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* sci-libs/p4est: fix versionSam James2022-10-014-2/+2
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/blis: bump version to 0.9.0Zhang Zongyu2022-09-303-0/+129
| | | | | | | | | Closes: https://bugs.gentoo.org/693470 Closes: https://bugs.gentoo.org/841440 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Zhang Zongyu <zongyu@novazy.net> Closes: https://github.com/gentoo/gentoo/pull/27534 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/opencascade: drop 7.6.2-r1Bernd Waibel2022-09-272-173/+0
| | | | | | Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/27442 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/ceres-solver: Stabilize 2.1.0 amd64, #872566Jakov Smolić2022-09-261-1/+1
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/med: drop 4.1.0Bernd Waibel2022-09-262-112/+0
| | | | | | Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/27440 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/opencascade: Stabilize 7.6.3 amd64, #872644Joonas Niilola2022-09-251-1/+1
| | | | Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/med: Stabilize 4.1.1 amd64, #872638Joonas Niilola2022-09-251-1/+1
| | | | Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/tensorflow: add 2.10.0Jason Zaman2022-09-222-0/+438
| | | | Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/keras: add 2.10.0Jason Zaman2022-09-223-0/+413
| | | | Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/tensorflow-estimator: add 2.10Jason Zaman2022-09-222-0/+76
| | | | Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/rocSOLVER: clean redundant fileYiyang Wu2022-09-222-174/+1
| | | | | | | | Fixes QA warning Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/27394 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/miopen: drop 4.3.0Yiyang Wu2022-09-224-115/+0
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/miopen: shrink 5.1.3-gfx1031.patch to fix QA warningYiyang Wu2022-09-221-22/+0
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/miopen: bump to 5.1.3, switch to vanilla clang-14Yiyang Wu2022-09-228-1/+774
| | | | | | | | | | | | | | | | | | Comparing to 5.0.2, 5.1.3 also has: 1. corrected dependencies 2. compilation errors fixed for gcc-12 (although ROCm-5.1.3 on clang-14 is incompatible with gcc-12, the patch would be useful when using clang-15) 3. deprecation of clang-ocl 4. cmake_src_prepare moved to the front, because src_prepare needs BUILD_DIR 5. fix invalid metadata issue found by using vanilla clang 6. enable test on specific arch Closes: https://github.com/gentoo/gentoo/pull/27219 Bugs: https://github.com/ROCmSoftwarePlatform/MIOpen/issues/1731 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocSOLVER: add 5.1.3, using rocm.eclassYiyang Wu2022-09-223-0/+253
| | | | | | | require dev-libs/libfmt-8 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipBLAS: add 5.1.3, using rocm.eclassYiyang Wu2022-09-222-0/+45
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipSPARSE: add 5.1.3, using rocm.eclassYiyang Wu2022-09-222-0/+97
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipCUB: add 5.1.3, using rocm.eclassYiyang Wu2022-09-222-0/+72
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/hipFFT: add 5.1.3, using rocm.eclassYiyang Wu2022-09-223-0/+80
| | | | | | | | profiles/base: mask hipFFT's gfx906 amdgpu target, as the revdep of gfx906-masked sci-libs/rocFFT-5.1.3. Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocRAND: add 5.1.3, using rocm.eclassYiyang Wu2022-09-222-0/+79
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocThrust: add 5.1.3, using rocm.eclassYiyang Wu2022-09-222-0/+75
| | | | | | | | | No need to rebuilt rocThrust when hip upgrade because it is dynamically linked to libhipamd, while llvm SLOT does not matter because it is only used to produce GPU kernels, libclang and libLLVM does not linked in. Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocSPARSE: add 5.1.3, using rocm.eclass, enable py3.11Yiyang Wu2022-09-223-0/+146
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocPRIM: add 5.1.3, using rocm.eclassYiyang Wu2022-09-222-0/+75
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocFFT: add 5.1.3, use rocm.eclassYiyang Wu2022-09-224-0/+223
| | | | | | | | | | | | | profiles/base: mask rocFFT-5.1.3 gfx906 amdgpu target, because intolerable error found on Radeon VII. No need to rebuilt rocFFT when hip upgrade because librocfft is dynamically linked to libhipamd, while llvm SLOT does not matter because it is only used to produce GPU kernels, libclang and libLLVM does not linked in. Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocBLAS: add 5.1.3, using rocm.eclassYiyang Wu2022-09-222-0/+115
