summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorDavid Seifert <soap@gentoo.org>2019-12-29 09:53:12 +0100
committerDavid Seifert <soap@gentoo.org>2019-12-29 09:53:12 +0100
commit4b745c04e33c0393c2640637622046f78c2c5636 (patch)
tree4d258d06e772e379b93577f18cce651a415faf0d /sci-libs
parentsci-libs/libsvm: Remove old (diff)
downloadgentoo-4b745c04e33c0393c2640637622046f78c2c5636.tar.gz
gentoo-4b745c04e33c0393c2640637622046f78c2c5636.tar.bz2
gentoo-4b745c04e33c0393c2640637622046f78c2c5636.zip
sci-libs/scikits_learn: Remove old
Package-Manager: Portage-2.3.83, Repoman-2.3.20 Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-libs')
-rw-r--r--sci-libs/scikits_learn/Manifest4
-rw-r--r--sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch28
-rw-r--r--sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch30
-rw-r--r--sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild117
-rw-r--r--sci-libs/scikits_learn/scikits_learn-0.17.ebuild117
-rw-r--r--sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild120
-rw-r--r--sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild124
-rw-r--r--sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild120
-rw-r--r--sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild107
9 files changed, 0 insertions, 767 deletions
diff --git a/sci-libs/scikits_learn/Manifest b/sci-libs/scikits_learn/Manifest
index af427e21cc5f..cc6598f1275e 100644
--- a/sci-libs/scikits_learn/Manifest
+++ b/sci-libs/scikits_learn/Manifest
@@ -1,5 +1 @@
-DIST scikit-learn-0.17.1.tar.gz 7898571 BLAKE2B 4125864e8701e072e45f83be504a0eba8480f2c08584a6e98f2ae09dd4d64487931eca2ae116230b0d8945822d6e07cc2102129f48e789825c2b70102121fa06 SHA512 5786e04a13225d2433103f1873f2753e332704b98c4c32b840970f763ec1abf0248007089e5ae47e11c66535f05a0d0402715622e6d6f0955ec7961b92e1b2e5
-DIST scikit-learn-0.17.tar.gz 7834903 BLAKE2B 9492a0deff723bd1ff3a976f080a5db0d1bf590521a324d627b09bbb755dbdccc6e41fe71519e10bbad8d425b6b12ff6f44b0518d501d9d075dfa5d021be64dd SHA512 53a76e2f90e27967bf216cd9d7e8051ed847a3381e3b7b7b8236511b4105eef41bd4d3c9f7f71a51db4b0bf99cbd571d7c1b26803757cff04424b70cb834b555
-DIST scikit-learn-0.18.1.tar.gz 8933930 BLAKE2B 48cfc73769531242d1228f41115a78e4649c52e7d8796e54286f996ddab72353e3f73bf22302535b7d24f55194e893ed681c74dd60beab5f8ba09aa3af8e161a SHA512 7149e683424351a28c19501302ece147cb03d4d12b08822eb2b1898a4978b96803323778fbba628008dd7a7c85daea4e9b550a71ee76851f9a09b2baac18a799
-DIST scikit-learn-0.18.2.tar.gz 9224516 BLAKE2B fe4b402e3ac561f9272a0a51ddc17092f2a9fada3e2dc081be3fe66bb7932e0ca0c14d9be21272c364d13c4d9669e9ff399e16b53b5cbaa3f5b20e43d2bb448d SHA512 7c5c7bdd577ad215790654ce1eff6e802aebe53283ab6c5f12684cf99aeecc8976f9a9803f619f549d4d03be0d7634f249046e4b4f15afa12aecb2697e2e0b05
DIST scikit-learn-0.19.0.tar.gz 9341628 BLAKE2B c9e0c12558e81efb6f5cfddead028980b0019d2f6d0fdce5662c9138ec3a5b2a3d30b022a5713578bc7effd09894006e8f7f60a3e038ca66297502d9d4212686 SHA512 1b88bc043b08de9b5bb1f3814b8101c73ced010cf94bd725fb69e1ef95b4a9597a34de4a19f84fbbf63e54d47e95b3ff498d611234fcdfcaa5e4e3cf696289d2
diff --git a/sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch b/sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch
deleted file mode 100644
index 96c6cc2dbde5..000000000000
--- a/sci-libs/scikits_learn/files/scikits_learn-0.14.1-system-cblas.patch
+++ /dev/null
@@ -1,28 +0,0 @@
---- sklearn/setup.py.orig 2013-08-08 13:54:08.310879167 -0700
-+++ sklearn/setup.py 2013-08-08 13:52:59.808456423 -0700
-@@ -68,14 +68,6 @@
- libraries=libraries,
- )
-
-- # some libs needs cblas, fortran-compiled BLAS will not be sufficient
-- blas_info = get_info('blas_opt', 0)
-- if (not blas_info) or (
-- ('NO_ATLAS_INFO', 1) in blas_info.get('define_macros', [])):
-- config.add_library('cblas',
-- sources=[join('src', 'cblas', '*.c')])
-- warnings.warn(BlasNotFoundError.__doc__)
--
- # the following packages depend on cblas, so they have to be build
- # after the above.
