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authorOlivier Fisette <ribosome@gentoo.org>2005-08-21 22:10:11 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-08-21 22:10:11 +0000
commit3fbca9641403140b85e259f752efd77ad41707f9 (patch)
tree67298dd4687b9eaa8872fc2859136b2bee8d461e /sci-biology
parentFixed patch to resolve bug #103238. (diff)
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New version. Removed obsolete versions.
(Portage version: 2.0.51.22-r2)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/prosite/ChangeLog9
-rw-r--r--sci-biology/prosite/Manifest34
-rw-r--r--sci-biology/prosite/files/digest-prosite-18.461
-rw-r--r--sci-biology/prosite/files/digest-prosite-18.471
-rw-r--r--sci-biology/prosite/files/digest-prosite-18.481
-rw-r--r--sci-biology/prosite/files/digest-prosite-18.491
-rw-r--r--sci-biology/prosite/files/digest-prosite-19.81
-rw-r--r--sci-biology/prosite/prosite-18.47.ebuild39
-rw-r--r--sci-biology/prosite/prosite-18.48.ebuild39
-rw-r--r--sci-biology/prosite/prosite-18.49.ebuild39
-rw-r--r--sci-biology/prosite/prosite-19.8.ebuild (renamed from sci-biology/prosite/prosite-18.46.ebuild)16
11 files changed, 35 insertions, 146 deletions
diff --git a/sci-biology/prosite/ChangeLog b/sci-biology/prosite/ChangeLog
index 209e56706cfc..c17616a7c753 100644
--- a/sci-biology/prosite/ChangeLog
+++ b/sci-biology/prosite/ChangeLog
@@ -1,6 +1,13 @@
# ChangeLog for sci-biology/prosite
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/ChangeLog,v 1.38 2005/08/19 19:08:10 hansmi Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/ChangeLog,v 1.39 2005/08/21 22:10:11 ribosome Exp $
+
+*prosite-19.8 (21 Aug 2005)
+
+ 21 Aug 2005; Olivier Fisette <ribosome@gentoo.org> -prosite-18.46.ebuild,
+ -prosite-18.47.ebuild, -prosite-18.48.ebuild, -prosite-18.49.ebuild,
+ +prosite-19.8.ebuild:
+ New version. Removed obsolete versions.
19 Aug 2005; Michael Hanselmann <hansmi@gentoo.org> prosite-19.6.ebuild:
Stable on ppc.
diff --git a/sci-biology/prosite/Manifest b/sci-biology/prosite/Manifest
index dcb91e8aefa7..b1a2a6510584 100644
--- a/sci-biology/prosite/Manifest
+++ b/sci-biology/prosite/Manifest
@@ -1,26 +1,28 @@
-MD5 25947d4903c0e2f66ad15bbbab27e668 prosite-19.1.ebuild 1039
-MD5 7f0d001df1bc68a291d5f9040e11e5f4 prosite-19.0.ebuild 1039
-MD5 44636731ac3011de80a791aa0175078b prosite-19.6.ebuild 1066
-MD5 c3491603df7320e99c3e502a5b4fb4e0 prosite-19.4.ebuild 1067
-MD5 81b73af5f2f4778bea2dde0b55620129 metadata.xml 810
-MD5 02bc0968b48063f4836a4404e9c2bc69 ChangeLog 7109
+MD5 4c26ef640cfccdf551ad1145db9afe55 prosite-19.8.ebuild 1083
MD5 d2986afe43d91abe3b75dc221334260e prosite-19.3.ebuild 1038
MD5 d194be4f1b58314a77133579c04b7c0d prosite-18.49.ebuild 1047
+MD5 ac4f89e2ad280618b3ee279dcd122d53 prosite-19.5.ebuild 1067
+MD5 7f0d001df1bc68a291d5f9040e11e5f4 prosite-19.0.ebuild 1039
