diff options
author | David Seifert <soap@gentoo.org> | 2019-12-29 09:53:12 +0100 |
---|---|---|
committer | David Seifert <soap@gentoo.org> | 2019-12-29 09:53:12 +0100 |
commit | 4b745c04e33c0393c2640637622046f78c2c5636 (patch) | |
tree | 4d258d06e772e379b93577f18cce651a415faf0d /sci-libs | |
parent | sci-libs/libsvm: Remove old (diff) | |
download | gentoo-4b745c04e33c0393c2640637622046f78c2c5636.tar.gz gentoo-4b745c04e33c0393c2640637622046f78c2c5636.tar.bz2 gentoo-4b745c04e33c0393c2640637622046f78c2c5636.zip |
sci-libs/scikits_learn: Remove old
Package-Manager: Portage-2.3.83, Repoman-2.3.20
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-libs')
-rw-r--r-- | sci-libs/scikits_learn/Manifest | 4 | ||||
-rw-r--r-- | sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch | 28 | ||||
-rw-r--r-- | sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch | 30 | ||||
-rw-r--r-- | sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild | 117 | ||||
-rw-r--r-- | sci-libs/scikits_learn/scikits_learn-0.17.ebuild | 117 | ||||
-rw-r--r-- | sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild | 120 | ||||
-rw-r--r-- | sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild | 124 | ||||
-rw-r--r-- | sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild | 120 | ||||
-rw-r--r-- | sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild | 107 |
9 files changed, 0 insertions, 767 deletions
diff --git a/sci-libs/scikits_learn/Manifest b/sci-libs/scikits_learn/Manifest index af427e21cc5f..cc6598f1275e 100644 --- a/sci-libs/scikits_learn/Manifest +++ b/sci-libs/scikits_learn/Manifest @@ -1,5 +1 @@ -DIST scikit-learn-0.17.1.tar.gz 7898571 BLAKE2B 4125864e8701e072e45f83be504a0eba8480f2c08584a6e98f2ae09dd4d64487931eca2ae116230b0d8945822d6e07cc2102129f48e789825c2b70102121fa06 SHA512 5786e04a13225d2433103f1873f2753e332704b98c4c32b840970f763ec1abf0248007089e5ae47e11c66535f05a0d0402715622e6d6f0955ec7961b92e1b2e5 -DIST scikit-learn-0.17.tar.gz 7834903 BLAKE2B 9492a0deff723bd1ff3a976f080a5db0d1bf590521a324d627b09bbb755dbdccc6e41fe71519e10bbad8d425b6b12ff6f44b0518d501d9d075dfa5d021be64dd SHA512 53a76e2f90e27967bf216cd9d7e8051ed847a3381e3b7b7b8236511b4105eef41bd4d3c9f7f71a51db4b0bf99cbd571d7c1b26803757cff04424b70cb834b555 -DIST scikit-learn-0.18.1.tar.gz 8933930 BLAKE2B 48cfc73769531242d1228f41115a78e4649c52e7d8796e54286f996ddab72353e3f73bf22302535b7d24f55194e893ed681c74dd60beab5f8ba09aa3af8e161a SHA512 7149e683424351a28c19501302ece147cb03d4d12b08822eb2b1898a4978b96803323778fbba628008dd7a7c85daea4e9b550a71ee76851f9a09b2baac18a799 -DIST scikit-learn-0.18.2.tar.gz 9224516 BLAKE2B fe4b402e3ac561f9272a0a51ddc17092f2a9fada3e2dc081be3fe66bb7932e0ca0c14d9be21272c364d13c4d9669e9ff399e16b53b5cbaa3f5b20e43d2bb448d SHA512 7c5c7bdd577ad215790654ce1eff6e802aebe53283ab6c5f12684cf99aeecc8976f9a9803f619f549d4d03be0d7634f249046e4b4f15afa12aecb2697e2e0b05 DIST scikit-learn-0.19.0.tar.gz 9341628 BLAKE2B c9e0c12558e81efb6f5cfddead028980b0019d2f6d0fdce5662c9138ec3a5b2a3d30b022a5713578bc7effd09894006e8f7f60a3e038ca66297502d9d4212686 SHA512 1b88bc043b08de9b5bb1f3814b8101c73ced010cf94bd725fb69e1ef95b4a9597a34de4a19f84fbbf63e54d47e95b3ff498d611234fcdfcaa5e4e3cf696289d2 diff --git a/sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch b/sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch deleted file mode 100644 index 96c6cc2dbde5..000000000000 --- a/sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch +++ /dev/null @@ -1,28 +0,0 @@ ---- sklearn/setup.py.orig 2013-08-08 13:54:08.310879167 -0700 -+++ sklearn/setup.py 2013-08-08 13:52:59.808456423 -0700 -@@ -68,14 +68,6 @@ - libraries=libraries, - ) - -- # some libs needs cblas, fortran-compiled BLAS will not be sufficient -- blas_info = get_info('blas_opt', 0) -- if (not blas_info) or ( -- ('NO_ATLAS_INFO', 1) in blas_info.get('define_macros', [])): -- config.add_library('cblas', -- sources=[join('src', 'cblas', '*.c')]) -- warnings.warn(BlasNotFoundError.