diff options
| -rw-r--r-- | sci-biology/emboss/emboss-6.6.0-r1.ebuild | 17 |
1 files changed, 8 insertions, 9 deletions
diff --git a/sci-biology/emboss/emboss-6.6.0-r1.ebuild b/sci-biology/emboss/emboss-6.6.0-r1.ebuild index 2aa5aa9bc5c9..1c74ded5e22f 100644 --- a/sci-biology/emboss/emboss-6.6.0-r1.ebuild +++ b/sci-biology/emboss/emboss-6.6.0-r1.ebuild @@ -1,7 +1,7 @@ -# Copyright 1999-2017 Gentoo Foundation +# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=6 +EAPI=7 EBO_EAUTORECONF=1 @@ -9,10 +9,11 @@ inherit emboss-r2 readme.gentoo-r1 DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package" SRC_URI="ftp://emboss.open-bio.org/pub/${PN^^}/${P^^}.tar.gz" +S="${WORKDIR}/${P^^}" +LICENSE+=" Apache-2.0 GPL-3+ CC-BY-3.0" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="minimal" -LICENSE+=" Apache-2.0 GPL-3+ CC-BY-3.0" RDEPEND=" !games-action/xbomber @@ -27,8 +28,6 @@ PDEPEND=" sci-biology/rebase )" -S="${WORKDIR}/${P^^}" - PATCHES=( "${FILESDIR}"/${P}_fix-build-system.patch "${FILESDIR}"/${P}_FORTIFY_SOURCE-fix.patch @@ -42,20 +41,20 @@ src_install() { readme.gentoo_create_doc # Install env file for setting libplplot and acd files path. - cat > 22emboss <<- EOF || die + newenvd - 22emboss <<- EOF || die # ACD files location EMBOSS_ACDROOT="${EPREFIX}/usr/share/EMBOSS/acd" EMBOSS_DATA="${EPREFIX}/usr/share/EMBOSS/data" EOF - doenvd 22emboss # Remove useless dummy files - find "${ED%/}"/usr/share/EMBOSS -name dummyfile -delete || die "Failed to remove dummy files" + find "${ED}"/usr/share/EMBOSS -name dummyfile -delete \ + || die "Failed to remove dummy files" # Move the provided codon files to a different directory. This will avoid # user confusion and file collisions on case-insensitive file systems (see # bug #115446). This change is documented in "README.gentoo". - mv "${ED%/}"/usr/share/EMBOSS/data/CODONS{,.orig} \ + mv "${ED}"/usr/share/EMBOSS/data/CODONS{,.orig} \ || die "Failed to move CODON directory" } |