-1.0.1.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2008 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/elph/elph-1.0.1.ebuild,v 1.1 2008/01/27 12:25:35 markusle Exp $
+
+inherit eutils toolchain-funcs
+
+DESCRIPTION="Estimated Locations of Pattern Hits - Motif finder program"
+LICENSE="Artistic"
+HOMEPAGE="http://cbcb.umd.edu/software/ELPH/"
+SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-${PV}.tar.gz"
+
+SLOT="0"
+IUSE=""
+KEYWORDS="~x86 ~ppc-macos ~amd64"
+
+S="${WORKDIR}/ELPH/sources"
+
+src_unpack() {
+	unpack ${A}
+	cd "${S}"
+	sed -i -e "s/CC      := g++/CC      := $(tc-getCXX)/" \
+		-e "s/-D_REENTRANT -g/-D_REENTRANT ${CXXFLAGS}/" \
+		-e "s/LINKER    := g++/LINKER    := $(tc-getCXX)/" \
+		Makefile || die "Failed to patch Makefile."
+}
+
+src_compile() {
+	emake || die "Compilation failed."
+}
+
+src_install() {
+	dobin elph || "Failed to install program."
+	cd "${WORKDIR}"/ELPH
+	dodoc VERSION || die "Documentation installation failed."
+	newdoc Readme.ELPH README || die "Readme installation failed."
+}
diff --git a/sci-biology/elph/files/digest-elph-1.0.1 b/sci-biology/elph/files/digest-elph-1.0.1
new file mode 100644
index 000000000000..72292f6948a6
--- /dev/null
+++ b/sci-biology/elph/files/digest-elph-1.0.1
@@ -0,0 +1,3 @@
+MD5 eb96b4dde3ab12ba1f31a4230a829ff3 ELPH-1.0.1.tar.gz 113476
+RMD160 854bc34aba30f1c7493536e1b2e36dd8143af7e7 ELPH-1.0.1.tar.gz 113476
+SHA256 6d944401d2457d75815a34dbb5780f05df569eb1edfd00909b33c4c4c4ff40b9 ELPH-1.0.1.tar.gz 113476