diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
183 files changed, 183 insertions, 183 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 index cf45b0fa563a..706b4e6b49c1 100644 --- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 +++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 @@ -10,5 +10,5 @@ RESTRICT=mirror SLOT=0 SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=bf78ab8abbdb34e4f7d5c8a0b4429c0f diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index 1549aa985c2d..b009ae3d862e 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -10,5 +10,5 @@ RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:webapp pkg_setup:webapp src_unpack:perl-module src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 webapp a76ebd3cb5649737496e8238992dd7ca +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 webapp a76ebd3cb5649737496e8238992dd7ca _md5_=bccaeef3292f6df307fc14fb5a2a74b2 diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 index 941a20c79a29..6693832f1f78 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 +++ b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virt SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.2.tar.gz -> abyss-2.0.2.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=3b173739bd4e2f9d61a49918b3b8bc05 diff --git a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 index 9b3c659d52fd..c3bb6cc0cac8 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 +++ b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 @@ -9,5 +9,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/vaal SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=89ad1ab9497c178e43302814589f5f26 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r3 b/metadata/md5-cache/sci-biology/amap-2.2-r3 index d19e10ac2ff1..abc92a918040 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r3 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r3 @@ -10,5 +10,5 @@ RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-opt-2 pkg_setup:java-pkg-opt-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-opt-2 be255db325e3af8fbf3506cf63998341 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-opt-2 be255db325e3af8fbf3506cf63998341 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6bd792e8b76c06ee993b88f83e48b907 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r3 b/metadata/md5-cache/sci-biology/amos-3.1.0-r3 index 95c8ddc7d5fc..2cdc9733ec31 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r3 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 _eclass_exported_funcs=pkg_setup:python-single-r1 src_prepare:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=df778f6981c64e06ab2354697c3fc4a6 diff --git a/metadata/md5-cache/sci-biology/arb-5.1-r1 b/metadata/md5-cache/sci-biology/arb-5.1-r1 index 38d0ab4b2680..cc6aba4b539b 100644 --- a/metadata/md5-cache/sci-biology/arb-5.1-r1 +++ b/metadata/md5-cache/sci-biology/arb-5.1-r1 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.1/arbsrc.tgz -> arb-5.1.tgz mirror://gentoo/arb-5.1-glibc2.10.patch.bz2 https://dev.gentoo.org/~jlec/arb-5.1-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=55cafcf3d37a81cfa2273ca02c35bb00 diff --git a/metadata/md5-cache/sci-biology/arb-5.2 b/metadata/md5-cache/sci-biology/arb-5.2 index f762e8e84366..a0a60b911737 100644 --- a/metadata/md5-cache/sci-biology/arb-5.2 +++ b/metadata/md5-cache/sci-biology/arb-5.2 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.2/arbsrc.tgz -> arb-5.2.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.2-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=f0ab0e2c5ca080655274968b7915db12 diff --git a/metadata/md5-cache/sci-biology/arb-5.3 b/metadata/md5-cache/sci-biology/arb-5.3 index ec0ea9997e2d..c09183a0210d 100644 --- a/metadata/md5-cache/sci-biology/arb-5.3 +++ b/metadata/md5-cache/sci-biology/arb-5.3 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.3/arbsrc.tgz -> arb-5.3.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.3-linker.patch.xz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=bf2908058bcd4bfbaa7c0eb481d7c999 diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r3 b/metadata/md5-cache/sci-biology/ariadne-1.3-r3 index db9549e18580..86136107aec3 100644 --- a/metadata/md5-cache/sci-biology/ariadne-1.3-r3 +++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r3 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1 SLOT=0 SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=a99266aecef97d81f48df25aa43fbb4a diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 7ff54d974ad8..e4aa2ac8e21c 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=5660f556708e8c3b5d43c9ef832e66ec diff --git a/metadata/md5-cache/sci-biology/bamtools-2.4.1 b/metadata/md5-cache/sci-biology/bamtools-2.4.1 index 3b6b47810c80..a366834997fc 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.4.1 +++ b/metadata/md5-cache/sci-biology/bamtools-2.4.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/jsoncpp-1.8.0 sys-libs/zlib SLOT=0 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.4.1.tar.gz -> bamtools-2.4.1.tar.gz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=d1565aa3d9a639f7316a0c8588ecfc41 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 index 200937727964..970987b0ac33 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-j SLOT=0 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/beast-mcmc-1.7.5.tar.xz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=ff6d5ad394902a1137f7b3a310e2da17 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-9999 b/metadata/md5-cache/sci-biology/beast-mcmc-9999 index e1676629ecd8..95dbd930d6fc 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-9999 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-9999 @@ -8,5 +8,5 @@ LICENSE=LGPL-3 RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-java/junit:4 dev-java/jebl:0 dev-java/matrix-toolkits-java dev-java/commons-math:2 dev-java/jdom-jaxen:1.0 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:subversion pkg_setup:java-pkg-2 src_unpack:subversion src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e subversion a5d5826a85609611f098c0553eb24cc1 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e subversion a5d5826a85609611f098c0553eb24cc1 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=8ad11964919894b7a04467aea903b1c3 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0 index 09f2e06f0a58..11f77b63e5e0 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.26.