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author | Markus Dittrich <markusle@gentoo.org> | 2007-10-05 14:01:39 +0000 |
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committer | Markus Dittrich <markusle@gentoo.org> | 2007-10-05 14:01:39 +0000 |
commit | d1180ba24047fd570d983fad3a5d29a62e411a58 (patch) | |
tree | 1abd06743935714a3b4b64794dd2d6da5df8e71a /sci-libs | |
parent | DRDB package splitted in drbd + drbd-kernel, conversion to linux-mod. (diff) | |
download | gentoo-2-d1180ba24047fd570d983fad3a5d29a62e411a58.tar.gz gentoo-2-d1180ba24047fd570d983fad3a5d29a62e411a58.tar.bz2 gentoo-2-d1180ba24047fd570d983fad3a5d29a62e411a58.zip |
New revision with patch to fix fftw problem (see bug #194708).
(Portage version: 2.1.3.11)
Diffstat (limited to 'sci-libs')
-rw-r--r-- | sci-libs/scipy/ChangeLog | 9 | ||||
-rw-r--r-- | sci-libs/scipy/files/digest-scipy-0.6.0-r1 | 3 | ||||
-rw-r--r-- | sci-libs/scipy/files/scipy-0.6.0-fftw-fix.patch | 12 | ||||
-rw-r--r-- | sci-libs/scipy/scipy-0.6.0-r1.ebuild | 127 |
4 files changed, 150 insertions, 1 deletions
diff --git a/sci-libs/scipy/ChangeLog b/sci-libs/scipy/ChangeLog index a3adfd7d15aa..12845b755b69 100644 --- a/sci-libs/scipy/ChangeLog +++ b/sci-libs/scipy/ChangeLog @@ -1,6 +1,13 @@ # ChangeLog for sci-libs/scipy # Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/scipy/ChangeLog,v 1.23 2007/09/25 21:54:57 bicatali Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-libs/scipy/ChangeLog,v 1.24 2007/10/05 14:01:38 markusle Exp $ + +*scipy-0.6.0-r1 (05 Oct 2007) + + 05 Oct 2007; Markus Dittrich <markusle@gentoo.org> + +files/scipy-0.6.0-fftw-fix.patch, +scipy-0.6.0-r1.ebuild: + New revision with patch to fix fftw problem (see bug #194708). + Thanks much to David Heavens <david.heavens@gmail.com> for his patch. *scipy-0.6.0 (25 Sep 2007) diff --git a/sci-libs/scipy/files/digest-scipy-0.6.0-r1 b/sci-libs/scipy/files/digest-scipy-0.6.0-r1 new file mode 100644 index 000000000000..aa28d16fa675 --- /dev/null +++ b/sci-libs/scipy/files/digest-scipy-0.6.0-r1 @@ -0,0 +1,3 @@ +MD5 417adf3bfe03f4c23c9fb265018e545c scipy-0.6.0.tar.gz 6572954 +RMD160 391f2067f7dcc133e7e8622df93a2a0cd5ebbe5b scipy-0.6.0.tar.gz 6572954 +SHA256 5f70390963fb4e3ae8cf5effa301c160ef68c791098e2ea95b99380e298eac4f scipy-0.6.0.tar.gz 6572954 diff --git a/sci-libs/scipy/files/scipy-0.6.0-fftw-fix.patch b/sci-libs/scipy/files/scipy-0.6.0-fftw-fix.patch new file mode 100644 index 000000000000..8db84dd8dcdd --- /dev/null +++ b/sci-libs/scipy/files/scipy-0.6.0-fftw-fix.patch @@ -0,0 +1,12 @@ +diff -Naur scipy-0.6.0/scipy/fftpack/src/zfftnd_fftw.c scipy-0.6.0-new/scipy/fftpack/src/zfftnd_fftw.c +--- scipy-0.6.0/scipy/fftpack/src/zfftnd_fftw.c 2007-09-22 03:56:38.000000000 -0400 ++++ scipy-0.6.0-new/scipy/fftpack/src/zfftnd_fftw.c 2007-10-05 09:20:19.000000000 -0400 +@@ -25,7 +25,7 @@ + free(caches_zfftnd_fftw[id].dims);, 10) + + +-extern void zfftnd_mkl(complex_double * inout, int rank, ++extern void zfftnd_fftw(complex_double * inout, int rank, + int *dims, int direction, int howmany, + int normalize) + { diff --git a/sci-libs/scipy/scipy-0.6.0-r1.ebuild b/sci-libs/scipy/scipy-0.6.0-r1.ebuild new file mode 100644 index 000000000000..eccfa7dd551b --- /dev/null +++ b/sci-libs/scipy/scipy-0.6.0-r1.ebuild @@ -0,0 +1,127 @@ +# Copyright 1999-2007 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-libs/scipy/scipy-0.6.0-r1.ebuild,v 1.1 2007/10/05 14:01:38 markusle Exp $ + +NEED_PYTHON=2.3 + +inherit eutils distutils fortran + +SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" +DESCRIPTION="Scientific algorithms library for Python" +HOMEPAGE="http://www.scipy.org/" +LICENSE="BSD" + +SLOT="0" + +IUSE="fftw umfpack sandbox" + +KEYWORDS="~amd64 ~ppc ~x86" + +DEPEND=">=dev-python/numpy-1.0.3.1 + virtual/lapack + fftw? ( =sci-libs/fftw-2.1* ) + umfpack? ( sci-libs/umfpack dev-lang/swig ) + sandbox? ( >=sci-libs/netcdf-3.6 x11-libs/libX11 )" + +RDEPEND=">=dev-python/numpy-1.0.3.1 + dev-python/imaging + virtual/lapack + fftw? ( =sci-libs/fftw-2.1* ) + umfpack? ( sci-libs/umfpack ) + sandbox? ( >=sci-libs/netcdf-3.6 x11-libs/libX11 )" + +# test still buggy on lapack with 2 failures on check_syevr +# (lapack float). check every version bump. +RESTRICT="test" + +DOCS="THANKS.txt DEVELOPERS.txt LATEST.txt TOCHANGE.txt FORMAT_GUIDELINES.txt" + +scipy_fortran_setup() { + FORTRAN="gfortran g77 ifc" + fortran_pkg_setup + local fc= + case ${FORTRANC} in + gfortran) fc=gnu95 ;; + g77) fc=gnu ;; + ifc|ifort) + if use ia64; then + fc=intele + elif use amd64; then + fc=intelem + else + fc=intel + fi + ;; + *) eerror "Unknown fortran compiler: ${FORTRANC}" + die "scipy_fortran_setup failed" ;; + esac + + # when fortran flags are set, pic is removed. + use amd64 && [[ -n ${FFLAGS} ]] && FFLAGS="${FFLAGS} -fPIC" + export SCIPY_FCONFIG="config_fc --fcompiler=${fc}" +} + +# see numpy ebuild about unsetting LDFLAGS +LDFLAGS_sav="${LDFLAGS}" +unset LDFLAGS + +pkg_setup() { + [[ -n ${LDFLAGS_sav} ]] && einfo "Ignoring LDFLAGS=${LDFLAGS_sav}" + if use umfpack && ! built_with_use dev-lang/swig python; then + eerror "With umfpack enabled you need" + eerror "dev-lang/swig with python enabled" + einfo "Please re-emerge swig with USE=python" + die "needs swig with python" + fi + # scipy automatically detects libraries by default + export FFTW=None FFTW3=None UMFPACK=None DJBFFT=None + use fftw && unset FFTW + use umfpack && unset UMFPACK + use sandbox && elog "Warning: using sandbox modules at your own risk!" + scipy_fortran_setup +} + +src_unpack() { + unpack ${A} + cd "${S}" + epatch "${FILESDIR}"/${P}-randomkit.patch + epatch "${FILESDIR}"/${P}-cdf.patch + epatch "${FILESDIR}"/${P}-fftw-fix.patch + + if use sandbox; then + cd scipy/sandbox + ls -1 */__init__.py \ + | sed -e 's:/__init__.py::' \ + | grep -v exmplpackage \ + > enabled_packages.txt \ + || die "sandbox listing failed" + fi +} + +src_compile() { + distutils_src_compile ${SCIPY_FCONFIG} +} + +src_test() { + "${python}" setup.py install \ + --home="${S}"/test \ + --no-compile \ + ${SCIPY_FCONFIG} || die "install test failed" + pushd "${S}"/test/lib*/python + PYTHONPATH=. "${python}" -c \ + "import scipy as s;import sys;sys.exit(s.test(10,3))" \ + 2>&1 | tee test.log + grep -q OK test.log || die "test failed" + popd + rm -rf test +} + +src_install() { + distutils_src_install ${SCIPY_FCONFIG} +} + +pkg_postinst() { + elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER" + elog "to your prefered image viewer if you don't like the default one. Ex:" + elog "\t echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc" +} |