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-rw-r--r--dev-python/astropy-helpers/Manifest1
-rw-r--r--dev-python/astropy-helpers/astropy-helpers-1.1.1.ebuild23
-rw-r--r--dev-python/astropy-helpers/metadata.xml16
-rw-r--r--dev-python/astropy/Manifest1
-rw-r--r--dev-python/astropy/astropy-1.1.1.ebuild88
-rw-r--r--dev-python/astropy/files/astropy-1.0.4-system-configobj.patch14
-rw-r--r--dev-python/astropy/files/astropy-1.0.4-system-six.patch12
-rw-r--r--dev-python/astropy/files/astropy-1.1.1-fix-wcs.patch15
-rw-r--r--dev-python/astropy/files/astropy-1.1.1-mark-kown-failures.patch99
-rw-r--r--dev-python/astropy/files/astropy-ply.py58
-rw-r--r--dev-python/astropy/metadata.xml16
11 files changed, 0 insertions, 343 deletions
diff --git a/dev-python/astropy-helpers/Manifest b/dev-python/astropy-helpers/Manifest
deleted file mode 100644
index 6cfc4c9..0000000
--- a/dev-python/astropy-helpers/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST astropy-helpers-1.1.1.tar.gz 132083 SHA256 2da74e8e6b08f3c378fc5f863460bc5c45f4f08e47ed2887cff0a26692aadd4b SHA512 432580de37583b6195b6827dae46516553ceba71bfc038bb609bd59f158f3eb082925dc03f7d9b8ef10d9da68e0d40ee0fa0dc915d72ee0391d58d851a7114bf WHIRLPOOL a64b950acb452307e2f43206c2ff6d102856c0c60a7d4058a59ab8c82338692fee4e432d7dea78b865dea2401536a101713615079c3a1eafbfb4b8c034f57047
diff --git a/dev-python/astropy-helpers/astropy-helpers-1.1.1.ebuild b/dev-python/astropy-helpers/astropy-helpers-1.1.1.ebuild
deleted file mode 100644
index fd68055..0000000
--- a/dev-python/astropy-helpers/astropy-helpers-1.1.1.ebuild
+++ /dev/null
@@ -1,23 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 python3_{3,4,5} )
-
-inherit distutils-r1
-
-DESCRIPTION="Helpers for Astropy and Affiliated packages"
-HOMEPAGE="https://github.com/astropy/astropy-helpers"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86 ~x86-linux"
-
-python_prepare_all() {
- sed -e '/import ah_bootstrap/d' -i setup.py || die "Removing ah_bootstrap failed"
- distutils-r1_python_prepare_all
-}
diff --git a/dev-python/astropy-helpers/metadata.xml b/dev-python/astropy-helpers/metadata.xml
deleted file mode 100644
index 845f41e..0000000
--- a/dev-python/astropy-helpers/metadata.xml
+++ /dev/null
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
- astropy-helpers is a collection of build tools used by astropy
- that may be used by other projects.
- </longdescription>
- <upstream>
- <remote-id type="pypi">astropy-helpers</remote-id>
- <remote-id type="github">astropy/astropy-helpers</remote-id>
- </upstream>
-</pkgmetadata>
diff --git a/dev-python/astropy/Manifest b/dev-python/astropy/Manifest
deleted file mode 100644
index 591f179..0000000
--- a/dev-python/astropy/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST astropy-1.1.1.tar.gz 8157305 SHA256 4d2e7a8bd5191a66d7e1a52beefb4a0b6f496a1e9e8212422613219cb514769f SHA512 bc3c370da32d5f0098dbfc2808dba9d4d4424d3dcfba4d7ffd84b39569387b79ad93086e10678c259237f9cfe1229725501d0dc4eba51c9d01a4cd8a72024fb4 WHIRLPOOL 5b40955f56e6f080ad93b224eabd345565ef9f5e7f5ccb00e2737bd714117bc9b35922a044fe4ccaddb9d30fa72e13dd560577392120bfbd0a9d10c8aaa5aa01
diff --git a/dev-python/astropy/astropy-1.1.1.ebuild b/dev-python/astropy/astropy-1.1.1.ebuild
deleted file mode 100644
index cbe1283..0000000
--- a/dev-python/astropy/astropy-1.1.1.ebuild
+++ /dev/null
@@ -1,88 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 python3_{4,5} )
-
-inherit distutils-r1
-
-DESCRIPTION="Core functionality for performing astrophysics with Python"
