Build against the EMBOSS 2.10 source tree.

(Portage version: 2.0.51.19)

8 files changed, 46 insertions, 2 deletions

diff --git a/sci-biology/embassy-esim4/ChangeLog b/sci-biology/embassy-esim4/ChangeLog
index 8f90d3a3b07b..ee0e0b9c2833 100644
--- a/sci-biology/embassy-esim4/ChangeLog
+++ b/sci-biology/embassy-esim4/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/embassy-esim4
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.4 2005/03/02 23:32:31 j4rg0n Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.5 2005/03/25 01:03:38 ribosome Exp $
+
+*embassy-esim4-1.0.0-r1 (25 Mar 2005)
+
+  25 Mar 2005; Olivier Fisette <ribosome@gentoo.org>
+  +embassy-esim4-1.0.0-r1.ebuild:
+  Build against the EMBOSS 2.10 source tree.
 
   02 Mar 2005; Lina Pezzella <j4rg0n@gentoo.org> embassy-esim4-1.0.0.ebuild:
   Stable ppc-macos
diff --git a/sci-biology/embassy-esim4/Manifest b/sci-biology/embassy-esim4/Manifest
index e895e547ca4b..50b4bec92f8f 100644
--- a/sci-biology/embassy-esim4/Manifest
+++ b/sci-biology/embassy-esim4/Manifest
@@ -1,4 +1,6 @@
 MD5 7b0e2f23f6ea13de3267567eb348e1d0 embassy-esim4-1.0.0.ebuild 373
 MD5 fc612e8819c74e6bc67cf573b58cb7c1 ChangeLog 974
 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
+MD5 5b2d3363f79ab45ea313271670df194a embassy-esim4-1.0.0-r1.ebuild 376
 MD5 b87bf359afdf01a0ebe6eb9454ee5ff0 files/digest-embassy-esim4-1.0.0 129
+MD5 bff2e87b1ac98e3b0fd7717d80b367ea files/digest-embassy-esim4-1.0.0-r1 130
diff --git a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild
new file mode 100644
index 000000000000..c45859a3bc09
--- /dev/null
+++ b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild
@@ -0,0 +1,9 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r1.ebuild,v 1.1 2005/03/25 01:03:38 ribosome Exp $
+
+inherit embassy-2.10
+
+DESCRIPTION="EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA"
+
+KEYWORDS="~x86 ~ppc ~ppc-macos"
diff --git a/sci-biology/embassy-esim4/files/digest-embassy-esim4-1.0.0-r1 b/sci-biology/embassy-esim4/files/digest-embassy-esim4-1.0.0-r1
new file mode 100644
index 000000000000..bc516052d9d7
--- /dev/null
+++ b/sci-biology/embassy-esim4/files/digest-embassy-esim4-1.0.0-r1
@@ -0,0 +1,2 @@
+MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
+MD5 d00209b958a45a1ba7cb617950e3fa48 ESIM4-1.0.0.tar.gz 375473
diff --git a/sci-biology/embassy-hmmer/ChangeLog b/sci-biology/embassy-hmmer/ChangeLog
index 601d19bb9079..f97e95dda21a 100644
--- a/sci-biology/embassy-hmmer/ChangeLog
+++ b/sci-biology/embassy-hmmer/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/embassy-hmmer
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.4 2005/03/02 23:38:49 j4rg0n Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.5 2005/03/25 01:07:13 ribosome Exp $
+
+*embassy-hmmer-2.1.1-r1 (25 Mar 2005)
+
+  25 Mar 2005; Olivier Fisette <ribosome@gentoo.org>
+  +embassy-hmmer-2.1.1-r1.ebuild:
+  Build against the EMBOSS 2.10 source tree.
 
   02 Mar 2005; Lina Pezzella <j4rg0n@gentoo.org> embassy-hmmer-2.1.1.ebuild:
   Stable ppc-macos
diff --git a/sci-biology/embassy-hmmer/Manifest b/sci-biology/embassy-hmmer/Manifest
index 20c4005ff147..ffe1c777cc9f 100644
--- a/sci-biology/embassy-hmmer/Manifest
+++ b/sci-biology/embassy-hmmer/Manifest
@@ -1,4 +1,6 @@
 MD5 b82ba91fe26032574beb02db74a38c69 embassy-hmmer-2.1.1.ebuild 477
+MD5 6c13673c21a490d860c74fd3f77c7b18 embassy-hmmer-2.1.1-r1.ebuild 480
 MD5 ac399cd943dfe05eef6bd7c4271cd95c ChangeLog 973
 MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
 MD5 b7e391c2b88024ccda59423a5ed6598e files/digest-embassy-hmmer-2.1.1 129
+MD5 d0e21d2f6443e2dbd9ef1f6c6448b07c files/digest-embassy-hmmer-2.1.1-r1 130
diff --git a/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild b/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild
new file mode 100644
index 000000000000..a56694327adf
--- /dev/null
+++ b/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild
@@ -0,0 +1,15 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.1.1-r1.ebuild,v 1.1 2005/03/25 01:07:13 ribosome Exp $
+
+inherit embassy-2.10
+
+DESCRIPTION="EMBOSS integrated version of HMMER - Biological sequence analysis with profile HMMs"
+
+KEYWORDS="~x86 ~ppc ~ppc-macos"
+
+src_install() {
+	embassy_src_install
+	insinto /usr/include/emboss/hmmer
+	doins src/*.h
+}
diff --git a/sci-biology/embassy-hmmer/files/digest-embassy-hmmer-2.1.1-r1 b/sci-biology/embassy-hmmer/files/digest-embassy-hmmer-2.1.1-r1
new file mode 100644
index 000000000000..f42c406d302e
--- /dev/null
+++ b/sci-biology/embassy-hmmer/files/digest-embassy-hmmer-2.1.1-r1
@@ -0,0 +1,2 @@
+MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124
+MD5 e060f31a25074dd64a7885a85cbc15da HMMER-2.1.1.tar.gz 552322