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authorJeffrey Gardner <je_fro@gentoo.org>2007-07-04 23:56:14 +0000
committerJeffrey Gardner <je_fro@gentoo.org>2007-07-04 23:56:14 +0000
commit1aad1e098f7448ee8bcca71e585317c391d4c0bc (patch)
tree851d29e61103a4995b0241dccf8292b9c77198fc /sci-chemistry/pymol
parentversion bump to rdiff-backup-1.1.11, bug #183076. remove old ebuilds. (diff)
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Removing obsolete ebuild/files.
(Portage version: 2.1.2.9)
Diffstat (limited to 'sci-chemistry/pymol')
-rw-r--r--sci-chemistry/pymol/ChangeLog6
-rw-r--r--sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r23
-rw-r--r--sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch57
-rw-r--r--sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild86
4 files changed, 5 insertions, 147 deletions
diff --git a/sci-chemistry/pymol/ChangeLog b/sci-chemistry/pymol/ChangeLog
index 909fd9b5ef14..38e802549967 100644
--- a/sci-chemistry/pymol/ChangeLog
+++ b/sci-chemistry/pymol/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/pymol
# Copyright 2002-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.32 2007/07/04 18:00:01 angelos Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.33 2007/07/04 23:56:14 je_fro Exp $
+
+ 04 Jul 2007; Jeff Gardner <je_fro@gentoo.org>
+ -files/pymol-0.99_rc6-data-path.patch, -pymol-0.99_rc6-r2.ebuild:
+ Removing unneeded files.
04 Jul 2007; Christoph Mende <angelos@gentoo.org> pymol-0.99_rc10.ebuild:
Stable on amd64 wrt bug #183879
diff --git a/sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r2 b/sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r2
deleted file mode 100644
index 3a462090ec4e..000000000000
--- a/sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r2
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 cb29385ab523f648d4db47a222b1d03e pymol-0_99rc6-src.tgz 4198816
-RMD160 e9dc568dd38fffd37f306adf7e7a109d81dd4477 pymol-0_99rc6-src.tgz 4198816
-SHA256 d56bebc1316fd3442c54dee5bc4b2979041943bf50a9b34b44839595fd1b9a59 pymol-0_99rc6-src.tgz 4198816
diff --git a/sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch b/sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch
deleted file mode 100644
index 2ecad7f21b5f..000000000000
--- a/sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch
+++ /dev/null
@@ -1,57 +0,0 @@
---- commanding.py.old 2006-03-15 21:10:36.000000000 -0500
-+++ commanding.py 2006-03-15 21:12:27.000000000 -0500
-@@ -121,7 +121,7 @@
- r = DEFAULT_ERROR
- mode = int(mode)
- if mode == 1: # just show PNG
-- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/splash.png")
-+ png_path = cmd.exp_path("$PYMOL_DATA/pymol/splash.png")
- if os.path.exists(png_path):
- cmd.do("_ cmd.load_png('%s',0,quiet=1)"%png_path)
- r = DEFAULT_SUCCESS
---- fitting.py.old 2006-03-15 21:14:01.000000000 -0500
-+++ fitting.py 2006-03-15 21:13:24.000000000 -0500
-@@ -61,7 +61,7 @@
- r = DEFAULT_ERROR
- source = selector.process(source)
- target = selector.process(target)
-- mfile = cmd.exp_path("$PYMOL_PATH/data/pymol/matrices/"+matrix)
-+ mfile = cmd.exp_path("$PYMOL_DATA/pymol/matrices/"+matrix)
- if object==None: object=''
- try:
- lock()
---- importing.py.old 2006-03-15 21:15:34.000000000 -0500
-+++ importing.py 2006-03-15 21:15:04.000000000 -0500
-@@ -176,7 +176,7 @@
- r = DEFAULT_ERROR
-
-
-- tables = { 'cmyk' : "$PYMOL_PATH/data/pymol/cmyk.png",