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz _eclass_exported_funcs=pkg_setup:python-any-r1 src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=76f5a1f39ff7b393994b8a22dc4a192f diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 76d07e60f371..9f027375525c 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=abc362f15c5107d96bedfb879ea0375f diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 index d2098b01b825..d1708ef53485 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=9731727dae2a2514bcaa486b0059272e diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4 index 66258a653fa5..254a5c4bf93c 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.1.4 +++ b/metadata/md5-cache/sci-biology/biopandas-0.1.4 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz _eclass_exported_funcs=src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=4bf8773b4c6c512c3e616bf999994904 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.1 b/metadata/md5-cache/sci-biology/biopandas-0.2.1 index 5c323f19d2ad..efa01546a3e7 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.1 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.1.tar.gz _eclass_exported_funcs=src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=50d773beb88c02a8cbddc153bb75a0e6 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index eabd7e8fc178..f29ac18308da 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -12,5 +12,5 @@ REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=be22a76392a6e5c121e4b6d388045faa diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1 index 97b3b96cc8f7..67202bbe753a 100644 --- a/metadata/md5-cache/sci-biology/bioperl-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1 @@ -9,5 +9,5 @@ PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-d RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=2f5a1a5be901fb9aa471a5694313f16c diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index 36ce71debe86..4757dc69bc4e 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=1929bfeb08b2fcef94d459af1afdd442 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 index ab4813fff95a..083f5e7e9453 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=8f167dd7c94de9ed0f8fa3bb689ac020 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index cccd7d01ff30..a4d43cef4b6e 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=cb366a6a0c6cf3c12320c2d6d3551abe diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 index 6d352d328265..2b9582dc683f 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=b2079f6491e945f3e9aed1677de8c755 diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index d63cd4fe5454..921ed6081c21 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=9caec4e5b47cbf306a1689903f2a018a diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 index 404066add953..c7cb61a939af 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 @@ -9,5 +9,5 @@ RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/ RESTRICT=test SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=f7b2d645e2b1e254f05dc0c7127e26df diff --git a/metadata/md5-cache/sci-biology/biopython-1.68 b/metadata/md5-cache/sci-biology/biopython-1.68 index 0148dcdd6134..bc8e20b9b404 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.68 +++ b/metadata/md5-cache/sci-biology/biopython-1.68 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_py SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.68.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=0435edc9aefff4e2ffb912314f75430a diff --git a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 index 5ef85f3ce0d5..21e4b3be5d5f 100644 --- a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 +++ b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( ruby_targets_ruby21 ) SLOT=0 SRC_URI=http://www.bioruby.org/archive/bioruby-1.4.3.0001.tar.gz _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem 9652a5d6e78586973d23226d8fd77713 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem 9652a5d6e78586973d23226d8fd77713 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=5c85b93179ee11b962ff0328399497f6 diff --git a/metadata/md5-cache/sci-biology/bioruby-9999 b/metadata/md5-cache/sci-biology/bioruby-9999 index 2f4b59d620a8..e38b4e63b968 100644 --- a/metadata/md5-cache/sci-biology/bioruby-9999 +++ b/metadata/md5-cache/sci-biology/bioruby-9999 @@ -9,5 +9,5 @@ RDEPEND=ruby_targets_ruby21? ( dev-ruby/libxml[ruby_targets_ruby21] ) ruby_targe REQUIRED_USE=|| ( ruby_targets_ruby21 ) SLOT=0 _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem 9652a5d6e78586973d23226d8fd77713 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem 9652a5d6e78586973d23226d8fd77713 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=62f85ead0efdc1239f23d00c9b8ec065 diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2 index d2ddd8789ea5..bf711dbb4230 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r2 +++ b/metadata/md5-cache/sci-biology/blat-34-r2 @@ -8,5 +8,5 @@ LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=d48361335699038107318f5ca57533e8 diff --git a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 index af16fac0869f..418b72045c4c 100644 --- a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 +++ b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-libs/gsl:= dev-libs/boost:= sci-biology/snpfile SLOT=0 SRC_URI=http://www.daimi.au.dk/~mailund/Blossoc/download/blossoc-1.4.0.