diff options
Diffstat (limited to 'sci-biology/aaindex')
| -rw-r--r-- | sci-biology/aaindex/ChangeLog | 5 | ||||
| -rw-r--r-- | sci-biology/aaindex/aaindex-6.0.ebuild | 18 |
2 files changed, 15 insertions, 8 deletions
diff --git a/sci-biology/aaindex/ChangeLog b/sci-biology/aaindex/ChangeLog index 83ec934591c1..8e8044e0e6f3 100644 --- a/sci-biology/aaindex/ChangeLog +++ b/sci-biology/aaindex/ChangeLog @@ -1,6 +1,9 @@ # ChangeLog for sci-biology/aaindex # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.3 2005/01/14 22:47:33 j4rg0n Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.4 2005/02/23 03:59:50 ribosome Exp $ + + 22 Feb 2005; Olivier Fisette <ribosome@gentoo.org> aaindex-6.0.ebuild: + Added support for the "emboss" and "minimal" "USE" flags. 14 Jan 2005; Lina Pezzella <j4rg0n@gentoo.org> aaindex-6.0.ebuild: Stable ppc-macos. diff --git a/sci-biology/aaindex/aaindex-6.0.ebuild b/sci-biology/aaindex/aaindex-6.0.ebuild index 5bd319ddde9c..62e5995d2f45 100644 --- a/sci-biology/aaindex/aaindex-6.0.ebuild +++ b/sci-biology/aaindex/aaindex-6.0.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2005 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/aaindex-6.0.ebuild,v 1.3 2005/01/14 22:47:33 j4rg0n Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/aaindex-6.0.ebuild,v 1.4 2005/02/23 03:59:50 ribosome Exp $ DESCRIPTION="Amino acid indices and similarity matrices" HOMEPAGE="http://www.genome.ad.jp/aaindex" @@ -12,32 +12,36 @@ SRC_URI="ftp://ftp.genome.ad.jp/pub/db/genomenet/${PN}/${PN}.doc LICENSE="public-domain" SLOT="0" KEYWORDS="x86 ~ppc ppc-macos" -IUSE="no-emboss no-rawdb" +IUSE="emboss minimal" +# Minimal build keeps only the indexed files (if applicable) and the documentation. +# The non-indexed database is not installed. S=${WORKDIR} src_unpack() { + echo einfo "No archive to unpack." + echo } src_compile() { - # Index the database for use with emboss if emboss is installed and - # the user did not explicitly request not to index the database. - if [ -e /usr/bin/aaindexextract ] && ! use no-emboss; then + if use emboss; then mkdir AAINDEX + echo einfo "Indexing AAindex for usage with EMBOSS." EMBOSS_DATA=. aaindexextract -auto -infile ${DISTDIR}/${PN}1 || die \ "Indexing AAindex failed." + echo fi } src_install() { - if ! use no-rawdb; then + if ! use minimal; then insinto /usr/share/${PN} doins ${DISTDIR}/{${PN}{1,2},list_of_{matrices,indices}} fi dodoc ${DISTDIR}/${PN}.doc - if [ -e /usr/bin/aaindexextract ] && ! use no-emboss; then + if use emboss; then insinto /usr/share/EMBOSS/data/AAINDEX doins AAINDEX/* fi |