From c337e46391e9fbbc1e639f860cd7b3eb72bdb536 Mon Sep 17 00:00:00 2001
From: Sergey Popov <pinkbyte@gentoo.org>
Date: Mon, 19 Oct 2015 20:11:00 +0300
Subject: sci-biology/seqan: correct dependency on sci-biology/samtools

Seqan 1.3.1 does not compile with samtools greater than 0.1.19
Also it does not compile with GCC 4.9 or higher, so restrict this too

Gentoo-Bug: 514250

Package-Manager: portage-2.2.20
---
 sci-biology/seqan/seqan-1.3.1-r1.ebuild | 10 +++++++++-
 1 file changed, 9 insertions(+), 1 deletion(-)

(limited to 'sci-biology/seqan')

diff --git a/sci-biology/seqan/seqan-1.3.1-r1.ebuild b/sci-biology/seqan/seqan-1.3.1-r1.ebuild
index a74eac3ccfce..2bcb7f651f5b 100644
--- a/sci-biology/seqan/seqan-1.3.1-r1.ebuild
+++ b/sci-biology/seqan/seqan-1.3.1-r1.ebuild
@@ -20,11 +20,19 @@ IUSE=""
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 RDEPEND="${PYTHON_DEPS}
-	sci-biology/samtools"
+	~sci-biology/samtools-0.1.19"
 DEPEND="${RDEPEND}"
 
 S="${WORKDIR}"/${P}/cmake
 
+pkg_setup() {
+	if [[ ${MERGE_TYPE} != binary ]]; then
+		[[ $(gcc-major-version) -gt 4 ]] || \
+		( [[ $(gcc-major-version) -eq 4 && $(gcc-minor-version) -gt 8 ]] ) \
+		&& die "Sorry, but gcc 4.9 or higher is unsupported"
+	fi
+}
+
 src_prepare() {
 	append-cppflags -I"${EPREFIX}/usr/include/bam"
 	rm -rf "${S}"/../lib/samtools || die
-- 
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