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* sci-libs/gmsh: install also *.h and lib* filesFabio Rossi2022-01-032-1/+3
| | | | | | | | | The installation is conditional on the shared useflag Closes: https://github.com/gentoo/gentoo/pull/23092 Closes: https://bugs.gentoo.org/827278 Signed-off-by: Fabio Rossi <rossi.f@inwind.it> Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/proj: add 8.2.1Sam James2022-01-022-0/+65
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/proj: drop 8.0.1, 8.1.0-r1, 8.1.1Sam James2022-01-024-204/+0
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libdap: disable more network testsSam James2022-01-021-25/+17
| | | | | Closes: https://bugs.gentoo.org/830221 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fftw: Keyword 3.3.10 for ~m68kJames Le Cuirot2022-01-011-2/+2
| | | | | | The tests pass. Signed-off-by: James Le Cuirot <chewi@gentoo.org>
* sci-libs/symengine: Stabilize 0.8.1 x86, #830313Arthur Zamarin2021-12-301-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/symengine: Stabilize 0.8.1 amd64, #830313Arthur Zamarin2021-12-301-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/scikit-optimize: add version 0.9.0, enable py3.10Andrew Ammerlaan2021-12-292-0/+32
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/scikit-learn: add version 1.0.2Andrew Ammerlaan2021-12-292-0/+54
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/scikit-image: add version 0.19.1Andrew Ammerlaan2021-12-292-0/+50
| | | | | | Bug: https://bugs.gentoo.org/810269 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/lrslib: keyword 071b-r1 for ~riscvAlex Fan2021-12-291-1/+1
| | | | | Signed-off-by: Alex Fan <alex.fan.q@gmail.com> Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/bliss: keyword 0.77 for ~riscvAlex Fan2021-12-291-1/+1
| | | | | Signed-off-by: Alex Fan <alex.fan.q@gmail.com> Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/libdap: add 3.20.9Sam James2021-12-293-0/+87
| | | | | | | | We were a bit behind in Gentoo so hopefully the linked bug is fixed too. Seems fine for me. Closes: https://bugs.gentoo.org/638494 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/trilinos: depend on netcdf subslotSam James2021-12-281-7/+7
| | | | | | need to be rebuilt when its subslot changes Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/exodusii: depend on netcdf subslotSam James2021-12-281-4/+3
| | | | | Closes: https://bugs.gentoo.org/830190 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/netcdf: temporarily disable ENABLE_LIBXML2Sam James2021-12-281-1/+2
| | | | | | | It's not yet in a release, whoops. Closes: https://bugs.gentoo.org/830191 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/netcdf: fix subslotSam James2021-12-281-1/+2
| | | | | Closes: https://bugs.gentoo.org/830191 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/cartopy: Move some DEPENDS to RDEPENDSThomas Beierlein2021-12-281-0/+70
| | | | | | | | | See also: https://bugs.gentoo.org/830016 Tnx Sam for pointing it out. Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/indilib: Stabilize 1.9.3 amd64, #829332Sam James2021-12-281-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/scotch: Stabilize 6.1.0-r1 arm64, #818649Sam James2021-12-271-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/cartopy: Fix missing $PYTHON_USEDEPThomas Beierlein2021-12-271-1/+1
| | | | | | Closes: https://bugs.gentoo.org/830016 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/cartopy: Version bumpThomas Beierlein2021-12-262-0/+71
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/scotch: add 6.1.2Sam James2021-12-262-0/+175
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/scotch: enable threads by default in 6.1.1Sam James2021-12-261-1/+1
| | | | | | Tests need it and it seems reasonable to want them too. Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/flann: adjust patch referenceSam James2021-12-261-1/+1
| | | | | Bug: https://bugs.gentoo.org/827263 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/flann: fix pkgconfig file format (no semicolons)Sam James2021-12-262-1/+40