MD5 c5b63bddc1b2d5091c677a1896731ab6 prosite-18.46.ebuild 1040
-MD5 8c2596ff9bc14d7378f69decb4eea835 prosite-18.47.ebuild 1040
-MD5 8978769061dc85e43182b80977970cee prosite-19.2.ebuild 1040
MD5 4c26ef640cfccdf551ad1145db9afe55 prosite-19.7.ebuild 1083
+MD5 8978769061dc85e43182b80977970cee prosite-19.2.ebuild 1040
MD5 21ec37743deb83595ca84cdf73fb6941 prosite-18.48.ebuild 1039
-MD5 ac4f89e2ad280618b3ee279dcd122d53 prosite-19.5.ebuild 1067
+MD5 c3491603df7320e99c3e502a5b4fb4e0 prosite-19.4.ebuild 1067
+MD5 44636731ac3011de80a791aa0175078b prosite-19.6.ebuild 1066
+MD5 25947d4903c0e2f66ad15bbbab27e668 prosite-19.1.ebuild 1039
+MD5 02bc0968b48063f4836a4404e9c2bc69 ChangeLog 7109
+MD5 8c2596ff9bc14d7378f69decb4eea835 prosite-18.47.ebuild 1040
+MD5 81b73af5f2f4778bea2dde0b55620129 metadata.xml 810
+MD5 8fc0830677dbffb996fa90b60242cd3f files/digest-prosite-19.0 66
MD5 d72066bacab6a36b919ed316c7f07e9d files/digest-prosite-19.1 66
-MD5 f38080620ee2d4aa3a5d90677333aaa7 files/digest-prosite-19.4 66
-MD5 2ef5c1aa16d2ff83ebbe4adcf0c64106 files/digest-prosite-18.46 67
+MD5 0dc824216d383692ef3d8385fbbe73e6 files/digest-prosite-19.2 66
MD5 76968e49f62b653477fed4468d3e28a3 files/digest-prosite-19.3 66
+MD5 f38080620ee2d4aa3a5d90677333aaa7 files/digest-prosite-19.4 66
+MD5 2b749f41f38efaab6eeaf15792a8dfc9 files/digest-prosite-19.5 66
MD5 6115b87da3345f0ceeca4e571ba56b6e files/digest-prosite-19.6 66
-MD5 cc1b44147136d60779ab4d7a32168c6a files/digest-prosite-18.49 67
-MD5 8fc0830677dbffb996fa90b60242cd3f files/digest-prosite-19.0 66
-MD5 0d1be49768240c94d1c0bc7b6e6876bb files/digest-prosite-18.48 67
MD5 b47261a82083f3ad572a4e00c1af7612 files/digest-prosite-19.7 66
-MD5 0dc824216d383692ef3d8385fbbe73e6 files/digest-prosite-19.2 66
+MD5 e272bc892ed8cea81c1d930bc6d8c2a1 files/digest-prosite-19.8 66
+MD5 2ef5c1aa16d2ff83ebbe4adcf0c64106 files/digest-prosite-18.46 67
MD5 81e334271598624412d41cc8a7a75cbf files/digest-prosite-18.47 67
-MD5 2b749f41f38efaab6eeaf15792a8dfc9 files/digest-prosite-19.5 66
+MD5 0d1be49768240c94d1c0bc7b6e6876bb files/digest-prosite-18.48 67
+MD5 cc1b44147136d60779ab4d7a32168c6a files/digest-prosite-18.49 67
diff --git a/sci-biology/prosite/files/digest-prosite-18.46 b/sci-biology/prosite/files/digest-prosite-18.46
deleted file mode 100644
index d76940c00c0e..000000000000
--- a/sci-biology/prosite/files/digest-prosite-18.46
+++ /dev/null
@@ -1 +0,0 @@
-MD5 e0fc086171662c7a0fd7889f1f692254 prosite-18.46.tar.bz2 3192515
diff --git a/sci-biology/prosite/files/digest-prosite-18.47 b/sci-biology/prosite/files/digest-prosite-18.47
deleted file mode 100644
index 23779b2e1ae4..000000000000
--- a/sci-biology/prosite/files/digest-prosite-18.47
+++ /dev/null
@@ -1 +0,0 @@
-MD5 863ac8599819527fc7838cfbbdf29243 prosite-18.47.tar.bz2 3227747
