diff options
| -rw-r--r-- | sci-chemistry/pymol-apbs-plugin/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p26-r1.ebuild | 56 |
2 files changed, 63 insertions, 1 deletions
diff --git a/sci-chemistry/pymol-apbs-plugin/ChangeLog b/sci-chemistry/pymol-apbs-plugin/ChangeLog index ee80eea0b1dc..87a011009289 100644 --- a/sci-chemistry/pymol-apbs-plugin/ChangeLog +++ b/sci-chemistry/pymol-apbs-plugin/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-chemistry/pymol-apbs-plugin # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-apbs-plugin/ChangeLog,v 1.12 2014/07/10 09:29:13 nimiux Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-apbs-plugin/ChangeLog,v 1.13 2014/07/22 09:51:30 jlec Exp $ + +*pymol-apbs-plugin-2.1_p26-r1 (22 Jul 2014) + + 22 Jul 2014; Justin Lecher <jlec@gentoo.org> + +pymol-apbs-plugin-2.1_p26-r1.ebuild: + Fix double prefix 10 Jul 2014; Chema Alonso <nimiux@gentoo.org> pymol-apbs-plugin-2.1_p26.ebuild: diff --git a/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p26-r1.ebuild b/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p26-r1.ebuild new file mode 100644 index 000000000000..9098926397c5 --- /dev/null +++ b/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p26-r1.ebuild @@ -0,0 +1,56 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-apbs-plugin/pymol-apbs-plugin-2.1_p26-r1.ebuild,v 1.1 2014/07/22 09:51:30 jlec Exp $ + +EAPI=5 + +PYTHON_COMPAT=( python2_7 ) + +inherit eutils python-r1 + +MY_PV="${PV##*_p}" + +DESCRIPTION="APBS plugin for pymol" +HOMEPAGE="http://sourceforge.net/projects/pymolapbsplugin/" +SRC_URI="http://sourceforge.net/p/pymolapbsplugin/code/${MY_PV}/tree/trunk/src/apbsplugin.py?format=raw -> ${P}.py" + +SLOT="0" +KEYWORDS="amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +LICENSE="pymol" +IUSE="" + +REQUIRED_USE="${PYTHON_REQUIRED_USE}" + +RDEPEND=" + ${PYTHON_DEPS} + sci-chemistry/apbs + sci-chemistry/pdb2pqr + !<sci-chemistry/pymol-1.2.2-r1" +DEPEND="${RDEPEND}" + +src_unpack() { + mkdir "${S}" + cp "${DISTDIR}"/${P}.py "${S}"/ +} + +src_prepare() { + epatch "${FILESDIR}"/${P}-tcltk8.6.patch + python_copy_sources +} + +src_install() { + installation() { + cd "${BUILD_DIR}" || die + sed \ + -e "s:^APBS_BINARY_LOCATION.*:APBS_BINARY_LOCATION = \"${EPREFIX}/usr/bin/apbs\":g" \ + -e "s:^APBS_PSIZE_LOCATION.*:APBS_PSIZE_LOCATION = \"$(python_get_sitedir)/pdb2pqr/src/\":g" \ + -e "s:^APBS_PDB2PQR_LOCATION.*:APBS_PDB2PQR_LOCATION = \"$(python_get_sitedir)/pdb2pqr/\":g" \ + -e "s:^TEMPORARY_FILE_DIR.*:TEMPORARY_FILE_DIR = \"./\":g" \ + ${P}.py > apbs_tools.py || die + + python_moduleinto pmg_tk/startup + python_domodule apbs_tools.py + python_optimize + } + python_parallel_foreach_impl installation +} |