- config.add_subpackage('linear_model')
---- sklearn/_build_utils.py.orig 2013-08-08 14:01:35.994589269 -0700
-+++ sklearn/_build_utils.py 2013-08-08 12:19:41.875967870 -0700
-@@ -23,7 +23,7 @@
- return False
-
- blas_info = get_info('blas_opt', 0)
-- if (not blas_info) or atlas_not_found(blas_info):
-+ if (not blas_info):
- cblas_libs = ['cblas']
- blas_info.pop('libraries', None)
- else:
diff --git a/sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch b/sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch
deleted file mode 100644
index 42657a7adacc..000000000000
--- a/sci-libs/scikits_learn/files/scikits_learn-0.17.1-system-cblas.patch
+++ /dev/null
@@ -1,30 +0,0 @@
-diff -Nur scikit-learn-0.17.1.orig/sklearn/_build_utils.py scikit-learn-0.17.1/sklearn/_build_utils.py
---- scikit-learn-0.17.1.orig/sklearn/_build_utils.py 2016-03-09 00:27:54.756813784 +0000
-+++ scikit-learn-0.17.1/sklearn/_build_utils.py 2016-03-09 00:30:09.605118512 +0000
-@@ -23,7 +23,7 @@
- return False
-
- blas_info = get_info('blas_opt', 0)
-- if (not blas_info) or atlas_not_found(blas_info):
-+ if (not blas_info):
- cblas_libs = ['cblas']
- blas_info.pop('libraries', None)
- else:
-diff -Nur scikit-learn-0.17.1.orig/sklearn/setup.py scikit-learn-0.17.1/sklearn/setup.py
---- scikit-learn-0.17.1.orig/sklearn/setup.py 2016-03-09 00:27:54.806813156 +0000
-+++ scikit-learn-0.17.1/sklearn/setup.py 2016-03-09 00:29:28.215638848 +0000
-@@ -58,14 +58,6 @@
- libraries=libraries,
- )
-
-- # some libs needs cblas, fortran-compiled BLAS will not be sufficient
-- blas_info = get_info('blas_opt', 0)
-- if (not blas_info) or (
-- ('NO_ATLAS_INFO', 1) in blas_info.get('define_macros', [])):
-- config.add_library('cblas',
-- sources=[join('src', 'cblas', '*.c')])
-- warnings.warn(BlasNotFoundError.__doc__)
--
- # the following packages depend on cblas, so they have to be build
- # after the above.