diff --git a/sci-biology/prosite/files/digest-prosite-18.48 b/sci-biology/prosite/files/digest-prosite-18.48
deleted file mode 100644
index 5f5f2a29ab5c..000000000000
--- a/sci-biology/prosite/files/digest-prosite-18.48
+++ /dev/null
@@ -1 +0,0 @@
-MD5 a08d6d218c3b6195ce109b35fda8942f prosite-18.48.tar.bz2 3256457
diff --git a/sci-biology/prosite/files/digest-prosite-18.49 b/sci-biology/prosite/files/digest-prosite-18.49
deleted file mode 100644
index b78c8ec14582..000000000000
--- a/sci-biology/prosite/files/digest-prosite-18.49
+++ /dev/null
@@ -1 +0,0 @@
-MD5 88eb11c8d02bbb8fc8519fa031e7fb4e prosite-18.49.tar.bz2 3274365
diff --git a/sci-biology/prosite/files/digest-prosite-19.8 b/sci-biology/prosite/files/digest-prosite-19.8
new file mode 100644
index 000000000000..183991e82fb7
--- /dev/null
+++ b/sci-biology/prosite/files/digest-prosite-19.8
@@ -0,0 +1 @@
+MD5 ac95036326ccb903a70a09e8aafe8ec3 prosite-19.8.tar.bz2 3618765
diff --git a/sci-biology/prosite/prosite-18.47.ebuild b/sci-biology/prosite/prosite-18.47.ebuild
deleted file mode 100644
index cfe9fe270496..000000000000
--- a/sci-biology/prosite/prosite-18.47.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-18.47.ebuild,v 1.3 2005/04/27 17:32:03 j4rg0n Exp $
-
-DESCRIPTION="A protein families and domains database"
-HOMEPAGE="http://ca.expasy.org/prosite"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="swiss-prot"
-SLOT="0"
-KEYWORDS="x86 ~ppc ppc-macos"
-IUSE="emboss minimal"
-# Minimal build keeps only the indexed files (if applicable) and the documentation.
-# The non-indexed database is not installed.
-
-DEPEND="emboss? ( sci-biology/emboss )"
-
-src_compile() {
- if use emboss; then
- mkdir PROSITE
- echo
- einfo "Indexing PROSITE for usage with EMBOSS."
- EMBOSS_DATA="." prosextract -auto -infdat ${S} || die \
- "Indexing PROSITE failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins ${PN}.{doc,dat,lis}
- fi
- dodoc *.txt
- dohtml prosuser.htm
- if use emboss; then
- insinto /usr/share/EMBOSS/data/PROSITE
- doins PROSITE/*
- fi
-}
diff --git a/sci-biology/prosite/prosite-18.48.ebuild b/sci-biology/prosite/prosite-18.48.ebuild
deleted file mode 100644
index b8382319b715..000000000000
--- a/sci-biology/prosite/prosite-18.48.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-18.48.ebuild,v 1.4 2005/05/02 09:27:41 hansmi Exp $
-
-DESCRIPTION="A protein families and domains database"
-HOMEPAGE="http://ca.expasy.org/prosite"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="swiss-prot"
-SLOT="0"
-KEYWORDS="x86 ppc ppc-macos"
-IUSE="emboss minimal"
-# Minimal build keeps only the indexed files (if applicable) and the documentation.
-# The non-indexed database is not installed.
-
-DEPEND="emboss? ( sci-biology/emboss )"
-
-src_compile() {
- if use emboss; then
- mkdir PROSITE
- echo
- einfo "Indexing PROSITE for usage with EMBOSS."
