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-rw-r--r--sci-biology/trnascan-se/ChangeLog8
-rw-r--r--sci-biology/trnascan-se/Manifest4
-rw-r--r--sci-biology/trnascan-se/files/digest-trnascan-se-1.23-r1 (renamed from sci-biology/trnascan-se/files/digest-trnascan-se-1.23)0
-rw-r--r--sci-biology/trnascan-se/trnascan-se-1.23-r1.ebuild (renamed from sci-biology/trnascan-se/trnascan-se-1.23.ebuild)25
4 files changed, 26 insertions, 11 deletions
diff --git a/sci-biology/trnascan-se/ChangeLog b/sci-biology/trnascan-se/ChangeLog
index 539c49bbb6ba..6e72da4e8dcc 100644
--- a/sci-biology/trnascan-se/ChangeLog
+++ b/sci-biology/trnascan-se/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/trnascan-se
# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/ChangeLog,v 1.2 2005/03/02 02:27:47 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/ChangeLog,v 1.3 2005/08/12 21:14:38 ribosome Exp $
+
+*trnascan-se-1.23-r1 (12 Aug 2005)
+
+ 12 Aug 2005; Olivier Fisette <ribosome@gentoo.org>
+ -trnascan-se-1.23.ebuild, +trnascan-se-1.23-r1.ebuild:
+ Fixed bug #102258: Broken hard-coded paths.
01 Mar 2005; Olivier Fisette <ribosome@gentoo.org>
trnascan-se-1.23.ebuild:
diff --git a/sci-biology/trnascan-se/Manifest b/sci-biology/trnascan-se/Manifest
index 000bb03eaba1..18671136dfb7 100644
--- a/sci-biology/trnascan-se/Manifest
+++ b/sci-biology/trnascan-se/Manifest
@@ -1,4 +1,4 @@
-MD5 a369c736e9dc2fc9af75a4a6f8c55bf3 trnascan-se-1.23.ebuild 1001
MD5 916d043efc71fc37e2eb87527a413abd ChangeLog 466
MD5 7f383d52a94b63930cf35ef743535739 metadata.xml 594
-MD5 9ecd6913936da62c55e691e4123d3f4f files/digest-trnascan-se-1.23 69
+MD5 5412bb26879844cc10275461804c4e47 trnascan-se-1.23-r1.ebuild 1217
+MD5 9ecd6913936da62c55e691e4123d3f4f files/digest-trnascan-se-1.23-r1 69
diff --git a/sci-biology/trnascan-se/files/digest-trnascan-se-1.23 b/sci-biology/trnascan-se/files/digest-trnascan-se-1.23-r1
index 8079b6849520..8079b6849520 100644
--- a/sci-biology/trnascan-se/files/digest-trnascan-se-1.23
+++ b/sci-biology/trnascan-se/files/digest-trnascan-se-1.23-r1
diff --git a/sci-biology/trnascan-se/trnascan-se-1.23.ebuild b/sci-biology/trnascan-se/trnascan-se-1.23-r1.ebuild
index 6163ab26b381..805ec8f762f0 100644
--- a/sci-biology/trnascan-se/trnascan-se-1.23.ebuild
+++ b/sci-biology/trnascan-se/trnascan-se-1.23-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/trnascan-se-1.23.ebuild,v 1.2 2005/03/02 02:27:47 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/trnascan-se/trnascan-se-1.23-r1.ebuild,v 1.1 2005/08/12 21:14:38 ribosome Exp $
inherit toolchain-funcs
@@ -15,19 +15,28 @@ IUSE=""
DEPEND="dev-lang/perl"
+src_unpack() {
+ unpack ${A}
+ cd ${S}
+ sed -e "s%BINDIR = \$(HOME)/bin%BINDIR = ${ROOT}/usr/bin%" \
+ -e "s%LIBDIR = \$(HOME)/lib/tRNAscan-SE%LIBDIR = ${ROOT}/usr/lib/${PN}%" \
+ -e "s%MANDIR = \$(HOME)/man%MANDIR = ${ROOT}/usr/share/man%" \
+ -e "s%CC = gcc%CC = $(tc-getCC)%" \
+ -e "s%CFLAGS = -O%CFLAGS = ${CFLAGS}%" \
+ -i Makefile || die
+}
+
src_compile() {
- sed -i -e "s%BINDIR = \$(HOME)/bin%BINDIR = ${D}/usr/bin%" \
- -e "s%LIBDIR = \$(HOME)/lib/tRNAscan-SE%LIBDIR = ${D}/usr/share/${PN}%" \
- -e "s%MANDIR = \$(HOME)/man%MANDIR = ${D}/usr/share/man%" \
- -e "s%CC = gcc%CC = $(tc-getCC)%" \
- -e "s%CFLAGS = -O%CFLAGS = ${CFLAGS}%" \
- Makefile || die
emake || die
+ mv tRNAscan-SE.man tRNAscan-SE.man.1
}
src_install() {
- make install || die
+ dobin covels-SE coves-SE eufindtRNA tRNAscan-SE trnascan-1.4
+ doman tRNAscan-SE.man.1
dodoc MANUAL README Release.history
+ insinto /usr/lib/${PN}/
+ doins *.cm gcode.* Dsignal TPCsignal
insinto /usr/share/doc/${PF}
doins Manual.ps
}