- config.add_subpackage('linear_model')
diff --git a/sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild b/sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild
deleted file mode 100644
index e83910a436ba..000000000000
--- a/sci-libs/scikits_learn/scikits_learn-0.17.1.ebuild
+++ /dev/null
@@ -1,117 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 python3_5 )
-
-inherit distutils-r1 flag-o-matic
-
-MYPN="${PN/scikits_/scikit-}"
-MYP="${MYPN}-${PV}"
-
-DESCRIPTION="Python modules for machine learning and data mining"
-HOMEPAGE="https://scikit-learn.org"
-SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/nose[${PYTHON_USEDEP}]
- >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}]
- sci-libs/scikits[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- virtual/python-funcsigs[${PYTHON_USEDEP}]
- "
-DEPEND="
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- dev-python/setuptools[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- doc? (
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/sphinx[${PYTHON_USEDEP}]
- )"
-
-S="${WORKDIR}/${MYP}"
-
-PATCHES=( "${FILESDIR}/${P}-system-cblas.patch" )
-
-python_prepare_all() {
- # bug #397605
- [[ ${CHOST} == *-darwin* ]] \
- && append-ldflags -bundle "-undefined dynamic_lookup" \
- || append-ldflags -shared
-
- # scikits-learn now uses the horrible numpy.distutils automagic
- export SCIPY_FCONFIG="config_fc --noopt --noarch"
-
- # use system joblib
- rm -r sklearn/externals/joblib/* || die
- echo "from joblib import *" > sklearn/externals/joblib/__init__.py
- sed -i -e '/joblib\/test/d' sklearn/externals/setup.py || die
- sed -i -e 's/..externals.joblib/ joblib/g' \
- sklearn/cross_validation.py \
- sklearn/decomposition/tests/test_sparse_pca.py \
- sklearn/metrics/pairwise.py || die
-
- rm sklearn/externals/funcsigs.py || die
- rm sklearn/externals/odict.py || die
- sed -e 's:from ..externals.funcsigs import signature:from funcsigs import signature:g' \
- -i sklearn/utils/fixes.py || die
-
- distutils-r1_python_prepare_all
-}
-
-python_compile() {
- distutils-r1_python_compile ${SCIPY_FCONFIG}
-}
-
-python_compile_all() {
- if use doc; then
- cd "${S}/doc" || die
- local d="${BUILD_DIR}"/lib
- ln -s "${S}"/sklearn/datasets/{data,descr,images} \
- "${d}"/sklearn/datasets || die
- VARTEXFONTS="${T}"/fonts \
- MPLCONFIGDIR="${BUILD_DIR}" \
- PYTHONPATH="${d}" \
- emake html
- rm -r "${d}"/sklearn/datasets/{data,descr,images} || die
- fi
-}
-
-python_test() {
- # doc builds and runs tests
- use doc && return
- distutils_install_for_testing ${SCIPY_FCONFIG}
- esetup.py \
- install --root="${T}/test-${EPYTHON}" \
- --no-compile ${SCIPY_FCONFIG}
- pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null
- nosetests -v sklearn --exe || die
- popd > /dev/null
-}
-
-python_install() {
- distutils-r1_python_install ${SCIPY_FCONFIG}
-}
-
-python_install_all() {
- find "${S}" -name \*LICENSE.txt -delete
- insinto /usr/share/doc/${PF}
- use doc && doins -r doc/_build/html
- use examples && doins -r examples
- distutils-r1_python_install_all
-}
diff --git a/sci-libs/scikits_learn/scikits_learn-0.17.ebuild b/sci-libs/scikits_learn/scikits_learn-0.17.ebuild
deleted file mode 100644
index e8b01caac0bd..000000000000
--- a/sci-libs/scikits_learn/scikits_learn-0.17.ebuild
+++ /dev/null
@@ -1,117 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 eutils multilib flag-o-matic
-
-MYPN="${PN/scikits_/scikit-}"
-MYP="${MYPN}-${PV}"
-
-DESCRIPTION="Python modules for machine learning and data mining"
-HOMEPAGE="https://scikit-learn.org"
-SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/nose[${PYTHON_USEDEP}]
- >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}]
