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authorJustin Lecher <jlec@gentoo.org>2010-02-28 10:56:45 +0000
committerJustin Lecher <jlec@gentoo.org>2010-02-28 10:56:45 +0000
commit66e07a5e2c2c1912b77f264c9b7cf40a9174b571 (patch)
tree0e07720640a41d389e2ae4889995650fc135c68e /sci-chemistry
parentMoved psipred from sci-chemistry to sci-biology (diff)
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Moved psipred from sci-chemistry to sci-biology
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/psipred/files/2.6.1-path.patch34
1 files changed, 0 insertions, 34 deletions
diff --git a/sci-chemistry/psipred/files/2.6.1-path.patch b/sci-chemistry/psipred/files/2.6.1-path.patch
deleted file mode 100644
index 9b8d6b9fecfa..000000000000
--- a/sci-chemistry/psipred/files/2.6.1-path.patch
+++ /dev/null
@@ -1,34 +0,0 @@
---- runpsipred 2008-04-05 00:14:36.000000000 +0200
-+++ runpsipred.new 2009-04-09 12:40:46.376203036 +0200
-@@ -14,13 +14,13 @@
- set dbname = nr
-
- # Where the NCBI programs have been installed
--set ncbidir = /usr/local/bin
-+set ncbidir = @GENTOO_PORTAGE_EPREFIX@/usr/bin
-
- # Where the PSIPRED V2 programs have been installed
--set execdir = ./bin
-+set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin
-
- # Where the PSIPRED V2 data files have been installed
--set datadir = ./data
-+set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data
-
- set basename = $1:r
- set rootname = $basename:t
---- runpsipred_single 2008-04-05 00:14:38.000000000 +0200
-+++ runpsipred_single.new 2009-04-09 12:41:10.086067082 +0200
-@@ -10,10 +10,10 @@
- # NOTE: Script modified to be more cluster friendly (DTJ April 2008)
-
- # Where the PSIPRED V2 programs have been installed
--set execdir = ./bin
-+set execdir = @GENTOO_PORTAGE_EPREFIX@/usr/bin
-
- # Where the PSIPRED V2 data files have been installed
--set datadir = ./data
-+set datadir = @GENTOO_PORTAGE_EPREFIX@/usr/share/psipred/data
-
- set basename = $1:r
- set rootname = $basename:t