| | | | | | | | | | | | | | | Not sure why but a semicolon seems to have started appearing more recently, probably with a newer CMake version. Anyway, a problem from the past resurfaced (in a slightly different way, but same outcome). flann's malformed pkgconfig file was causing consumers to be underlinked against lz4 and libflann* (and usually fail to build). Closes: https://bugs.gentoo.org/827263 Closes: https://bugs.gentoo.org/829398 Bug: https://bugs.gentoo.org/681898 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/rocBLAS: drop trailing full stop from DESCRIPTIONSam James2021-12-261-1/+1
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/dmlc-core: drop trailing full stop from DESCRIPTIONSam James2021-12-261-1/+1
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/branca: drop trailing full stop from DESCRIPTIONSam James2021-12-261-1/+1
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/tensorflow: Remove broken 2.7.0-r1Jason Zaman2021-12-242-413/+0
| | | | | | | | | | | 2.7.0-r1 moved to C++17 but has several issues. Remove for now until it can be fixed. Bug: https://bugs.gentoo.org/829114 Bug: https://bugs.gentoo.org/829588 Bug: https://bugs.gentoo.org/829716 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/gdal: add 3.4.0Sam James2021-12-222-0/+324
| | | | | Closes: https://bugs.gentoo.org/829775 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: drop versionsSam James2021-12-227-1887/+0
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/ginkgo: fix automagic hwloc dependencySam James2021-12-212-4/+6
| | | | | | | | | | | | It'll also try to download it if it can't find it on the system, so a revbump is worth it just for that as on some platforms we don't have network-sandbox (nor do we require it be used by users, even though they definitely should use it). But mainly for the automagic dep. Closes: https://bugs.gentoo.org/811384 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/ginkgo: dep on dev-util/nvidia-cuda-toolkitDavid Seifert2021-12-201-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/dealii: dep on dev-util/nvidia-cuda-toolkitDavid Seifert2021-12-202-2/+2
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/tensorflow: update cuda depsDavid Seifert2021-12-201-4/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/openblas: add 0.3.19Sam James2021-12-192-0/+198
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/indilib: ppc stable wrt bug #829332Agostino Sarubbo2021-12-171-1/+1
| | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/indilib: Stabilize 1.9.3 ppc64, #829332Sam James2021-12-161-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libqalculate: drop 3.20.1-r1Jakov Smolić2021-12-162-75/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/libcifpp: Bump to 3.0.0Pacho Ramos2021-12-162-0/+33
| | | | | | Closes: https://bugs.gentoo.org/823914 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/libqalculate: stable 3.21.0 for sparc, bug #828935Rolf Eike Beer2021-12-161-1/+1
| | | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="sparc" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/bliss: New upstream releaseFrançois Bissey2021-12-153-0/+61
| | | | | | | | Closes: https://bugs.gentoo.org/829119 Closes: https://github.com/gentoo/gentoo/pull/23284 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: François René Pierre Bissey <frp.bissey@gmail.com> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/fftw: stable 3.3.10 for hppa, bug #821916Rolf Eike Beer2021-12-141-1/+1
| | | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="hppa" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/symengine: add version 0.8.1Andrew Ammerlaan2021-12-142-0/+87
| | | | | | Closes: https://bugs.gentoo.org/812194 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/vtk: bump to 9.1.0Bernd Waibel2021-12-142-0/+602
| | | | | | | | | Bug: https://bugs.gentoo.org/820593 Closes: https://bugs.gentoo.org/822780 Closes: https://bugs.gentoo.org/820521 Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/dealii: use < (upper bound) dep on BoostSam James2021-12-141-2/+1
| | | | | | | | Avoid confusing blockers. Bug: https://bugs.gentoo.org/820821 See: https://forums.gentoo.org/viewtopic-t-1146245.html Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libqalculate: ppc64 stable wrt bug #828935Agostino Sarubbo2021-12-131-1/+1
| | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/libqalculate: amd64 stable wrt bug #828935Agostino Sarubbo2021-12-131-1/+1
| | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/sundials: amd64 stable wrt bug #828934Agostino Sarubbo2021-12-131-1/+1
| | | | | | Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>