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authorHorea Christian <chr@chymera.eu>2019-07-07 19:34:49 +0200
committerHorea Christian <chr@chymera.eu>2019-07-07 19:34:49 +0200
commitfd86aae6d6a0f01e322622a4eae5c1efa75dc827 (patch)
tree9ad29d17675b198cb61b2f367f9137fe33996c92 /sci-biology/lemur-brain-atlas
parentsci-biology/drlfom_bidsdata: new data package (diff)
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sci-biology/lemur-brain-atlas: new data package
Package-Manager: Portage-2.3.68, Repoman-2.3.16 Signed-off-by: Horea Christian <chr@chymera.eu>
Diffstat (limited to 'sci-biology/lemur-brain-atlas')
-rw-r--r--sci-biology/lemur-brain-atlas/Manifest1
-rw-r--r--sci-biology/lemur-brain-atlas/lemur-brain-atlas-0.1.ebuild23
-rw-r--r--sci-biology/lemur-brain-atlas/metadata.xml20
3 files changed, 44 insertions, 0 deletions
diff --git a/sci-biology/lemur-brain-atlas/Manifest b/sci-biology/lemur-brain-atlas/Manifest
new file mode 100644
index 000000000..5e589cac5
--- /dev/null
+++ b/sci-biology/lemur-brain-atlas/Manifest
@@ -0,0 +1 @@
+DIST lemur-brain-atlas-0.1.tar.gz 79871940 BLAKE2B fee879d1d8b87ef72e23ec5fc32d79679414986ec54869fb50d9911968d55d5d27440432f71981fbda76f8584960640a89c5c082a7427e147a17a39e13bdd5a0 SHA512 a54b55b93b52b69eabc870ac157e9e01ae5c6e56cdca516e61546eb2e78c032ac51088b11ab12b708844c93a4179a556a670550fc7a1a7ec60de81cba8e40b33
diff --git a/sci-biology/lemur-brain-atlas/lemur-brain-atlas-0.1.ebuild b/sci-biology/lemur-brain-atlas/lemur-brain-atlas-0.1.ebuild
new file mode 100644
index 000000000..6c6d80a44
--- /dev/null
+++ b/sci-biology/lemur-brain-atlas/lemur-brain-atlas-0.1.ebuild
@@ -0,0 +1,23 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+DESCRIPTION="MRI Brain Template and Atlas of the Mouse Lemur"
+HOMEPAGE="https://www.nitrc.org/projects/mouselemuratlas"
+SRC_URI="https://www.nitrc.org/frs/downloadlink.php/10867 -> ${P}.tar.gz"
+
+LICENSE="CeCILL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+RDEPEND=""
+DEPEND=""
+
+S="${WORKDIR}/MIRCen-MouseLemurAtlas_V0.01"
+
+src_install() {
+ insinto "/usr/share/${PN}"
+ doins *
+}
diff --git a/sci-biology/lemur-brain-atlas/metadata.xml b/sci-biology/lemur-brain-atlas/metadata.xml
new file mode 100644
index 000000000..2397e4252
--- /dev/null
+++ b/sci-biology/lemur-brain-atlas/metadata.xml
@@ -0,0 +1,20 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>chr@chymera.eu</email>
+ <name>Horea Christian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
+ MRI template and 120-region atlas for the mouse lemur primate Microcebus
+ murinus. Generated from 34 animals aged 15-58 months old scanned at 7T
+ using a T2-weighted sequence, resolution 115 × 115 × 230 µm. The template
+ was up-sampled to 91 µm isotropic for hand-segmentation of structures,
+ and also used to create probability maps of grey matter, white matter and
+ cerebro-spinal fluid.
+ </longdescription>
+</pkgmetadata>