- sci-libs/scikits[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- virtual/python-funcsigs[${PYTHON_USEDEP}]
- "
-DEPEND="
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- dev-python/setuptools[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- doc? (
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/sphinx[${PYTHON_USEDEP}]
- )"
-
-S="${WORKDIR}/${MYP}"
-
-python_prepare_all() {
- # bug #397605
- [[ ${CHOST} == *-darwin* ]] \
- && append-ldflags -bundle "-undefined dynamic_lookup" \
- || append-ldflags -shared
-
- # scikits-learn now uses the horrible numpy.distutils automagic
- export SCIPY_FCONFIG="config_fc --noopt --noarch"
-
- # use system joblib
- rm -r sklearn/externals/joblib/* || die
- echo "from joblib import *" > sklearn/externals/joblib/__init__.py
- sed -i -e '/joblib\/test/d' sklearn/externals/setup.py || die
- sed -i -e 's/..externals.joblib/joblib/g' \
- sklearn/decomposition/tests/test_sparse_pca.py \
- sklearn/metrics/pairwise.py || die
-
- rm sklearn/externals/funcsigs.py || die
- rm sklearn/externals/odict.py || die
- sed \
- -e 's:from ..externals.funcsigs import signature:from funcsigs import signature:g' \
- -i sklearn/utils/fixes.py || die
-
- # use gentoo cblas infrastructure
- epatch "${FILESDIR}"/${PN}-0.14.1-system-cblas.patch
-
- distutils-r1_python_prepare_all
-}
-
-python_compile() {
- distutils-r1_python_compile ${SCIPY_FCONFIG}
-}
-
-python_compile_all() {
- if use doc; then
- cd "${S}/doc" || die
- local d="${BUILD_DIR}"/lib
- ln -s "${S}"/sklearn/datasets/{data,descr,images} \
- "${d}"/sklearn/datasets || die
- VARTEXFONTS="${T}"/fonts \
- MPLCONFIGDIR="${BUILD_DIR}" \
- PYTHONPATH="${d}" \
- emake html
- rm -r "${d}"/sklearn/datasets/{data,descr,images} || die
- fi
-}
-
-python_test() {
- # doc builds and runs tests
- use doc && return
- distutils_install_for_testing ${SCIPY_FCONFIG}
- esetup.py \
- install --root="${T}/test-${EPYTHON}" \
- --no-compile ${SCIPY_FCONFIG}
- pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null
- nosetests -v sklearn --exe || die
- popd > /dev/null
-}
-
-python_install() {
- distutils-r1_python_install ${SCIPY_FCONFIG}
-}
-
-python_install_all() {
- find "${S}" -name \*LICENSE.txt -delete
- use doc && HTML_DOCS=( doc/_build/html/. )
- use examples && EXAMPLES=( examples/. )
- distutils-r1_python_install_all
-}
diff --git a/sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild b/sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild
deleted file mode 100644
index 1a04525ec154..000000000000
--- a/sci-libs/scikits_learn/scikits_learn-0.18.1.ebuild
+++ /dev/null
@@ -1,120 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 python3_5 )
-
-inherit distutils-r1 flag-o-matic
-
-MYPN="${PN/scikits_/scikit-}"
-MYP="${MYPN}-${PV}"
-
-DESCRIPTION="Python modules for machine learning and data mining"
-HOMEPAGE="https://scikit-learn.org"
-SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/nose[${PYTHON_USEDEP}]
- >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}]
- sci-libs/scikits[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- virtual/python-funcsigs[${PYTHON_USEDEP}]
- "
-DEPEND="
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- dev-python/setuptools[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- doc? (
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/sphinx[${PYTHON_USEDEP}]
- )"
-
-S="${WORKDIR}/${MYP}"
-
-PATCHES=( "${FILESDIR}/${P}-system-cblas.patch" )
-
-python_prepare_all() {
- # bug #397605
- [[ ${CHOST} == *-darwin* ]] \
- && append-ldflags -bundle "-undefined dynamic_lookup" \
- || append-ldflags -shared
-
- # scikits-learn now uses the horrible numpy.distutils automagic
- export SCIPY_FCONFIG="config_fc --noopt --noarch"
-