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=2fe1853c7621b633d2ee794ef3176e3f diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2 b/metadata/md5-cache/sci-biology/bowtie-1.1.2 index 8857a27080bb..a21c15332895 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2 @@ -9,5 +9,5 @@ LICENSE=Artistic SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=d123eea345ef4aa6c2c174df53575eeb diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 index 8ae8172def70..b6cf21b01110 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=tbb? ( dev-cpp/tbb ) SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=069dc133bc01cabadeda1e327034b7a7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.6 b/metadata/md5-cache/sci-biology/bowtie-2.2.6 index ca2747f7e86e..2babdee63b32 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.6 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.6 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.6/bowtie2-2.2.6-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=9a4ea0d94d151da708192284a1117dd7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9 index e3be1041c342..652d524e23d3 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.9 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=46d87c867cd445707dc1913cf3dd7eb6 diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.12 b/metadata/md5-cache/sci-biology/bwa-0.7.12 index 7f7bd4b3803d..3964a55b2662 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.12 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.12 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.12.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=ae8e9d2f58c9bc5022e9e224c56d2e6d diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.15 b/metadata/md5-cache/sci-biology/bwa-0.7.15 index 7de12f7bf52d..9966650beefb 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.15 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.15 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.15.tar.bz2 _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=1e7706ac5539187e6a18ffb1b2167e2c diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 index 1bf05339d2ff..56564c92cc32 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=bbe0ae10275a73485487e08f19f4ac1b diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 index 29a821d4f842..beb48051a087 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=31d235d5645f367b8eb15e10358c7475 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 index 0735f56ab1cd..b6de1e7f495d 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=2e8f46674a2f0906f57ffd70a5ebb549 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 index a64d585868f1..4f15208ffa45 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=a497f56fb650c3a8ca539939429b6bfb diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 1c3c89de659f..1e94b47afa67 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -7,5 +7,5 @@ LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=5c8ba46cd87128b1ddae72e6ca3d07db diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 index 17f86227eb36..ab5f3eee4850 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 @@ -10,5 +10,5 @@ RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=9e376a1d2ae782d9495b0c6c318aa097 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 index 5439751362cc..e7e2307567fa 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz _eclass_exported_funcs=src_unpack:qt4-r2 src_prepare:- src_configure:qt4-r2 src_compile:qt4-r2 src_install:- -_eclasses_=base df2aa567b3f0595aae0d0923889f7631 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c qt4-r2 b7985a3197fbc3a22d059f19904e735b toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=base df2aa567b3f0595aae0d0923889f7631 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c qt4-r2 b7985a3197fbc3a22d059f19904e735b toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=8348b4854d048ec19d5706f2d0461a2c diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r2 b/metadata/md5-cache/sci-biology/clustalx-2.1-r2 index 37d163e45b50..d91752bbaa67 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r2 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r2 @@ -9,5 +9,5 @@ RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=660b3463bc17c65cb8772961e042a81c diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index 2fe1819183ee..89f4e8b71477 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -11,5 +11,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=d533d3bc63ad3989cce879478db9de97 diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 index a026830c85bc..c039950c658d 100644 --- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 +++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen: SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=4ad79d5b383bcb53a250a681604a4756 diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 index f71970b91acc..7d3f652405b3 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=aadd3cbbb875bbc0d53d08117691ad8e diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1 index 6dcfd050defc..8c9efa6ea2ca 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=97419777f320b8d18d7fe0c86a34d414 diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4 index 5eb095387bfe..0532c04ac137 100644 --- a/metadata/md5-cache/sci-biology/diya-1.0_rc4 +++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal SLOT=0 SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=5d4639d7c08c43e2c2208492508fd56c diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 index 80a7539ce9d5..fd539fedd767 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=dbee2f511488caf9eadadb20d043a2da diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 index 627e0efd4d30..518c431b17b0 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=4166ba28131fdf70907b31300aa4c08b diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 index 041a73a82082..3b3765af3f5c 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plp SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=ef491b452e56be12961f62b16961f4f1 