-HOMEPAGE="http://astropy.org/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc test"
-
-RDEPEND="
- >=dev-libs/expat-2.1.0:0=
- dev-python/configobj[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- dev-python/ply[${PYTHON_USEDEP}]
- dev-python/six[${PYTHON_USEDEP}]
- >=sci-astronomy/erfa-1.2:0=
- >=sci-astronomy/wcslib-5:0=
- >=sci-libs/cfitsio-3.360:0=
- sys-libs/zlib:0="
-DEPEND="${RDEPEND}
- >=dev-python/astropy-helpers-1.1[${PYTHON_USEDEP}]
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/setuptools[${PYTHON_USEDEP}]
- virtual/pkgconfig
- doc? (
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/sphinx[${PYTHON_USEDEP}]
- media-gfx/graphviz
- )
- test? (
- dev-libs/libxml2[${PYTHON_USEDEP}]
- dev-python/pytest[${PYTHON_USEDEP}]
- dev-python/h5py[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- sci-libs/scipy[${PYTHON_USEDEP}]
- )"
-
-PATCHES=(
- "${FILESDIR}/${PN}-1.0.4-system-six.patch"
- "${FILESDIR}/${PN}-1.0.4-system-configobj.patch"
- "${FILESDIR}/${PN}-1.1.1-fix-wcs.patch"
- "${FILESDIR}/${PN}-1.1.1-mark-kown-failures.patch"
-)
-
-python_prepare_all() {
- export mydistutilsargs="--offline"
- export ASTROPY_USE_SYSTEM_PYTEST=True
- rm -r ${PN}_helpers || die
- cp "${FILESDIR}"/astropy-ply.py astropy/extern/ply.py || die
- rm -r cextern/{expat,erfa,cfitsio,wcslib} || die
- sed -i -e '/auto_use/s/True/False/' setup.cfg || die
- cat >> setup.cfg <<-EOF
-
- [build]
- use_system_libraries=1
- EOF
-
- distutils-r1_python_prepare_all
-}
-
-python_compile_all() {
- if use doc; then
- python_export_best
- VARTEXFONTS="${T}"/fonts \
- MPLCONFIGDIR="${BUILD_DIR}" \
- PYTHONPATH="${BUILD_DIR}"/lib \
- esetup.py build_sphinx
- fi
-}
-
-python_test() {
- esetup.py test
-}
-
-python_install_all() {
- use doc && local HTML_DOCS=( docs/_build/html/. )
- distutils-r1_python_install_all
-}
diff --git a/dev-python/astropy/files/astropy-1.0.4-system-configobj.patch b/dev-python/astropy/files/astropy-1.0.4-system-configobj.patch
deleted file mode 100644
index 9578c0d..0000000
--- a/dev-python/astropy/files/astropy-1.0.4-system-configobj.patch
+++ /dev/null
@@ -1,14 +0,0 @@
-diff -ur astropy-0.4.1/astropy/config/configuration.py astropy-0.4.1.configobj/astropy/config/configuration.py
---- astropy-0.4.1/astropy/config/configuration.py 2014-09-01 22:41:30.066853605 +0200
-+++ astropy-0.4.1.configobj/astropy/config/configuration.py 2014-09-01 22:40:50.793528942 +0200
-@@ -23,7 +23,8 @@
- import types
- from warnings import warn
-
--from ..extern.configobj import configobj, validate
-+import configobj
-+import validate
- from ..utils.exceptions import AstropyWarning, AstropyDeprecationWarning
- from ..utils import find_current_module
- from ..utils.misc import InheritDocstrings
-
diff --git a/dev-python/astropy/files/astropy-1.0.4-system-six.patch b/dev-python/astropy/files/astropy-1.0.4-system-six.patch
deleted file mode 100644
index 8bfab98..0000000
--- a/dev-python/astropy/files/astropy-1.0.4-system-six.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -ur astropy-0.4.1/astropy/extern/six.py astropy-0.4.1.six/astropy/extern/six.py
---- astropy-0.4.1/astropy/extern/six.py 2014-09-01 21:57:56.663393218 +0200
-+++ astropy-0.4.1.six/astropy/extern/six.py 2014-09-01 21:59:02.940933294 +0200
-@@ -13,7 +13,7 @@
- # Update this to prevent Astropy from using its bundled copy of six
- # (but only if some other version of at least _SIX_MIN_VERSION can
- # be provided)
--_SIX_SEARCH_PATH = ['astropy.extern.bundled.six', 'six']