- # remove bundled cblas
- rm -r sklearn/src || die
-
- # use system joblib
- rm -r sklearn/externals/joblib || die
- sed -i -e '/joblib/d' sklearn/externals/setup.py || die
- for f in sklearn/{*/,}*.py; do
- sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \
- -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die
- done
-
- rm sklearn/externals/funcsigs.py || die
- rm sklearn/externals/odict.py || die
- for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do
- sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die
- done
-
- distutils-r1_python_prepare_all
-}
-
-python_compile() {
- distutils-r1_python_compile ${SCIPY_FCONFIG}
-}
-
-python_compile_all() {
- if use doc; then
- cd "${S}/doc" || die
- local d="${BUILD_DIR}"/lib
- ln -s "${S}"/sklearn/datasets/{data,descr,images} \
- "${d}"/sklearn/datasets || die
- VARTEXFONTS="${T}"/fonts \
- MPLCONFIGDIR="${BUILD_DIR}" \
- PYTHONPATH="${d}" \
- emake html
- rm -r "${d}"/sklearn/datasets/{data,descr,images} || die
- fi
-}
-
-python_test() {
- # doc builds and runs tests
- use doc && return
- distutils_install_for_testing ${SCIPY_FCONFIG}
- esetup.py \
- install --root="${T}/test-${EPYTHON}" \
- --no-compile ${SCIPY_FCONFIG}
- pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null
- nosetests -v sklearn --exe || die
- popd > /dev/null
-}
-
-python_install() {
- distutils-r1_python_install ${SCIPY_FCONFIG}
-}
-
-python_install_all() {
- find "${S}" -name \*LICENSE.txt -delete
- insinto /usr/share/doc/${PF}
- use doc && doins -r doc/_build/html
- use examples && doins -r examples
- distutils-r1_python_install_all
-}
diff --git a/sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild b/sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild
deleted file mode 100644
index 854f19af4e33..000000000000
--- a/sci-libs/scikits_learn/scikits_learn-0.18.2-r1.ebuild
+++ /dev/null
@@ -1,124 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 python3_{5,6} )
-
-inherit distutils-r1 flag-o-matic
-
-MYPN="${PN/scikits_/scikit-}"
-MYP="${MYPN}-${PV}"
-
-DESCRIPTION="Python modules for machine learning and data mining"
-HOMEPAGE="https://scikit-learn.org"
-SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples test"
-RESTRICT="!test? ( test )"
-
-# tried to unbundle virtual/python-funcsigs, funcsigs, odict
-# but it is a large mess to maintain
-
-RDEPEND="
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/nose[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- sci-libs/scikits[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas:=
- virtual/cblas:=
-"
-
-DEPEND="
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- dev-python/setuptools[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas:=
- virtual/cblas:=
- doc? (
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/sphinx[${PYTHON_USEDEP}]
- )
-"
-
-S="${WORKDIR}/${MYP}"
-
-PATCHES=( "${FILESDIR}/${PN}-0.18.1-system-cblas.patch" )
-
-python_prepare_all() {
- # bug #397605
- [[ ${CHOST} == *-darwin* ]] \
- && append-ldflags -bundle "-undefined dynamic_lookup" \
- || append-ldflags -shared
-
- # scikits-learn now uses the horrible numpy.distutils automagic
- export SCIPY_FCONFIG="config_fc --noopt --noarch"
-
- # remove bundled cblas
- rm -r sklearn/src || die
-
- # commented out, since it is a mess to maintain
- # use system joblib
- #rm -r sklearn/externals/joblib || die
- #sed -i -e '/joblib/d' sklearn/externals/setup.py || die
- #for f in sklearn/{*/,}*.py; do
- # sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \
- # -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die
- #done
-
- # use system funcsigs and odict
- #rm sklearn/externals/funcsigs.py || die
- #rm sklearn/externals/odict.py || die