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 index e8ea18ee4048..c72bcee8889f 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 index 56989eae97bd..c7d33711c8d2 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=9f8b2caa273f4ae3b0463e6de6782660 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 index da703293ca3a..117eaa59359c 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=920906439fbc5278460201b23a615736 diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 index 7f3fc2d1a2f1..742b349c5518 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-l SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:- src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=d82c7c44ec76fa5d6165769a73e5df9a diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 index 429b1ce053a7..76b9c39147f4 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=1b156bed7ea031aeb5464836dd987f18 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 index 664e8de878be..a4b5c1a4cd4a 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=83d02ae22d4e1864669639d9289cd112 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 index 638493e89288..388656c92de1 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=73b0c29964ea3506d18ef6b6c8df70e1 diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 index 7be3f8919d40..a71963eddc83 100644 --- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 +++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=b18db6d7a2159272c7b69d34a14dc9b5 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index e1ad431530c5..eb76d170441a 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-l SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=84df94b7c4b0f044de45cef524cbf453 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 index c0e6c681a89b..d076123fd4dc 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=00620d36fbf4790dc2ecfb240ba9816c diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 index e74ab61379b4..d948582eab46 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=4cb685046b5a39b624eb3467b815c2c4 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 index 44158a599820..adf8f7e2409f 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=634d624be78f958ed7fca02e7dc43bd4 diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 index a711f727b28f..ea40cfe12566 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=e50220ee11093554b589c1f9f53e7c09 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 index aaf09c1b42d1..1b66d4915b67 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:- src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=d257de40bcdb33c0735daac8a5f15fda diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 index 50b1c66ceed3..76c801423961 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 @@ -11,5 +11,5 @@ RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:emboss-r2 src_configure:emboss-r2 src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=99a47266a2a8f2fd0a874111491146e2 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1 b/metadata/md5-cache/sci-biology/eugene-4.1 index 51fd7902a1f9..fdd2fc898a5a 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1 @@ -10,5 +10,5 @@ RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1157/eugene-4.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=6f1638a54685839c739157c9f641b358 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index 3062651942d7..7ef2ff69006f 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -10,5 +10,5 @@ RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=8f5a68a22051f24d76cd43774022915b diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 index 8878b41f296b..4265c55aa3b0 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=2efd53d13e6f08e4144477038f41e4af diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1 index 4b1ff2a6c530..4423756a7771 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5-r1 +++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6d15a446bfc7659cceaabe3567001583 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index d96ff327c4e4..67b734305718 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sy SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=b71cdea630f32e2657b8152579eec606 diff --git a/metadata/md5-cache/sci-biology/fasta-35.4.10 b/metadata/md5-cache/sci-biology/fasta-35.4.10 index c2179d31f787..d2271074096b 100644 --- a/metadata/md5-cache/sci-biology/fasta-35.4.10 +++ b/metadata/md5-cache/sci-biology/fasta-35.4.10 @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta3/fasta-35.4.10.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=bc70246741c824a5b11b9e292d26c372 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index f38825efed5e..6272de30307e 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=7b46f81d2659e9120c49874e774b5ca0 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7 index 9422c6ade794..ae148a844a63 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.7 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=20d72299931c8f8e092006a9b668182c diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index 30233dca2955..00691efa115c 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=f2b648d93a4c0ca58285574958cde15a diff --git a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 index 15efc075c209..1f1f6a609dce 100644 --- a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 +++ b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 @@ -7,5 +7,5 @@ LICENSE=finchtv SLOT=0 SRC_URI=http://www.geospiza.com/finchtv/download/programs/linux/finchtv_1_3_1.tar.gz _eclass_exported_funcs=src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=08355830f28d1052c2ab527b82a8dd68 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 index ba296cb756df..46a1cfe7f034 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 @@ -9,5 +9,5 @@ RESTRICT=mirror bindist strip SLOT=0 SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.4/fahclient_7.4.4-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.4/fahclient_7.4.4-64bit-release.tar.bz2 ) _eclass_exported_funcs=pkg_preinst:- pkg_postrm:- pkg_postinst:- pkg_setup:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee user e4b567c44272a719fabf53f0f885d3f7 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 user e4b567c44272a719fabf53f0f885d3f7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=549f0f21c2d596dc98e902cadff8b39a diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4 index 959e45f57610..7d83dc5ffc52 100644 --- a/metadata/md5-cache/sci-biology/gatk-2.4 +++ b/metadata/md5-cache/sci-biology/gatk-2.4 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:vcs-snapshot src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee vcs-snapshot 03289f51c769cf409d200d2d628cdd6e versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 vcs-snapshot 03289f51c769cf409d200d2d628cdd6e versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=8afea474ed6c1f4ad5ac6d6a18c49542 diff --git a/metadata/md5-cache/sci-biology/gatk-9999 b/metadata/md5-cache/sci-biology/gatk-9999 index 78ba8b2dbf73..ea2540eb80e7 100644 --- a/metadata/md5-cache/sci-biology/gatk-9999 +++ b/metadata/md5-cache/sci-biology/gatk-9999 @@ -8,5 +8,5 @@ LICENSE=MIT RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:git-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=df4fa840e567320d0f100f0073200f23 diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index 64e3a5d7378c..97895951eb8d 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=e28918ff8ca46c8b8254e4e36f8d0bcf diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 index fc37c4b64ee5..57575359d463 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 +++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=fda3f095f34da47d12e170b3c40dfd67 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index aae1bbcba23e..cd9ae75068c4 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=http://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=1a77df881e0fba38094c344e97b529a5 diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index 185a66ed819a..d1a03a280e70 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=addae30e588a0c7a05baea53d553af0f diff --git a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 index a92aabedbac0..aa3778dbad0d 100644 --- a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 +++ b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 @@ -7,5 +7,5 @@ LICENSE=gmap SLOT=0 SRC_URI=http://research-pub.gene.com/gmap/src/gmap-gsnap-2015-12-31.v5.tar.gz _eclass_exported_funcs=- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=398e7f0670f5bd07e45f2780d7fe03cf diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 index 786dcc71d012..5b010487c915 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=03afdad422e8ac673016b7bbfd574c75 diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 index 0d2f643c7a35..e55418a06784 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=5d560004d41472d184dd71e7ea06a04c diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 index 59bcc3f332d3..a6f905b52d03 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=62b1fc794a90a87e0f80ab795108ee3c diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 index d24181106557..f43731f4468d 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=2599766d541e65f4acfb94c4fa4e974e diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 index f1f33ada7c5e..b5771a227cf3 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=416e64f4b9f8268c7d795c45e35bacf7 diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index a6173dd3ec25..c19541011c5e 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=ce77e1e27bd52fed2fd2af52744d6288 diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2 index e92b6fb3c543..1927ff230ff8 100644 --- a/metadata/md5-cache/sci-biology/kalign-2.03-r2 +++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=175d26382226c7bed2b44be485b01d01 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r3 b/metadata/md5-cache/sci-biology/lagan-2.0-r3 index d826feea9b23..b326ecdd755f 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r3 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r3 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=c9dbddd6a22f2e20ff25d0aa1e6f4280 diff --git a/metadata/md5-cache/sci-biology/last-230 b/metadata/md5-cache/sci-biology/last-230 index fa639a596c66..613980346794 100644 --- a/metadata/md5-cache/sci-biology/last-230 +++ b/metadata/md5-cache/sci-biology/last-230 @@ -8,5 +8,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://last.cbrc.jp/archive/last-230.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=5da658e6779591b0d1b9ad3413a0e7b2 diff --git a/metadata/md5-cache/sci-biology/last-299-r1 b/metadata/md5-cache/sci-biology/last-299-r1 index a8e3005d2433..b5d40b63741c 100644 --- a/metadata/md5-cache/sci-biology/last-299-r1 +++ b/metadata/md5-cache/sci-biology/last-299-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://last.cbrc.jp/last-299.zip _eclass_exported_funcs=pkg_setup:python-single-r1 src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=ec5206661373a6ef6ad77450dfbdb915 diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050 index ab49ac65d0df..e597aa22b713 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.050 +++ b/metadata/md5-cache/sci-biology/mafft-7.050 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=10435da51da43a9bd92e9e337fb92445 diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215 index cd311a9212ef..3d2663e79bb8 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.215 +++ b/metadata/md5-cache/sci-biology/mafft-7.215 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=26a81f4b6b0ff69fbc3eba8869681491 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index 7484828b5938..edcbfee45912 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=4701ed0cbf5fff28c6de7c8b01e134af diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 index bb954a4b3092..025f10fa2497 