-+_SIX_SEARCH_PATH = ['six', 'astropy.extern.bundled.six']
-
-
- def _find_module(name, path=None):
diff --git a/dev-python/astropy/files/astropy-1.1.1-fix-wcs.patch b/dev-python/astropy/files/astropy-1.1.1-fix-wcs.patch
deleted file mode 100644
index efb1273..0000000
--- a/dev-python/astropy/files/astropy-1.1.1-fix-wcs.patch
+++ /dev/null
@@ -1,15 +0,0 @@
-Author: Kacper Kowalik <xarthisius.kk@gmail.com>
-Description: Copy keys to a list, since orignal map is modified
-Url: https://github.com/astropy/astropy/issues/4477
-Bug: https://github.com/astropy/astropy/issues/4460
---- a/astropy/wcs/wcs.py
-+++ b/astropy/wcs/wcs.py
-@@ -988,7 +988,7 @@
- """
- # Never pass SIP coefficients to wcslib
- # CTYPE must be passed with -SIP to wcslib
-- for key in (m.group() for m in map(SIP_KW.match, header.keys())
-+ for key in (m.group() for m in map(SIP_KW.match, list(header))
- if m is not None):
- del header[key]
-
diff --git a/dev-python/astropy/files/astropy-1.1.1-mark-kown-failures.patch b/dev-python/astropy/files/astropy-1.1.1-mark-kown-failures.patch
deleted file mode 100644
index 2e2c82a..0000000
--- a/dev-python/astropy/files/astropy-1.1.1-mark-kown-failures.patch
+++ /dev/null
@@ -1,99 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Mark all known test failures as xfail.
- These failures have been discussed with upstream.
---- a/astropy/io/fits/tests/test_connect.py
-+++ b/astropy/io/fits/tests/test_connect.py
-@@ -136,6 +136,8 @@
- # while reading is to check whether col.null is present. For float columns, col.null
- # is not initialized
-
-+# see https://github.com/astropy/astropy/issues/3415
-+ @pytest.mark.xfail()
- def test_read_from_fileobj(self, tmpdir):
- filename = str(tmpdir.join('test_read_from_fileobj.fits'))
- hdu = BinTableHDU(self.data)
-@@ -172,6 +174,8 @@
- def setup_method(self, method):
- warnings.filterwarnings('always')
-
-+# see https://github.com/astropy/astropy/issues/3415
-+ @pytest.mark.xfail()
- def test_read(self, tmpdir):
- filename = str(tmpdir.join('test_read.fits'))
- self.hdus.writeto(filename)
-@@ -189,6 +193,8 @@
- Table.read(filename, hdu=0)
- assert exc.value.args[0] == 'No table found in hdu=0'
-
-+# see https://github.com/astropy/astropy/issues/3415
-+ @pytest.mark.xfail()
- @pytest.mark.parametrize('hdu', [1, 'first'])
- def test_read_with_hdu_1(self, tmpdir, hdu):
- filename = str(tmpdir.join('test_read_with_hdu_1.fits'))
---- a/astropy/wcs/wcs.py
-+++ b/astropy/wcs/wcs.py
-@@ -84,6 +84,8 @@
- if six.PY3 or platform.system() == 'Windows':
- __doctest_skip__ = ['WCS.all_world2pix']
-
-+# see https://github.com/astropy/astropy/issues/3380
-+__doctest_skip__ = ['WCS.all_world2pix']
-
- if _wcs is not None:
- WCSBase = _wcs._Wcs
---- a/astropy/tests/tests/test_socketblocker.py
-+++ b/astropy/tests/tests/test_socketblocker.py
-@@ -66,8 +66,8 @@
- def _square(x):
- return x ** 2
-
--
--@pytest.mark.skipif('not PY3_4 or sys.platform == "win32" or sys.platform.startswith("gnu0")')
-+# see https://github.com/astropy/astropy/issues/4193
-+@pytest.mark.skipif(True, reason="Blocks on Debian CI test")
- def test_multiprocessing_forkserver():
- """
- Test that using multiprocessing with forkserver works. Perhaps
---- a/astropy/coordinates/tests/test_api_ape5.py
-+++ b/astropy/coordinates/tests/test_api_ape5.py
-@@ -319,7 +319,8 @@
- # coordinate object, and one that returns a cartesian matrix but does *not*
- # require `newobj` or `fk5frame` - this allows optimization of the transform.