- #for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do
- # sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die
- #done
- distutils-r1_python_prepare_all
-}
-
-python_compile() {
- distutils-r1_python_compile ${SCIPY_FCONFIG}
-}
-
-python_compile_all() {
- if use doc; then
- cd "${S}/doc" || die
- local d="${BUILD_DIR}/lib"
- ln -s \
- "${S}"/sklearn/datasets/{data,descr,images} \
- "${d}"/sklearn/datasets || die
- VARTEXFONTS="${T}"/fonts \
- MPLCONFIGDIR="${BUILD_DIR}" \
- PYTHONPATH="${d}" \
- emake html
- rm -r "${d}"/sklearn/datasets/{data,descr,images} || die
- fi
-}
-
-python_test() {
- # doc builds and runs tests
- use doc && return
- distutils_install_for_testing ${SCIPY_FCONFIG}
- esetup.py install \
- --root="${T}/test-${EPYTHON}" \
- --no-compile ${SCIPY_FCONFIG}
- pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null
- JOBLIB_MULTIPROCESSING=2 SKLEARN_SKIP_NETWORK_TESTS=1 nosetests -v sklearn --exe || die
- popd > /dev/null
-}
-
-python_install() {
- distutils-r1_python_install ${SCIPY_FCONFIG}
-}
-
-python_install_all() {
- find "${S}" -name \*LICENSE.txt -delete
- insinto /usr/share/doc/${PF}
- use doc && doins -r doc/_build/html
- use examples && doins -r examples
- distutils-r1_python_install_all
-}
diff --git a/sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild b/sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild
deleted file mode 100644
index 191789ac6c0f..000000000000
--- a/sci-libs/scikits_learn/scikits_learn-0.18.2.ebuild
+++ /dev/null
@@ -1,120 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 python3_{5,6} )
-
-inherit distutils-r1 flag-o-matic
-
-MYPN="${PN/scikits_/scikit-}"
-MYP="${MYPN}-${PV}"
-
-DESCRIPTION="Python modules for machine learning and data mining"
-HOMEPAGE="https://scikit-learn.org"
-SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples test"
-RESTRICT="!test? ( test )"
-
-RDEPEND="
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/nose[${PYTHON_USEDEP}]
- >=dev-python/numpy-1.6.1[lapack,${PYTHON_USEDEP}]
- sci-libs/scikits[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- virtual/python-funcsigs[${PYTHON_USEDEP}]
- "
-DEPEND="
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- dev-python/setuptools[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas
- virtual/cblas
- doc? (
- dev-python/joblib[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/sphinx[${PYTHON_USEDEP}]
- )"
-
-S="${WORKDIR}/${MYP}"
-
-PATCHES=( "${FILESDIR}/${PN}-0.18.1-system-cblas.patch" )
-
-python_prepare_all() {
- # bug #397605
- [[ ${CHOST} == *-darwin* ]] \
- && append-ldflags -bundle "-undefined dynamic_lookup" \
- || append-ldflags -shared
-
- # scikits-learn now uses the horrible numpy.distutils automagic
- export SCIPY_FCONFIG="config_fc --noopt --noarch"
-
- # remove bundled cblas
- rm -r sklearn/src || die
-
- # use system joblib
- rm -r sklearn/externals/joblib || die
- sed -i -e '/joblib/d' sklearn/externals/setup.py || die
- for f in sklearn/{*/,}*.py; do
- sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \
- -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die
- done
-
- rm sklearn/externals/funcsigs.py || die
- rm sklearn/externals/odict.py || die
- for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do
- sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die
- done
-
- distutils-r1_python_prepare_all
-}
-
-python_compile() {
- distutils-r1_python_compile ${SCIPY_FCONFIG}
-}
-
-python_compile_all() {
- if use doc; then
- cd "${S}/doc" || die
- local d="${BUILD_DIR}"/lib
- ln -s "${S}"/sklearn/datasets/{data,descr,images} \
- "${d}"/sklearn/datasets || die
- VARTEXFONTS="${T}"/fonts \
- MPLCONFIGDIR="${BUILD_DIR}" \
- PYTHONPATH="${d}" \
- emake html
