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| author |   Justin Lecher <jlec@gentoo.org> | 2013-02-17 10:25:40 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2013-02-17 10:25:40 +0000 |
| commit | 7b8a92f2632b6da0f9aad6fd4ab04eaf2aed7618 (patch) | |
| tree | f4b9ea7ec6919b9a3dc58adc2c3942a917282f77 /sci-biology | |
| parent | sci-biology/bfast: Drop old; move to autotools-utils; install docs in right p... (diff) | |
| download | gentoo-2-7b8a92f2632b6da0f9aad6fd4ab04eaf2aed7618.tar.gz gentoo-2-7b8a92f2632b6da0f9aad6fd4ab04eaf2aed7618.tar.bz2 gentoo-2-7b8a92f2632b6da0f9aad6fd4ab04eaf2aed7618.zip | |
sci-biology/consed: Quote EPREFIX, thanks Martin Mokrejš for the patch
(Portage version: 2.2.0_alpha163/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/consed/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/consed/consed-19-r2.ebuild | 8 | ||||
| -rw-r--r-- | sci-biology/consed/metadata.xml | 10 |
3 files changed, 15 insertions, 11 deletions
diff --git a/sci-biology/consed/ChangeLog b/sci-biology/consed/ChangeLog index cb3825043f9a..6d0a75781465 100644 --- a/sci-biology/consed/ChangeLog +++ b/sci-biology/consed/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/consed -# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/ChangeLog,v 1.5 2012/10/24 19:30:07 ulm Exp $ +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/ChangeLog,v 1.6 2013/02/17 10:25:40 jlec Exp $ + + 17 Feb 2013; Justin Lecher <jlec@gentoo.org> consed-19-r2.ebuild, + metadata.xml: + Quote EPREFIX, thanks Martin Mokrejš for the patch 24 Oct 2012; Ulrich Müller <ulm@gentoo.org> consed-19-r1.ebuild, consed-19-r2.ebuild: diff --git a/sci-biology/consed/consed-19-r2.ebuild b/sci-biology/consed/consed-19-r2.ebuild index 8c6209f0f654..0db4b9cd64e9 100644 --- a/sci-biology/consed/consed-19-r2.ebuild +++ b/sci-biology/consed/consed-19-r2.ebuild @@ -1,6 +1,6 @@ -# Copyright 1999-2012 Gentoo Foundation +# Copyright 1999-2013 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/consed-19-r2.ebuild,v 1.3 2012/10/24 19:30:07 ulm Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/consed-19-r2.ebuild,v 1.4 2013/02/17 10:25:40 jlec Exp $ EAPI=3 @@ -41,7 +41,7 @@ src_prepare() { -e 's/ARCHIVES=/ARCHIVES=\n_ARCHIVES=/' \ -e 's/CFLGS=/CFLGS= ${CFLAGS} /' "${S}/makefile" || die sed -i -e 's/CFLAGS=/CFLAGS += /' "${S}"/misc/*/Makefile || die - sed -i 's!\($szPhredParameterFile =\).*!\1 $ENV{PHRED_PARAMETER_FILE} || "${EPREFIX}/usr/share/phred/phredpar.dat";!' "${S}/scripts/"* || die + sed -i 's!\($szPhredParameterFile =\).*!\1 $ENV{PHRED_PARAMETER_FILE} || "'${EPREFIX}'/usr/share/phred/phredpar.dat";!' "${S}/scripts/"* || die } src_compile() { @@ -60,7 +60,7 @@ src_install() { doins -r standard polyphred autofinish assembly_view 454_newbler \ align454reads align454reads_answer solexa_example \ solexa_example_answer selectRegions selectRegionsAnswer || die - echo 'CONSED_HOME=${EPREFIX}/usr' > "${S}/99consed" + echo 'CONSED_HOME='${EPREFIX}'/usr' > "${S}/99consed" doenvd "${S}/99consed" || die dodoc README.txt *_announcement.txt || die } diff --git a/sci-biology/consed/metadata.xml b/sci-biology/consed/metadata.xml index 3302123e5718..fc7c76942a10 100644 --- a/sci-biology/consed/metadata.xml +++ b/sci-biology/consed/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer> - <email>weaver@gentoo.org</email> - <name>Andrey Kislyuk</name> - </maintainer> - <herd>sci-biology</herd> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> </pkgmetadata> |