__doc__) -- - # the following packages depend on cblas, so they have to be build - # after the above. - config.add_subpackage('linear_model') ---- sklearn/_build_utils.py.orig 2013-08-08 14:01:35.994589269 -0700 -+++ sklearn/_build_utils.py 2013-08-08 12:19:41.875967870 -0700 -@@ -23,7 +23,7 @@ - return False - - blas_info = get_info('blas_opt', 0) -- if (not blas_info) or atlas_not_found(blas_info): -+ if (not blas_info): - cblas_libs = ['cblas'] - blas_info.pop('libraries', None) - else: diff --git a/sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch b/sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch deleted file mode 100644 index 42657a7adacc..000000000000 --- a/sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch +++ /dev/null @@ -1,30 +0,0 @@ -diff -Nur scikit-learn-0.17.1.orig/sklearn/_build_utils.py scikit-learn-0.17.1/sklearn/_build_utils.py ---- scikit-learn-0.17.1.orig/sklearn/_build_utils.py 2016-03-09 00:27:54.756813784 +0000 -+++ scikit-learn-0.17.1/sklearn/_build_utils.py 2016-03-09 00:30:09.605118512 +0000 -@@ -23,7 +23,7 @@ - return False - - blas_info = get_info('blas_opt', 0) -- if (not blas_info) or atlas_not_found(blas_info): -+ if (not blas_info): - cblas_libs = ['cblas'] - blas_info.pop('libraries', None) - else: -diff -Nur scikit-learn-0.17.1.orig/sklearn/setup.py scikit-learn-0.17.1/sklearn/setup.py ---- scikit-learn-0.17.1.orig/sklearn/setup.py 2016-03-09 00:27:54.806813156 +0000 -+++ scikit-learn-0.17.1/sklearn/setup.py 2016-03-09 00:29:28.215638848 +0000 -@@ -58,14 +58,6 @@ - libraries=libraries, - ) - -- # some libs needs cblas, fortran-compiled BLAS will not be sufficient -- blas_info = get_info('blas_opt', 0) -- if (not blas_info) or ( -- ('NO_ATLAS_INFO', 1) in blas_info.get('define_macros', [])): -- config.add_library('cblas', -- sources=[join('src', 'cblas', '*.c')]) -- warnings.warn(BlasNotFoundError.__doc__) -- - # the following packages depend on cblas, so they have to be build - # after the above. - config.add_subpackage('linear_model') diff --git a/sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild b/sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild deleted file mode 100644 index e83910a436ba..000000000000 --- a/sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild +++ /dev/null @@ -1,117 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_5 ) - -inherit distutils-r1 flag-o-matic - -MYPN="${PN/scikits_/scikit-}" -MYP="${MYPN}-${PV}" - -DESCRIPTION="Python modules for machine learning and data mining" -HOMEPAGE="https://scikit-learn.org" -SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples test" -RESTRICT="!test? ( test )" - -RDEPEND=" - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/nose[${PYTHON_USEDEP}] - >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}] - sci-libs/scikits[${PYTHON_USEDEP}] - >=sci-libs/scipy-0.9[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - virtual/python-funcsigs[${PYTHON_USEDEP}] - " -DEPEND=" - dev-python/cython[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - doc? ( - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/sphinx[${PYTHON_USEDEP}] - )" - -S="${WORKDIR}/${MYP}" - -PATCHES=( "${FILESDIR}/${P}-system-cblas.patch" ) - -python_prepare_all() { - # bug #397605 - [[ ${CHOST} == *-darwin* ]] \ - && append-ldflags -bundle "-undefined dynamic_lookup" \ - || append-ldflags -shared - - # scikits-learn now uses the horrible numpy.distutils automagic - export SCIPY_FCONFIG="config_fc --noopt --noarch" - - # use system joblib - rm -r sklearn/externals/joblib/* || die - echo "from joblib import *" > sklearn/externals/joblib/__init__.py - sed -i -e '/joblib\/test/d' sklearn/externals/setup.py || die - sed -i -e 's/..externals.joblib/ joblib/g' \ - sklearn/cross_validation.py \ - sklearn/decomposition/tests/test_sparse_pca.py \ - sklearn/metrics/pairwise.py || die - - rm sklearn/externals/funcsigs.py || die - rm sklearn/externals/odict.py || die - sed -e 's:from ..externals.funcsigs import signature:from funcsigs import signature:g' \ - -i sklearn/utils/fixes.py || die - - distutils-r1_python_prepare_all -} - -python_compile() { - distutils-r1_python_compile ${SCIPY_FCONFIG} -} - -python_compile_all() { - if use doc; then - cd "${S}/doc" || die - local d="${BUILD_DIR}"/lib - ln -s "${S}"/sklearn/datasets/{data,descr,images} \ - "${d}"/sklearn/datasets || die - VARTEXFONTS="${T}"/fonts \ - MPLCONFIGDIR="${BUILD_DIR}" \ - PYTHONPATH="${d}" \ - emake html - rm -r "${d}"/sklearn/datasets/{data,descr,images} || die - fi -} - -python_test() { - # doc builds and runs tests - use doc && return - distutils_install_for_testing ${SCIPY_FCONFIG} - esetup.py \ - install --root="${T}/test-${EPYTHON}" \ - --no-compile ${SCIPY_FCONFIG} - pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null - nosetests -v sklearn --exe || die - popd > /dev/null -} - -python_install() { - distutils-r1_python_install ${SCIPY_FCONFIG} -} - -python_install_all() { - find "${S}" -name \*LICENSE.txt -delete - insinto /usr/share/doc/${PF} - use doc && doins -r doc/_build/html - use examples && doins -r examples - distutils-r1_python_install_all -} diff --git a/sci-libs/scikits_learn/scikits_learn-0.17.ebuild b/sci-libs/scikits_learn/scikits_learn-0.17.ebuild deleted file mode 100644 index e8b01caac0bd..000000000000 --- a/sci-libs/scikits_learn/scikits_learn-0.17.ebuild +++ /dev/null @@ -1,117 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit distutils-r1 eutils multilib flag-o-matic - -MYPN="${PN/scikits_/scikit-}" -MYP="${MYPN}-${PV}" - -DESCRIPTION="Python modules for machine learning and data mining" -HOMEPAGE="https://scikit-learn.org" -SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples test" -RESTRICT="!test? ( test )" - -RDEPEND=" - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/nose[${PYTHON_USEDEP}] - >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}] - sci-libs/scikits[${PYTHON_USEDEP}] - >=sci-libs/scipy-0.9[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - virtual/python-funcsigs[${PYTHON_USEDEP}] - " -DEPEND=" - dev-python/cython[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - doc? ( - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/sphinx[${PYTHON_USEDEP}] - )" - -S="${WORKDIR}/${MYP}" - -python_prepare_all() { - # bug #397605 - [[ ${CHOST} == *-darwin* ]] \ - && append-ldflags -bundle "-undefined dynamic_lookup" \ - || append-ldflags -shared - - # scikits-learn now uses the horrible numpy.distutils automagic - export SCIPY_FCONFIG="config_fc --noopt --noarch" - - # use system joblib - rm -r sklearn/externals/joblib/* || die - echo "from joblib import *" > sklearn/externals/joblib/__init__.py - sed -i -e '/joblib\/test/d' sklearn/externals/setup.py || die - sed -i -e 's/..externals.joblib/joblib/g' \ - sklearn/decomposition/tests/test_sparse_pca.py \ - sklearn/metrics/pairwise.py || die - - rm sklearn/externals/funcsigs.py || die - rm sklearn/externals/odict.py || die - sed \ - -e 's:from ..externals.funcsigs import signature:from funcsigs import signature:g' \ - -i sklearn/utils/fixes.py || die - - # use gentoo cblas infrastructure - epatch "${FILESDIR}"/${PN}-0.14.1-system-cblas.patch - - distutils-r1_python_prepare_all -} - -python_compile() { - distutils-r1_python_compile ${SCIPY_FCONFIG} -} - -python_compile_all() { - if use doc; then - cd "${S}/doc" || die - local d="${BUILD_DIR}"/lib - ln -s "${S}"/sklearn/datasets/{data,descr,images} \ - "${d}"/sklearn/datasets || die - VARTEXFONTS="${T}"/fonts \ - MPLCONFIGDIR="${BUILD_DIR}" \ - PYTHONPATH="${d}" \ - emake html - rm -r "${d}"/sklearn/datasets/{data,descr,images} || die - fi -} - -python_test() { - # doc builds and runs tests - use doc && return - distutils_install_for_testing ${SCIPY_FCONFIG} - esetup.py \ - install --root="${T}/test-${EPYTHON}" \ - --no-compile ${SCIPY_FCONFIG} - pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null - nosetests -v sklearn --exe || die - popd > /dev/null -} - -python_install() { - distutils-r1_python_install ${SCIPY_FCONFIG} -} - -python_install_all() { - find "${S}" -name \*LICENSE.txt -delete - use doc && HTML_DOCS=( doc/_build/html/. ) - use examples && EXAMPLES=( examples/. ) - distutils-r1_python_install_all -} diff --git a/sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild b/sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild