aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authormschubertv <mschu.dev@gmail.com>2023-12-19 10:34:33 +0000
committerAndrew Ammerlaan <andrewammerlaan@gentoo.org>2024-01-30 14:58:21 +0100
commit25fafdd5d2ff7fccce1eec17b989ea62aa84d680 (patch)
treea1591af3fbb66db3942afeaf21e22be49f91623f /sci-biology
parentsci-biology/neuroconv: updated dependency (diff)
downloadsci-25fafdd5d2ff7fccce1eec17b989ea62aa84d680.tar.gz
sci-25fafdd5d2ff7fccce1eec17b989ea62aa84d680.tar.bz2
sci-25fafdd5d2ff7fccce1eec17b989ea62aa84d680.zip
sci-biology/fastp: add ebuild
Signed-off-by: Michael Schubert <mschu.dev@gmail.com> Closes: https://github.com/gentoo/sci/pull/1225 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/fastp/Manifest1
-rw-r--r--sci-biology/fastp/fastp-0.23.4.ebuild20
-rw-r--r--sci-biology/fastp/metadata.xml11
3 files changed, 32 insertions, 0 deletions
diff --git a/sci-biology/fastp/Manifest b/sci-biology/fastp/Manifest
new file mode 100644
index 000000000..c158050fa
--- /dev/null
+++ b/sci-biology/fastp/Manifest
@@ -0,0 +1 @@
+DIST fastp-0.23.4.tar.gz 164071 BLAKE2B 58745d494b83bbf9ae34593159228dbef5c854ab856af91fea8770fef171ed7b3053a4cac8c31053af3dcd91d4298fddb7594670a32963f53f75bd5fa1ec3a68 SHA512 2c929e974708f8cd2d8cab95d59c0a5fd01bea912f6ba5d08841fd929f0f5019ef89e506c771057bd02b879836ae30564b8417271866b6bbcb4917fbeb387e76
diff --git a/sci-biology/fastp/fastp-0.23.4.ebuild b/sci-biology/fastp/fastp-0.23.4.ebuild
new file mode 100644
index 000000000..70d5ce330
--- /dev/null
+++ b/sci-biology/fastp/fastp-0.23.4.ebuild
@@ -0,0 +1,20 @@
+# Copyright 1999-2023 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DESCRIPTION="An ultra-fast all-in-one FASTQ preprocessor"
+HOMEPAGE="https://github.com/OpenGene/fastp"
+SRC_URI="https://github.com/OpenGene/fastp/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz"
+KEYWORDS="~amd64"
+
+LICENSE="MIT"
+SLOT="0"
+
+DEPEND="app-arch/libdeflate
+ dev-libs/isa-l"
+
+src_install() {
+ dodir /usr/bin
+ emake PREFIX="${ED}"/usr install
+}
diff --git a/sci-biology/fastp/metadata.xml b/sci-biology/fastp/metadata.xml
new file mode 100644
index 000000000..d51d87c5a
--- /dev/null
+++ b/sci-biology/fastp/metadata.xml
@@ -0,0 +1,11 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>mschu.dev@gmail.com</email>
+ <name>Michael Schubert</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">OpenGene/fastp</remote-id>
+ </upstream>
+</pkgmetadata>