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=39ffb0025210075a8d7d7f6f81f8da56 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 index 5fc3ec0f0e4a..b2614175c5b6 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 @@ -9,5 +9,5 @@ RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=dee50558d10e75ff9e96f4c3f177c55f diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312 index 87cb54060269..540049c9fad4 100644 --- a/metadata/md5-cache/sci-biology/mcl-08.312 +++ b/metadata/md5-cache/sci-biology/mcl-08.312 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135 index fe1de41e6d17..a8ab6989053a 100644 --- a/metadata/md5-cache/sci-biology/mcl-12.135 +++ b/metadata/md5-cache/sci-biology/mcl-12.135 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 6a06e0e57260..3c6b9e3abc35 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=3429c68609b6c70e047d577379f68f97 diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 index fa7a610c700f..94508efe94e2 100644 --- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 +++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=a4080439675628436c06de8db9f59c6e diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2 index c2ca96b61403..5600bc30340a 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost[threads] dev-util/google-perftools SLOT=0 SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=4e9fc8a550640febbc0b71544c16618c diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index f3cc6452a824..9bdb56e87256 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz _eclass_exported_funcs=src_unpack:vcs-snapshot src_configure:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee vcs-snapshot 03289f51c769cf409d200d2d628cdd6e +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 vcs-snapshot 03289f51c769cf409d200d2d628cdd6e _md5_=e8bd620c581af022566733e65d479626 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 46fa0949d3b7..f364610af76e 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=http://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=abcc03749068210ba5c44ba0b4a85e27 diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 index 4ae3d19e17e2..f0e7e967878a 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=a082c9b1f1b5f9fa9b85e23eb7009a6d diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 9354a7805f2e..c3f42758cbfd 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=a944448f568e57bb9f221cd1f437ab09 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23 index f36bae7c676e..6ebafc9f54ab 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23 +++ b/metadata/md5-cache/sci-biology/mummer-3.23 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=c256f298b416306c1be7005e7877f7b9 diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 4b6515361243..540ec0dc775b 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=500ff424aff8c56744362bc87a3ff285 diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 index bb2d74b24a47..c3b460cbc30f 100644 --- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 +++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 @@ -10,5 +10,5 @@ RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontc SLOT=0 SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=770169ddfbcde7c5fbe57bff9b10ca14 diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2 index 9faff5395cce..36cfe9a9dc80 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3-r2 +++ b/metadata/md5-cache/sci-biology/njplot-2.3-r2 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=c70b49c7f5e1a92f5169df372f9638c6 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1 index fb35a04dd356..4319c6bd71dd 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=b0df20d47905df6a290c5fe2f79fd48b diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1 index d1d24a507d9d..3d6c25452df1 100644 --- a/metadata/md5-cache/sci-biology/paml-4.4c-r1 +++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1 @@ -7,5 +7,5 @@ LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=c46d709378282d4ccbb567aaa00ee01a diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 index 87b231efe5ae..c30482c2e2bb 100644 --- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 +++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 @@ -9,5 +9,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=phrap-1.080812-distrib.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=e72f3e08accb23ebf55562689dad5f46 diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1 index 5152ad5676d7..9794037adec9 100644 --- a/metadata/md5-cache/sci-biology/phred-071220-r1 +++ b/metadata/md5-cache/sci-biology/phred-071220-r1 @@ -8,5 +8,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=phred-dist-071220.b-acd.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=92065ca72fd55796ea38e3d5ae9ee8b8 diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1 index 70fe3f7c4063..d52c940be81c 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.69-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=e38b117238f85d8861b4bb7d82c617d2 diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1 index 63e50fb46908..342f32ed55fd 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.696-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=974f8dc4ee6875c5d84eba7b501bf02a diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 index b010df873eef..24a5ac5a7bc8 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=fcca6fb4f9e88f5eb6a63a3ee0c79df7 diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index ee8e3902efaf..9d9c970e09be 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:java-pkg-2 src_configure:java-ant-2 src_compile:java-pkg-2 src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=09627e6bb74ee9997324bde01a56bcbd diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1 index 56310188bfca..1f2901428329 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r1 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r1 @@ -8,5 +8,5 @@ RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=7b5a6d618aac08240cf165a04509c319 