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DEFINED_PHASES=configure prepare
DEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen:3 >=app-portage/elt-patches-20170317 !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
DESCRIPTION=Transcript assembly and differential expression/regulation for RNA-Seq
EAPI=6
HOMEPAGE=http://cufflinks.cbcb.umd.edu/
IUSE=debug
KEYWORDS=~amd64 ~x86
LICENSE=Artistic
RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen:3
SLOT=0
SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz
_eclass_exported_funcs=src_prepare:- src_configure:-
_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af
_md5_=c3b164a465e5b7593cdeb3bbf345f549
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