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authorMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2017-01-29 19:13:23 +0100
committerMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2017-01-29 19:13:23 +0100
commit8d6ea3fcf39703a49e09ad80d65f25988d54c17a (patch)
tree7e0f11f4b40de1d9b6a49d0528f2f959cb11ef48 /sci-biology/SPAdes
parentsci-biology/SPAdes: version bump, remove old, src_install actually does also ... (diff)
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sci-biology/SPAdes: install more HTML documentation
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology/SPAdes')
-rw-r--r--sci-biology/SPAdes/Manifest3
-rw-r--r--sci-biology/SPAdes/SPAdes-3.9.1.ebuild7
2 files changed, 8 insertions, 2 deletions
diff --git a/sci-biology/SPAdes/Manifest b/sci-biology/SPAdes/Manifest
index abaa184aa..6690f6e5b 100644
--- a/sci-biology/SPAdes/Manifest
+++ b/sci-biology/SPAdes/Manifest
@@ -1,2 +1,5 @@
DIST SPAdes-3.9.1.tar.gz 6873127 SHA256 da8e923fb1d5c1508b11a2928a8ca3efd8bf22a723d257f0e511c033f74022d8 SHA512 c0fc6cd64c89f817c753de5b9b6b9696a21f6b2fc089febd5a5a225076d245000eb6739f4bbf67af12b679d4a9788ece684d16f0562dd15f2d5c771492b94634 WHIRLPOOL b3d052dc24a9b56b62cbbe9c69b85790e9e49dae7faef3ec4cbb12e08253120eea98f9d7901e5634f33430c3e038ed590f07a02cc193843fc0f33cf404a4d4a0
+DIST SPAdes-3.9.1_dipspades_manual.html 12561 SHA256 c4240cd2f8e29e428be03a76080b8d7b1360a5d4e2034472df43f435319b5e1c SHA512 618284c899b5c0f167b91638ac3ca4d7ee2c932f5acbfa6225f43276b073259000022f12afa3d8df26dfd967085b3d2d11ca006766169199afc02de111a78db4 WHIRLPOOL 0fa1a38523c23d32efbb4af9a16d49cf25a19b3f13a429ee2f926c04865d969fbf6b99410cf188669206d4600423f50a56143f915c1c24d837774e9cf1203505
DIST SPAdes-3.9.1_manual.html 59108 SHA256 db823fc5f903b15e3fbb766ca1ffd8dcd499a31bdbb6b90bcd99cf26d35c655b SHA512 b0dfec879322f9e47aa646b61dda434504f1e4312ddd986d243bc60dcef3d5d89814f4e7237a4b6501588ce0df49c95ca10712ff4b18b4440ad8ab2d9783f691 WHIRLPOOL b9f2f961bf8d51a4638b37c1335f2c8e6b8b7a15039c82ae98d38321afc8cc1d78515eeabd83d88fafc6fe71f5c07d33e0c6051e89378e2fd1f90db04e357987
+DIST SPAdes-3.9.1_rnaspades_manual.html 3725 SHA256 f9d76febea6e58e8c935b7e50febcb36516643513400723436d5b46875d97a40 SHA512 03fc591f78ea09436e53896c6c31fae195ee11d2eca74f57ea80b366e6a71b969f6e60bf96cbf5e948a1d708b14041f803c1987b3f918585d867b8f66d85d0dd WHIRLPOOL 68895b8ad097e681592ecc6a337ba5e4ebed627bc4a99a4fea1801634c3ea98379dece96a347f8ff755a7d84d44ef1e187306401dc6a93d19e1ac707fa6204b2
+DIST SPAdes-3.9.1_truspades_manual.html 10769 SHA256 eb8b40beb331eca3d8fd394cd0ce2237a8b6d0245f63ba2735bdacd5bcf5858a SHA512 e19a9385ae63f32cb232c90abd16eb8563b6b8f0abcdb2aadcfdf35cfe4aee8cf329fc97e5a2a7149ac9c6fce40791b5a89c9431de90d6e1d3651b6f0a5e221b WHIRLPOOL 9f5f863ddf65ceca70021948459a8a492f90bc879870d11a04ef85c510574239ab0ad1139bca8a835c7df9c785599385dff5657ec68174a67617bb8e77c53a87
diff --git a/sci-biology/SPAdes/SPAdes-3.9.1.ebuild b/sci-biology/SPAdes/SPAdes-3.9.1.ebuild
index 1a5a5d584..5c8b66fb5 100644
--- a/sci-biology/SPAdes/SPAdes-3.9.1.ebuild
+++ b/sci-biology/SPAdes/SPAdes-3.9.1.ebuild
@@ -12,7 +12,10 @@ DESCRIPTION="De novo de Bruijn genome assembler (bacteria to fungi) or uneven co
HOMEPAGE="http://bioinf.spbau.ru/en/spades"
SRC_URI="
http://spades.bioinf.spbau.ru/release${PV}/SPAdes-${PV}.tar.gz
- http://spades.bioinf.spbau.ru/release${PV}/manual.html -> ${P}_manual.html"
+ http://spades.bioinf.spbau.ru/release${PV}/manual.html -> ${P}_manual.html
+ http://spades.bioinf.spbau.ru/release3.9.1/dipspades_manual.html -> ${P}_dipspades_manual.html
+ http://spades.bioinf.spbau.ru/release3.9.1/rnaspades_manual.html -> ${P}_rnaspades_manual.html
+ http://spades.bioinf.spbau.ru/release3.9.1/truspades_manual.html -> ${P}_truspades_manual.html"
LICENSE="GPL-2"
SLOT="0"
@@ -45,5 +48,5 @@ pkg_pretend() {
src_install(){
PREFIX="${ED}"/usr ./spades_compile.sh || die
insinto /usr/share/"${PN}"
- dodoc "${DISTDIR}"/manual.html
+ dodoc "${DISTDIR}"/${P}_*manual.html
}