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 index f44a77f98f9d..89603267d360 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=d9f7901d3776c424cfb93782cc6ddafa diff --git a/metadata/md5-cache/sci-biology/plink-1.07-r1 b/metadata/md5-cache/sci-biology/plink-1.07-r1 index 45c6a85be2bd..bef611732bd0 100644 --- a/metadata/md5-cache/sci-biology/plink-1.07-r1 +++ b/metadata/md5-cache/sci-biology/plink-1.07-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib lapack? ( virtual/lapack ) SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/plink/dist/plink-1.07-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=b659cc5ab8af123ceaf15f1349214345 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index 755e39aecac4..6a7fe2bf732e 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=570249dc23feeff7b47b3e81df358196 diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 28c48cb7f583..49a1394629e3 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=4f0b8d6c2192465644af4890a995d48a diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603 index a83395ef05bc..dfe8c639f616 100644 --- a/metadata/md5-cache/sci-biology/prank-140603 +++ b/metadata/md5-cache/sci-biology/prank-140603 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=17023476000980284365a9c0ed04a6f0 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.5 b/metadata/md5-cache/sci-biology/primer3-2.3.5 index 81d6998c4c88..968076eaef12 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.5 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.5 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.5/primer3-2.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=b7f3f26331b5241399cbf40ac9eeeabc diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.6 b/metadata/md5-cache/sci-biology/primer3-2.3.6 index 9347479af891..3224e8abd1fe 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.6 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.6/primer3-src-2.3.6.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=e95de8dec7345b06ff7fac5c6c009d53 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index f76a0600bda9..c5995fc2b2ea 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=8b3d4a5940e96102e289acad426724d9 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index 4be497620184..183b37a961ac 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=19a24bd3c543d599d5b3392e66b7022e diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3 index 0e52f4565e65..77e9d61cfa77 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz _eclass_exported_funcs=src_configure:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=9cea3bcc55e864076d7e4b542f657f96 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39 index 8d72b8cf22cf..83887f85b01e 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.39 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.39 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=8e866cc812e134cdc7a7837e5b60aa21 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40 index ee86bb52ab09..754b1ee32288 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.40 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.40 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=b641a6cfd444fa4b83d5963246948636 diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1 index b5cf3cf4f66a..f77d30d39874 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.2.1 +++ b/metadata/md5-cache/sci-biology/psipred-3.2.1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=bf7aa50ff789d669fe4846e0e41828d7 diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3 index 2ffb83a203e0..e371bde2b38e 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.3 +++ b/metadata/md5-cache/sci-biology/psipred-3.3 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=d719359ecbbd5c0825e93788cc4f0af1 diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4 index c51c007747ba..c6f958a9ff58 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.4 +++ b/metadata/md5-cache/sci-biology/psipred-3.4 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=671e20dbd509ebdd9e9c492e2c53b6a1 diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5 index 148d1f45339b..4658ac72eaf4 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.5 +++ b/metadata/md5-cache/sci-biology/psipred-3.5 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=671e20dbd509ebdd9e9c492e2c53b6a1 diff --git a/metadata/md5-cache/sci-biology/pysam-0.9.0 b/metadata/md5-cache/sci-biology/pysam-0.9.0 index 96d3fed2b019..a0f8bc9ecb13 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.9.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.9.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.9.0.tar.gz -> pysam-0.9.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:distutils-r1 src_compile:- src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=0f649b2f11f84f90b841d9b791afb9ea diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 index ecb217282127..44e345498384 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl sci-biology/hmmer SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=35f5a46d4490059eb478c8a8c7998ac5 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index 7ccbe61cc1f5..61340cd049d9 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=f2b8e0b4e5701d9b20bcbf9151c9b868 diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08 index 563290c0464d..1689113eca7d 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08 +++ b/metadata/md5-cache/sci-biology/recon-1.08 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=2ddd537d912c7c88b6f0b0d203a51613 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index cc4e25bfb1e0..783a548a8914 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=7aa6de8741afab9d848f4cbada44c7ad diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 index d1d1201af4b2..3b15d906972c 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=788c156d45287bef4f6aa876055bde4c diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 index f75fa0018e68..036fffae9c98 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-0.1.19.