Fixed wrongs SRC_URI and HOMEPAGE (see bug #195080). Also bumped to new version.

(Portage version: 2.1.3.12)

4 files changed, 44 insertions, 6 deletions

diff --git a/sci-biology/mafft/ChangeLog b/sci-biology/mafft/ChangeLog
index a39710e12af1..9685d6731076 100644
--- a/sci-biology/mafft/ChangeLog
+++ b/sci-biology/mafft/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/mafft
-# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mafft/ChangeLog,v 1.2 2006/11/09 14:52:49 dberkholz Exp $
+# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mafft/ChangeLog,v 1.3 2007/10/10 10:23:40 markusle Exp $
+
+  08 Oct 2007; Markus Dittrich <markusle@gentoo.org> mafft-5.861-r1.ebuild, +mafft-6.240.ebuild:
+  Fixed wrongs SRC_URI and HOMEPAGE (see bug #195080). Also bumped
+  package to the most recent version.
 
 *mafft-5.861-r1 (09 Nov 2006)
 
diff --git a/sci-biology/mafft/files/digest-mafft-6.240 b/sci-biology/mafft/files/digest-mafft-6.240
new file mode 100644
index 000000000000..945dc6042d8b
--- /dev/null
+++ b/sci-biology/mafft/files/digest-mafft-6.240
@@ -0,0 +1,3 @@
+MD5 e603c1dbef35913d46286d5b98b601a3 mafft-6.240-src.tgz 657197
+RMD160 1cb77af7a5a6b9ab818560d9626e746fb7a3b839 mafft-6.240-src.tgz 657197
+SHA256 d0183ab1d6a5e0d1132b95cb917fedb3b6dc16c38d3fde35d7140ecdca555e8f mafft-6.240-src.tgz 657197
diff --git a/sci-biology/mafft/mafft-5.861-r1.ebuild b/sci-biology/mafft/mafft-5.861-r1.ebuild
index 83312f64057b..fdf6396c96cb 100644
--- a/sci-biology/mafft/mafft-5.861-r1.ebuild
+++ b/sci-biology/mafft/mafft-5.861-r1.ebuild
@@ -1,12 +1,12 @@
-# Copyright 1999-2006 Gentoo Foundation
+# Copyright 1999-2007 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mafft/mafft-5.861-r1.ebuild,v 1.1 2006/11/09 14:52:49 dberkholz Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mafft/mafft-5.861-r1.ebuild,v 1.2 2007/10/10 10:23:40 markusle Exp $
 
 inherit toolchain-funcs multilib
 
 DESCRIPTION="Multiple sequence alignments using a variety of algorithms"
-HOMEPAGE="http://www.biophys.kyoto-u.ac.jp/~katoh/programs/align/mafft/"
-SRC_URI="http://www.biophys.kyoto-u.ac.jp/~katoh/programs/align/mafft/${P}-src.tgz"
+HOMEPAGE="http://align.bmr.kyushu-u.ac.jp/mafft/software/"
+SRC_URI="http://align.bmr.kyushu-u.ac.jp/mafft/software/${P}-src.tgz"
 LICENSE="free-noncomm"
 SLOT="0"
 KEYWORDS="~x86"
diff --git a/sci-biology/mafft/mafft-6.240.ebuild b/sci-biology/mafft/mafft-6.240.ebuild
new file mode 100644
index 000000000000..ed0f76d02d47
--- /dev/null
+++ b/sci-biology/mafft/mafft-6.240.ebuild
@@ -0,0 +1,31 @@
+# Copyright 1999-2007 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mafft/mafft-6.240.ebuild,v 1.1 2007/10/10 10:23:40 markusle Exp $
+
+inherit toolchain-funcs multilib
+
+DESCRIPTION="Multiple sequence alignments using a variety of algorithms"
+HOMEPAGE="http://align.bmr.kyushu-u.ac.jp/mafft/software/"
+SRC_URI="http://align.bmr.kyushu-u.ac.jp/mafft/software/${P}-src.tgz"
+LICENSE="free-noncomm"
+SLOT="0"
+KEYWORDS="~x86"
+IUSE=""
+RDEPEND=""
+DEPEND="${RDEPEND}"
+
+src_compile() {
+	cd src
+	emake \
+		PREFIX="/usr/$(get_libdir)/${PN}" \
+		CC="$(tc-getCC)" \
+		CFLAG="${CFLAGS}" \
+		|| die "make failed"
+}
+
+src_install() {
+	pushd src
+	emake PREFIX="${D}usr/$(get_libdir)/${PN}" install || die "install failed"
+	popd
+	dodoc readme
+}