- rm -r "${d}"/sklearn/datasets/{data,descr,images} || die
- fi
-}
-
-python_test() {
- # doc builds and runs tests
- use doc && return
- distutils_install_for_testing ${SCIPY_FCONFIG}
- esetup.py \
- install --root="${T}/test-${EPYTHON}" \
- --no-compile ${SCIPY_FCONFIG}
- pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null
- nosetests -v sklearn --exe || die
- popd > /dev/null
-}
-
-python_install() {
- distutils-r1_python_install ${SCIPY_FCONFIG}
-}
-
-python_install_all() {
- find "${S}" -name \*LICENSE.txt -delete
- insinto /usr/share/doc/${PF}
- use doc && doins -r doc/_build/html
- use examples && doins -r examples
- distutils-r1_python_install_all
-}
diff --git a/sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild b/sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild
deleted file mode 100644
index f6a48d144c7c..000000000000
--- a/sci-libs/scikits_learn/scikits_learn-0.19.0.ebuild
+++ /dev/null
@@ -1,107 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 python3_{5,6} )
-
-inherit distutils-r1 flag-o-matic
-
-MYPN="${PN/scikits_/scikit-}"
-MYP="${MYPN}-${PV}"
-
-DESCRIPTION="Python modules for machine learning and data mining"
-HOMEPAGE="https://scikit-learn.org"
-SRC_URI="mirror://pypi/${MYPN:0:1}/${MYPN}/${MYP}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="examples test"
-RESTRICT="!test? ( test )"
-
-# tried to unbundle virtual/python-funcsigs, funcsigs, odict
-# but it is a large mess to maintain
-
-RDEPEND="
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/nose[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- sci-libs/scikits[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas:=
- virtual/cblas:=
-"
-
-DEPEND="
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/numpy[lapack,${PYTHON_USEDEP}]
- dev-python/setuptools[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- virtual/blas:=
- virtual/cblas:=
-"
-
-S="${WORKDIR}/${MYP}"
-
-PATCHES=( "${FILESDIR}"/${PN}-0.18.1-system-cblas.patch )
-
-python_prepare_all() {
- # bug #397605
- [[ ${CHOST} == *-darwin* ]] \
- && append-ldflags -bundle "-undefined dynamic_lookup" \
- || append-ldflags -shared
-
- # scikits-learn now uses the horrible numpy.distutils automagic
- export SCIPY_FCONFIG="config_fc --noopt --noarch"
-
- # remove bundled cblas
- rm -r sklearn/src || die
-
- # commented out, since it is a mess to maintain
- # use system joblib
- #rm -r sklearn/externals/joblib || die
- #sed -i -e '/joblib/d' sklearn/externals/setup.py || die
- #for f in sklearn/{*/,}*.py; do
- # sed -r -e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \
- # -e 's/from (sklearn|\.|)\.externals import/import/' -i $f || die
- #done
-
- # use system funcsigs and odict
- #rm sklearn/externals/funcsigs.py || die
- #rm sklearn/externals/odict.py || die
- #for f in sklearn/{utils/fixes.py,gaussian_process/{tests/test_,}kernels.py}; do
- # sed -r -e 's/from (sklearn|\.|)\.externals\.funcsigs/from funcsigs/' -i $f || die
- #done
- distutils-r1_python_prepare_all
-}
-
-python_compile() {
- distutils-r1_python_compile ${SCIPY_FCONFIG}
-}
-
-python_test() {
- # doc builds and runs tests
- use doc && return
- distutils_install_for_testing ${SCIPY_FCONFIG}
- esetup.py install \
- --root="${T}/test-${EPYTHON}" \
- --no-compile ${SCIPY_FCONFIG}
- pushd "${T}/test-${EPYTHON}/$(python_get_sitedir)" || die > /dev/null
- JOBLIB_MULTIPROCESSING=2 SKLEARN_SKIP_NETWORK_TESTS=1 nosetests -v sklearn --exe || die
- popd > /dev/null
-}
-
-python_install() {
- distutils-r1_python_install ${SCIPY_FCONFIG}
-}
-
-python_install_all() {
- find "${S}" -name \*LICENSE.txt -delete
- distutils-r1_python_install_all
- if use examples; then
- dodoc -r examples
- docompress -x /usr/share/doc/${PF}/examples
- fi
-
-}