-+ tables = { 'cmyk' : "$PYMOL_DATA/pymol/cmyk.png",
- 'pymol' : 'pymol',
- 'rgb' : 'rgb' }
-
---- wizard/mutagenesis.py.old 2006-03-15 21:44:06.000000000 -0500
-+++ wizard/mutagenesis.py 2006-03-15 21:57:48.000000000 -0500
-@@ -35,8 +35,8 @@
-
- self.dep = default_dep
-
-- self.ind_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+
-- "/data/chempy/sidechains/sc_bb_ind.pkl")
-+ self.ind_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+
-+ "/chempy/sidechains/sc_bb_ind.pkl")
- self.load_library()
- self.status = 0 # 0 no selection, 1 mutagenizing
- self.bump_check = 1
-@@ -107,8 +107,8 @@
- def load_library(self):
- if self.dep == 'dep':
- if not hasattr(self,'dep_library'):
-- self.dep_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+
-- "/data/chempy/sidechains/sc_bb_dep.pkl")
-+ self.dep_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+
-+ "/chempy/sidechains/sc_bb_dep.pkl")
-
- def set_mode(self,mode):
- if mode in self.modes:
diff --git a/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild b/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild
deleted file mode 100644
index ea47b4796788..000000000000
--- a/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild
+++ /dev/null
@@ -1,86 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild,v 1.6 2007/06/01 17:34:49 nixnut Exp $
-
-inherit distutils eutils multilib
-
-MY_PV=${PV/_}
-MY_S_P="${PN}-${MY_PV}"
-MY_PV=${MY_PV/./_}
-MY_P="${PN}-${MY_PV}"
-
-DESCRIPTION="A Python-extensible molecular graphics system."
-HOMEPAGE="http://pymol.sourceforge.net/"
-SRC_URI="mirror://sourceforge/pymol/${MY_P}-src.tgz"
-
-LICENSE="PSF-2.2"
-IUSE=""
-SLOT="0"
-KEYWORDS="amd64 ppc x86"
-
-DEPEND="dev-lang/python
- dev-python/pmw
- dev-python/numeric
- dev-lang/tk
- media-libs/libpng
- sys-libs/zlib
- media-libs/glut"
-
-S="${WORKDIR}/${MY_S_P}"
-
-pkg_setup() {
- distutils_python_tkinter
-}
-
-src_unpack() {
- unpack ${A}
- cd "${S}"/modules/${PN}
- epatch "${FILESDIR}"/${P}-data-path.patch
- cd "${S}"
- # Turn off splash screen. Please do make a project contribution
- # if you are able though.
- [[ -n "$WANT_NOSPLASH" ]] && epatch "${FILESDIR}"/nosplash-gentoo.patch
-
- # Respect CFLAGS
- sed -i \
- -e "s:\(ext_comp_args=\).*:\1[]:g" \
- "${S}"/setup.py
-}
-
-src_install() {
- python_version
-
- distutils_src_install
- cd "${S}"
-
- #The following three lines probably do not do their jobs and should be
- #changed
- PYTHONPATH="${D}/usr/$(get_libdir)/site-packages" ${python} setup2.py
-
- # These environment variables should not go in the wrapper script, or else
- # it will be impossible to use the PyMOL libraries from Python.
-cat >> "${T}"/20pymol << EOF
-PYMOL_PATH=/usr/lib/python${PYVER}/site-packages/pymol
-PYMOL_DATA="/usr/share/pymol/data"
-PYMOL_SCRIPTS="/usr/share/pymol/scripts"
-EOF
-
- doenvd "${T}"/20pymol || die "Failed to install env.d file."
-
- # Make our own wrapper
-cat >> "${T}"/pymol << EOF
-#!/bin/sh
-${python} \${PYMOL_PATH}/__init__.py \$*
-EOF
-
- exeinto /usr/bin
- doexe "${T}"/pymol || die "Failed to install wrapper."
- dodoc DEVELOPERS CHANGES || die "Failed to install docs."
-
- mv examples "${D}"/usr/share/doc/${PF}/ || die "Failed moving docs."
-
- dodir /usr/share/pymol
- mv test "${D}"/usr/share/pymol/ || die "Failed moving test files."
- mv data "${D}"/usr/share/pymol/ || die "Failed moving data files."
- mv scripts "${D}"/usr/share/pymol/ || die "Failed moving scripts."
-}