deleted file mode 100644 index 1a04525ec154..000000000000 --- a/sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild +++ /dev/null @@ -1,120 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_5 ) - -inherit distutils-r1 flag-o-matic - -MYPN="${PN/scikits_/scikit-}" -MYP="${MYPN}-${PV}" - -DESCRIPTION="Python modules for machine learning and data mining" -HOMEPAGE="https://scikit-learn.org" -SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples test" -RESTRICT="!test? ( test )" - -RDEPEND=" - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/nose[${PYTHON_USEDEP}] - >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}] - sci-libs/scikits[${PYTHON_USEDEP}] - >=sci-libs/scipy-0.9[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - virtual/python-funcsigs[${PYTHON_USEDEP}] - " -DEPEND=" - dev-python/cython[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - doc? ( - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/sphinx[${PYTHON_USEDEP}] - )" - -S="${WORKDIR}/${MYP}" - -PATCHES=( "${FILESDIR}/${P}-system-cblas.patch" ) - -python_prepare_all() { - # bug #397605 - [[ ${CHOST} == *-darwin* ]] \ - && append-ldflags -bundle "-undefined dynamic_lookup" \ - || append-ldflags -shared - - # scikits-learn now uses the horrible numpy.distutils automagic - export SCIPY_FCONFIG="config_fc --noopt --noarch" - - # remove bundled cblas - rm -r sklearn/src || die - - # use system joblib - rm -r sklearn/externals/joblib || die - sed -i -e '/joblib/d' sklearn/externals/setup.py || die - for f in sklearn/{*/,}*.py; do - sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \ - -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die - done - - rm sklearn/externals/funcsigs.py || die - rm sklearn/externals/odict.py || die - for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do - sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die - done - - distutils-r1_python_prepare_all -} - -python_compile() { - distutils-r1_python_compile ${SCIPY_FCONFIG} -} - -python_compile_all() { - if use doc; then - cd "${S}/doc" || die - local d="${BUILD_DIR}"/lib - ln -s "${S}"/sklearn/datasets/{data,descr,images} \ - "${d}"/sklearn/datasets || die - VARTEXFONTS="${T}"/fonts \ - MPLCONFIGDIR="${BUILD_DIR}" \ - PYTHONPATH="${d}" \ - emake html - rm -r "${d}"/sklearn/datasets/{data,descr,images} || die - fi -} - -python_test() { - # doc builds and runs tests - use doc && return - distutils_install_for_testing ${SCIPY_FCONFIG} - esetup.py \ - install --root="${T}/test-${EPYTHON}" \ - --no-compile ${SCIPY_FCONFIG} - pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null - nosetests -v sklearn --exe || die - popd > /dev/null -} - -python_install() { - distutils-r1_python_install ${SCIPY_FCONFIG} -} - -python_install_all() { - find "${S}" -name \*LICENSE.txt -delete - insinto /usr/share/doc/${PF} - use doc && doins -r doc/_build/html - use examples && doins -r examples - distutils-r1_python_install_all -} diff --git a/sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild b/sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild deleted file mode 100644 index 854f19af4e33..000000000000 --- a/sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild +++ /dev/null @@ -1,124 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_{5,6} ) - -inherit distutils-r1 flag-o-matic - -MYPN="${PN/scikits_/scikit-}" -MYP="${MYPN}-${PV}" - -DESCRIPTION="Python modules for machine learning and data mining" -HOMEPAGE="https://scikit-learn.org" -SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples test" -RESTRICT="!test? ( test )" - -# tried to unbundle virtual/python-funcsigs, funcsigs, odict -# but it is a large mess to maintain - -RDEPEND=" - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/nose[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - sci-libs/scikits[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas:= - virtual/cblas:= -" - -DEPEND=" - dev-python/cython[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas:= - virtual/cblas:= - doc? ( - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/sphinx[${PYTHON_USEDEP}] - ) -" - -S="${WORKDIR}/${MYP}" - -PATCHES=( "${FILESDIR}/${PN}-0.18.1-system-cblas.patch" ) - -python_prepare_all() { - # bug #397605 - [[ ${CHOST} == *-darwin* ]] \ - && append-ldflags -bundle "-undefined dynamic_lookup" \ - || append-ldflags -shared - - # scikits-learn now uses the horrible numpy.distutils automagic - export SCIPY_FCONFIG="config_fc --noopt --noarch" - - # remove bundled cblas - rm -r sklearn/src || die - - # commented out, since it is a mess to maintain - # use system joblib - #rm -r sklearn/externals/joblib || die - #sed -i -e '/joblib/d' sklearn/externals/setup.py || die - #for f in sklearn/{*/,}*.py; do - # sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \ - # -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die - #done - - # use system funcsigs and odict - #rm sklearn/externals/funcsigs.py || die - #rm sklearn/externals/odict.py || die - #for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do - # sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die - #done - distutils-r1_python_prepare_all -} - -python_compile() { - distutils-r1_python_compile ${SCIPY_FCONFIG} -} - -python_compile_all() { - if use doc; then - cd "${S}/doc" || die - local d="${BUILD_DIR}/lib" - ln -s \ - "${S}"/sklearn/datasets/{data,descr,images} \ - "${d}"/sklearn/datasets || die - VARTEXFONTS="${T}"/fonts \ - MPLCONFIGDIR="${BUILD_DIR}" \ - PYTHONPATH="${d}" \ - emake html - rm -r "${d}"/sklearn/datasets/{data,descr,images} || die - fi -} - -python_test() { - # doc builds and runs tests - use doc && return - distutils_install_for_testing ${SCIPY_FCONFIG} - esetup.py install \ - --root="${T}/test-${EPYTHON}" \ - --no-compile ${SCIPY_FCONFIG} - pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null - JOBLIB_MULTIPROCESSING=2 SKLEARN_SKIP_NETWORK_TESTS=1 nosetests -v sklearn --exe || die - popd > /dev/null -} - -python_install() { - distutils-r1_python_install ${SCIPY_FCONFIG} -} - -python_install_all() { - find "${S}" -name \*LICENSE.txt -delete - insinto /usr/share/doc/${PF} - use doc && doins -r doc/_build/html - use examples && doins -r examples - distutils-r1_python_install_all -} diff --git a/sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild b/sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild deleted file mode 100644 index 191789ac6c0f..000000000000 --- a/sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild +++ /dev/null @@ -1,120 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_{5,6} ) - -inherit distutils-r1 flag-o-matic - -MYPN="${PN/scikits_/scikit-}" -MYP="${MYPN}-${PV}" - -DESCRIPTION="Python modules for machine learning and data mining" -HOMEPAGE="https://scikit-learn.org" -SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples test" -RESTRICT="!test? ( test )" - -RDEPEND=" - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/nose[${PYTHON_USEDEP}] - >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}] - sci-libs/scikits[${PYTHON_USEDEP}] - >=sci-libs/scipy-0.9[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - virtual/python-funcsigs[${PYTHON_USEDEP}] - " -DEPEND=" - dev-python/cython[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas - virtual/cblas - doc? ( - dev-python/joblib[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/sphinx[${PYTHON_USEDEP}] - )" - -S="${WORKDIR}/${MYP}" - -PATCHES=( "${FILESDIR}/${PN}-0.18.1-system-cblas.patch" ) - -python_prepare_all() { - # bug #397605 - [[ ${CHOST} == *-darwin* ]] \ - && append-ldflags -bundle "-undefined dynamic_lookup" \ - || append-ldflags -shared - - # scikits-learn now uses the horrible numpy.distutils automagic - export SCIPY_FCONFIG="config_fc --noopt --noarch" - - # remove bundled cblas - rm -r sklearn/src || die - - # use system joblib - rm -r sklearn/externals/joblib || die - sed -i -e '/joblib/d' sklearn/externals/setup.py || die - for f in sklearn/{*/,}*.py; do - sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \ - -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die - done - - rm sklearn/externals/funcsigs.py || die - rm sklearn/externals/odict.py || die - for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do - sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die - done - - distutils-r1_python_prepare_all -} - -python_compile() { - distutils-r1_python_compile ${SCIPY_FCONFIG} -} - -python_compile_all() { - if use doc; then - cd "${S}/doc" || die - local d="${BUILD_DIR}"/lib - ln -s "${S}"/sklearn/datasets/{data,descr,images} \ - "${d}"/sklearn/datasets || die - VARTEXFONTS="${T}"/fonts \ - MPLCONFIGDIR="${BUILD_DIR}" \ - PYTHONPATH="${d}" \ - emake html - rm -r "${d}"/sklearn/datasets/{data,descr,images} || die - fi -} - -python_test() { - # doc builds and runs tests - use doc && return - distutils_install_for_testing ${SCIPY_FCONFIG} - esetup.py \ - install --root="${T}/test-${EPYTHON}" \ - --no-compile ${SCIPY_FCONFIG} - pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null - nosetests -v sklearn --exe || die - popd > /dev/null -} - -python_install() { - distutils-r1_python_install ${SCIPY_FCONFIG} -} - -python_install_all() { - find "${S}" -name \*LICENSE.txt -delete - insinto /usr/share/doc/${PF} - use doc && doins -r doc/_build/html - use examples && doins -r examples - distutils-r1_python_install_all -} diff --git a/sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild b/sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild deleted file mode 100644 index f6a48d144c7c..000000000000 --- a/sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild +++ /dev/null @@ -1,107 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_{5,6} ) - -inherit distutils-r1 flag-o-matic - -MYPN="${PN/scikits_/scikit-}" -MYP="${MYPN}-${PV}" - -DESCRIPTION="Python modules for machine learning and data mining" -HOMEPAGE="https://scikit-learn.org" -SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples test" -RESTRICT="!test? ( test )" - -# tried to unbundle virtual/python-funcsigs, funcsigs, odict -# but it is a large mess to maintain - -RDEPEND=" - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/nose[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - sci-libs/scikits[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas:= - virtual/cblas:= -" - -DEPEND=" - dev-python/cython[${PYTHON_USEDEP}] - dev-python/numpy[lapack,${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - virtual/blas:= - virtual/cblas:= -" - -S="${WORKDIR}/${MYP}" - -PATCHES=( "${FILESDIR}"/${PN}-0.18.1-system-cblas.patch ) - -python_prepare_all() { - # bug #397605 - [[ ${CHOST} == *-darwin* ]] \ - && append-ldflags -bundle "-undefined dynamic_lookup" \ - || append-ldflags -shared - - # scikits-learn now uses the horrible numpy.distutils automagic - export SCIPY_FCONFIG="config_fc --noopt --noarch" - - # remove bundled cblas - rm -r sklearn/src || die - - # commented out, since it is a mess to maintain - # use system joblib - #rm -r sklearn/externals/joblib || die - #sed -i -e '/joblib/d' sklearn/externals/setup.py || die - #for f in sklearn/{*/,}*.py; do - # sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \ - # -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die - #done - - # use system funcsigs and odict - #rm sklearn/externals/funcsigs.py || die - #rm sklearn/externals/odict.py || die - #for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do - # sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die - #done - distutils-r1_python_prepare_all -} - -python_compile() { - distutils-r1_python_compile ${SCIPY_FCONFIG} -} - -python_test() { - # doc builds and runs tests - use doc && return - distutils_install_for_testing ${SCIPY_FCONFIG} - esetup.py install \ - --root="${T}/test-${EPYTHON}" \ - --no-compile ${SCIPY_FCONFIG} - pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null - JOBLIB_MULTIPROCESSING=2 SKLEARN_SKIP_NETWORK_TESTS=1 nosetests -v sklearn --exe || die - popd > /dev/null -} - -python_install() { - distutils-r1_python_install ${SCIPY_FCONFIG} -} - -python_install_all() { - find "${S}" -name \*LICENSE.txt -delete - distutils-r1_python_install_all - if use examples; then - dodoc -r examples - docompress -x /usr/share/doc/${PF}/examples - fi - -} |