- EMBOSS_DATA="." prosextract -auto -infdat ${S} || die \
- "Indexing PROSITE failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins ${PN}.{doc,dat,lis}
- fi
- dodoc *.txt
- dohtml prosuser.htm
- if use emboss; then
- insinto /usr/share/EMBOSS/data/PROSITE
- doins PROSITE/*
- fi
-}
diff --git a/sci-biology/prosite/prosite-18.49.ebuild b/sci-biology/prosite/prosite-18.49.ebuild
deleted file mode 100644
index 5a45ab81f754..000000000000
--- a/sci-biology/prosite/prosite-18.49.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-18.49.ebuild,v 1.4 2005/05/31 02:34:18 j4rg0n Exp $
-
-DESCRIPTION="A protein families and domains database"
-HOMEPAGE="http://ca.expasy.org/prosite"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="swiss-prot"
-SLOT="0"
-KEYWORDS="~ppc ppc-macos ~ppc64 x86"
-IUSE="emboss minimal"
-# Minimal build keeps only the indexed files (if applicable) and the documentation.
-# The non-indexed database is not installed.
-
-DEPEND="emboss? ( sci-biology/emboss )"
-
-src_compile() {
- if use emboss; then
- mkdir PROSITE
- echo
- einfo "Indexing PROSITE for usage with EMBOSS."
- EMBOSS_DATA="." prosextract -auto -infdat ${S} || die \
- "Indexing PROSITE failed."
- echo
- fi
-}
-
-src_install() {
- if ! use minimal; then
- insinto /usr/share/${PN}
- doins ${PN}.{doc,dat,lis}
- fi
- dodoc *.txt
- dohtml prosuser.htm
- if use emboss; then
- insinto /usr/share/EMBOSS/data/PROSITE
- doins PROSITE/*
- fi
-}
diff --git a/sci-biology/prosite/prosite-18.46.ebuild b/sci-biology/prosite/prosite-19.8.ebuild
index 8371f0f0d0b6..bb985162cf5c 100644
--- a/sci-biology/prosite/prosite-18.46.ebuild
+++ b/sci-biology/prosite/prosite-19.8.ebuild
@@ -1,25 +1,25 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-18.46.ebuild,v 1.3 2005/03/26 19:22:19 j4rg0n Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-19.8.ebuild,v 1.1 2005/08/21 22:10:11 ribosome Exp $
DESCRIPTION="A protein families and domains database"
HOMEPAGE="http://ca.expasy.org/prosite"
SRC_URI="mirror://gentoo/${P}.tar.bz2"
LICENSE="swiss-prot"
SLOT="0"
-KEYWORDS="x86 ~ppc ppc-macos"
+KEYWORDS="~x86 ~ppc ~ppc-macos ~ppc64"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
-DEPEND="emboss? ( sci-biology/emboss )"
+DEPEND="emboss? ( >=sci-biology/emboss-3.0.0 )"
src_compile() {
if use emboss; then
mkdir PROSITE
echo
einfo "Indexing PROSITE for usage with EMBOSS."
- EMBOSS_DATA="." prosextract -auto -infdat ${S} || die \
+ EMBOSS_DATA="." prosextract -auto -prositedir ${S} || die \
"Indexing PROSITE failed."
echo
fi
@@ -28,12 +28,12 @@ src_compile() {
src_install() {
if ! use minimal; then
insinto /usr/share/${PN}
- doins ${PN}.{doc,dat,lis}
+ doins ${PN}.{doc,dat,lis} || die
fi
- dodoc *.txt
- dohtml prosuser.htm
+ dodoc *.txt || die
+ dohtml *.htm || die
if use emboss; then
insinto /usr/share/EMBOSS/data/PROSITE
- doins PROSITE/*
+ doins PROSITE/* || die
fi
}