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| author |   Olivier Fisette <ribosome@gentoo.org> | 2005-10-18 13:39:42 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2005-10-18 13:39:42 +0000 |
| commit | 7c83e2423d7bce21eda4bf7b9104c66d6219bfbd (patch) | |
| tree | f88bca80f292db488ce5106eb86de570e1208cb1 /sci-biology | |
| parent | Add missing patch (diff) | |
| download | gentoo-2-7c83e2423d7bce21eda4bf7b9104c66d6219bfbd.tar.gz gentoo-2-7c83e2423d7bce21eda4bf7b9104c66d6219bfbd.tar.bz2 gentoo-2-7c83e2423d7bce21eda4bf7b9104c66d6219bfbd.zip | |
New version
(Portage version: 2.0.51.22-r3)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/aaindex/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/aaindex/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/aaindex/aaindex-7.0.ebuild | 39 | ||||
| -rw-r--r-- | sci-biology/aaindex/files/digest-aaindex-7.0 | 1 |
4 files changed, 49 insertions, 2 deletions
diff --git a/sci-biology/aaindex/ChangeLog b/sci-biology/aaindex/ChangeLog index d09776390ae4..e73639c1fc2f 100644 --- a/sci-biology/aaindex/ChangeLog +++ b/sci-biology/aaindex/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/aaindex # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.8 2005/09/04 14:51:37 blubb Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/ChangeLog,v 1.9 2005/10/18 13:39:42 ribosome Exp $ + +*aaindex-7.0 (18 Oct 2005) + + 18 Oct 2005; Olivier Fisette <ribosome@gentoo.org> +aaindex-7.0.ebuild: + New version. 04 Sep 2005; Simon Stelling <blubb@gentoo.org> aaindex-6.0.ebuild: added ~amd64 keyword diff --git a/sci-biology/aaindex/Manifest b/sci-biology/aaindex/Manifest index 84ad4c792007..7e8e104832e6 100644 --- a/sci-biology/aaindex/Manifest +++ b/sci-biology/aaindex/Manifest @@ -1,4 +1,6 @@ -MD5 098113e3074ec63941de020648b214a0 ChangeLog 1495 MD5 3bc220ac778574c6b87960b9852955c7 aaindex-6.0.ebuild 1434 +MD5 9e0ac88b426600d4ccbc35e0210eda4f aaindex-7.0.ebuild 1129 +MD5 098113e3074ec63941de020648b214a0 ChangeLog 1495 MD5 d508af45f2137bf67613eb18d9f6f831 metadata.xml 1310 MD5 cd3e50367768bef809d98048504b43d6 files/digest-aaindex-6.0 278 +MD5 5ec69cfa775115b1de4b49fd85fcc7b9 files/digest-aaindex-7.0 63 diff --git a/sci-biology/aaindex/aaindex-7.0.ebuild b/sci-biology/aaindex/aaindex-7.0.ebuild new file mode 100644 index 000000000000..a8e1ef2dfeec --- /dev/null +++ b/sci-biology/aaindex/aaindex-7.0.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2005 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/aaindex/aaindex-7.0.ebuild,v 1.1 2005/10/18 13:39:42 ribosome Exp $ + +DESCRIPTION="Amino acid indices and similarity matrices" +LICENSE="public-domain" +HOMEPAGE="http://www.genome.ad.jp/aaindex" +SRC_URI="mirror://gentoo/${P}.tar.bz2" + +SLOT="0" +# Minimal build keeps only the indexed files (if applicable) and the +# documentation. The non-indexed database is not installed. +IUSE="emboss minimal" +KEYWORDS="~amd64 ~ppc ~ppc-macos ~ppc64 ~x86" + +DEPEND="emboss? ( sci-biology/emboss )" + +src_compile() { + if use emboss; then + mkdir AAINDEX + echo + einfo "Indexing AAindex for usage with EMBOSS." + EMBOSS_DATA="." aaindexextract -auto -infile ${PN}1 || die \ + "Indexing AAindex failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins ${PN}{1,2} || die "Failed to install raw database." + fi + dodoc ${PN}.doc + if use emboss; then + insinto /usr/share/EMBOSS/data/AAINDEX + doins AAINDEX/* || die "Failed to install EMBOSS data files." + fi +} diff --git a/sci-biology/aaindex/files/digest-aaindex-7.0 b/sci-biology/aaindex/files/digest-aaindex-7.0 new file mode 100644 index 000000000000..ea4877d325a6 --- /dev/null +++ b/sci-biology/aaindex/files/digest-aaindex-7.0 @@ -0,0 +1 @@ +MD5 5ab27d95b2a4f3756c539333c18ebd54 aaindex-7.0.tar.bz2 94056 |