| | | | | | | | | | No need to rebuilt rocBLAS when hip upgrade because librocblas is dynamically linked to libhipamd, while llvm SLOT does not matter because it is only used to produce GPU kernels, libclang and libLLVM does not linked in. Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/metis: Keyword 5.1.0-r5 mips, #764023matoro2022-09-191-2/+2
| | | | | Closes: https://github.com/gentoo/gentoo/pull/27333 Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/fflas-ffpack: fix indentationSam James2022-09-141-1/+1
| | | | | Fixes: d12bc87963fe1b3fae352771cd590e9daad228f4 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/caffe2: use addpredict /dev/nvidiactl for CUDA version checkJames Beddek2022-09-141-0/+2
| | | | | | | Closes: https://bugs.gentoo.org/867706 Signed-off-by: James Beddek <telans@posteo.de> Closes: https://github.com/gentoo/gentoo/pull/27253 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/nlopt: new revision with subslot dependency on sci-math/octave.Michael Orlitzky2022-09-121-0/+111
| | | | | | | | With USE=octave, NLopt builds a *.oct interface using mkoctfile, and that requires a rebuild when Octave is upgraded. Closes: https://bugs.gentoo.org/869863 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/nlopt: drop 2.6.2-r1, 2.7.1Michael Orlitzky2022-09-123-207/+0
| | | | Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/gdal: add 3.5.2Sam James2022-09-122-0/+240
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fflas-ffpack: fix duplicate pkg_setupSam James2022-09-112-9/+5
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/symengine: drop 0.8.1-r2Sam James2022-09-112-92/+0
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/symengine: allow LLVM 14, 15Sam James2022-09-111-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* Backport critical fixes to sci-libs/avogadrolibsAritz Erkiaga2022-09-072-0/+82
| | | | | | | Signed-off-by: Aritz Erkiaga <aerkiaga3@gmail.com> Closes: https://bugs.gentoo.org/868132 Closes: https://github.com/gentoo/gentoo/pull/27128 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/avogadrolibs: add 1.97.0Andrew Ammerlaan2022-09-072-0/+95
| | | | | | | Bug: https://bugs.gentoo.org/832528 Bug: https://bugs.gentoo.org/712962 Bug: https://bugs.gentoo.org/868132 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/onnx: depend on protbuf slotAlfredo Tupone2022-09-051-1/+1
| | | | | | Closes: https://bugs.gentoo.org/868576 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/caffe2: support glog-0.5.0Alfredo Tupone2022-09-052-1/+31
| | | | | | Closes: https://bugs.gentoo.org/865681 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/miopen: remove stale boost lower boundsDavid Seifert2022-09-042-3/+3
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libcifpp: remove stale boost lower boundsDavid Seifert2022-09-042-2/+2
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/o2scl: remove boost slot depsDavid Seifert2022-09-041-2/+2
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/adolc: remove boost slot depsDavid Seifert2022-09-042-3/+3
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/ViSP: remove boost[threads(+)] usedepDavid Seifert2022-09-042-3/+3
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/pcl: remove boost[threads(+)] usedepDavid Seifert2022-09-044-4/+4
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libcifpp: remove boost[threads(+)] usedepDavid Seifert2022-09-042-3/+3
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/fcl: remove boost[threads(+)] usedepDavid Seifert2022-09-042-4/+4
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/coinor-cppad: remove boost[threads(+)] usedepDavid Seifert2022-09-041-2/+2
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/volk: add 2.5.1Rick Farina2022-09-022-0/+49
| | | | | | Signed-off-by: Rick Farina <zerochaos@gentoo.org> Remove stray pyc/pyo files Closes: https://bugs.gentoo.org/862990
* sci-libs/volk: drop 2.4.1Rick Farina2022-09-022-46/+0
| | | | Signed-off-by: Rick Farina <zerochaos@gentoo.org>
* sci-libs/fflas-ffpack: fix pkg-config libdir, update EAPI 7 -> 8Michael Orlitzky2022-09-022-0/+96
| | | | | | | Apply François Bissey's upstream patch in a new revision. Closes: https://bugs.gentoo.org/862747 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>