-
--
-+# Temporary mark until scipy/numpy is fully on 3.5
-+@pytest.mark.xfail()
- def test_highlevel_api():
- J2001 = time.Time('J2001', scale='utc')
-
---- a/astropy/visualization/tests/test_histogram.py
-+++ b/astropy/visualization/tests/test_histogram.py
-@@ -50,6 +50,8 @@
- assert patches2[0].axes is ax[1]
-
-
-+# see https://github.com/astropy/astropy/issues/4329
-+@pytest.mark.xfail()
- @pytest.mark.skipif('not HAS_PLT')
- def test_hist_autobin(rseed=0):
- rng = np.random.RandomState(rseed)
---- a/astropy/table/tests/test_info.py
-+++ b/astropy/table/tests/test_info.py
-@@ -6,6 +6,7 @@
- import warnings
- import numpy as np
-
-+from ...tests.helper import pytest
- from ...extern import six
- from ... import units as u
- from ... import time
-@@ -225,7 +226,8 @@
- t.info(out=out)
- assert out.getvalue().splitlines() == exp
-
--
-+# see https://github.com/astropy/astropy/issues/4336
-+@pytest.mark.xfail()
- def test_ignore_warnings():
- t = table.Table([[np.nan, np.nan]])
- with warnings.catch_warnings(record=True) as warns:
diff --git a/dev-python/astropy/files/astropy-ply.py b/dev-python/astropy/files/astropy-ply.py
deleted file mode 100644
index 19eb104..0000000
--- a/dev-python/astropy/files/astropy-ply.py
+++ /dev/null
@@ -1,58 +0,0 @@
-# Licensed under a 3-clause BSD style license - see LICENSE.rst
-
-"""
-Handle loading ply package from system or from the bundled copy
-"""
-
-import imp
-from distutils.version import StrictVersion
-
-
-def _find_module(name, path=None):
- """
- Alternative to `imp.find_module` that can also search in subpackages.
- """
-
- parts = name.split('.')
-
- for part in parts:
- if path is not None:
- path = [path]
-
- fh, path, descr = imp.find_module(part, path)
-
- return fh, path, descr
-
-_PLY_MIN_VERSION = StrictVersion('3.4')
-
-# Update this to prevent Astropy from using its bundled copy of ply
-# (but only if some other version of at least _PLY_MIN_VERSION can
-# be provided)
-_PLY_SEARCH_PATH = ['ply']
-
-
-for mod_name in _PLY_SEARCH_PATH:
- try:
- mod_info = _find_module(mod_name)
- #mod_lex_info = _find_module(mod_name + '.lex')
- except ImportError:
- continue
-
- mod = imp.load_module(__name__, *mod_info)
- #mod_lex = imp.load_module(__name__ + '.lex', *mod_lex_info)
-
- try:
- # if StrictVersion(mod_lex.__version__) >= _PLY_MIN_VERSION:
- # break
- break
- except (AttributeError, ValueError):
- # Attribute error if the ply module isn't what it should be and doesn't
- # have a .__version__; ValueError if the version string exists but is
- # somehow bogus/unparseable
- continue
-else:
- raise ImportError(
- "Astropy requires the 'ply' module of minimum version {0}; "
- "normally this is bundled with the astropy package so if you get "
- "this warning consult the packager of your Astropy "
- "distribution.".format(_PLY_MIN_VERSION))
diff --git a/dev-python/astropy/metadata.xml b/dev-python/astropy/metadata.xml
deleted file mode 100644
index 85615ff..0000000
--- a/dev-python/astropy/metadata.xml
+++ /dev/null
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
- Astropy is a community-driven package intended to contain much of
- the core functionality and some common tools needed for performing
- astronomy and astrophysics with Python.
-</longdescription>
- <upstream>
- <remote-id type="pypi">astropy</remote-id>
- </upstream>
-</pkgmetadata>