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=e1ccf59bd58eff379ed18ed6a93ebb35 diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 index ec4f74d90579..35879d58e04a 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=fa48f0b2be780a9264eb9d727ec53335 diff --git a/metadata/md5-cache/sci-biology/samtools-1.0 b/metadata/md5-cache/sci-biology/samtools-1.0 index 60c6afaeff4b..fa444b171904 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0 +++ b/metadata/md5-cache/sci-biology/samtools-1.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=7d366f23af02dfce6c9bf8b2621c8eae diff --git a/metadata/md5-cache/sci-biology/samtools-1.0-r1 b/metadata/md5-cache/sci-biology/samtools-1.0-r1 index 835c34ce84df..65aed7288237 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=3b6a998ba682aeecd6ccf3fad3f54608 diff --git a/metadata/md5-cache/sci-biology/samtools-1.1 b/metadata/md5-cache/sci-biology/samtools-1.1 index a1f59b765d8a..37cfcc33bdd9 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.1 +++ b/metadata/md5-cache/sci-biology/samtools-1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.1.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=91c3979d63f4f6aad688f77b35bee881 diff --git a/metadata/md5-cache/sci-biology/samtools-1.2 b/metadata/md5-cache/sci-biology/samtools-1.2 index fa07dbd9fa0c..052faac97aec 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.2 +++ b/metadata/md5-cache/sci-biology/samtools-1.2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.2.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=057b47f1a39735a5310b243f703a7e4c diff --git a/metadata/md5-cache/sci-biology/samtools-1.3-r1 b/metadata/md5-cache/sci-biology/samtools-1.3-r1 index 8c2966b96d54..d19285b5cab3 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.3-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.3-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.3.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=cf37f73f252597d9e20cd5b6bcd69b5e diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5 index b7731d93b58d..57858a3768c0 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.3.5 +++ b/metadata/md5-cache/sci-biology/seaview-4.3.5 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4 index f14d71edc761..bbb5abf25a85 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.5.4 +++ b/metadata/md5-cache/sci-biology/seaview-4.5.4 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6 index af6bb46ab04a..b67becc06cf8 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6 +++ b/metadata/md5-cache/sci-biology/seaview-4.6 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=1a6723f1ab0e67cc0d63dd54a902900f diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index adb2994b7d5e..00743acf27e7 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=b6c214312349c09a0fe901e8d0235a32 diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 index c769e0ee69c0..6d6ec17df78c 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_compile:- src_test:cmake-utils src_install:- -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=0a4cc55d3cd27897618671fdafc13e2f diff --git a/metadata/md5-cache/sci-biology/shrimp-2.0.1 b/metadata/md5-cache/sci-biology/shrimp-2.0.1 index 98742d81568f..775193ee9f96 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.0.1 +++ b/metadata/md5-cache/sci-biology/shrimp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/emboss !sci-mathematics/cado-nfs SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_0_1.src.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=33caa30e4cdcb3e86f4b1be8c6c30c46 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index dd93ac5ff7fb..cb6a8a41b5da 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=98a7a2b9765ad5e245b1b7b9be67060b diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index 85290804a76d..0038c995c1c5 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=84a29c8972011ec4b86f3c8235a7b5d2 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index 94e7e021d050..1438d3a0b3bf 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://globin.cse.psu.edu/ftp/dist/sim4/sim4.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=fca00baca723bafd7976eff8dccc5c26 diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 index f450616ce76f..1296192a5805 100644 --- a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 +++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost:= SLOT=0 SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=7c64014825a157024d03614c037abcfc diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index dd918eb81e3f..5f524d7db295 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=d73db26f06440dc2c2a1e25befe5d490 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 index 19d8ad2c2641..59bde8a22171 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_11.00.8cbe486/T-COFFEE_distribution_Version_11.00.8cbe486.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=a1771c6229fc2548e173d5592657c1b5 diff --git a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 index ab53ed469fe3..bd0135fe4550 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align virtual/fortran SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_9.03.r1318/T-COFFEE_distribution_Version_9.03.r1318.tar.gz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=369169186d5a67fbb6f2de9ebbc8fd6e diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 index aac2b5c4cd34..705162448924 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=efee8069c83c578acac8e57b429ad985 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index d4aa6864246b..860f5c79a6b5 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=6f933fde60eb23f0e50fbe5e137bbc7e diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index 577311371d1b..46d2891d17fe 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee wxwidgets 04e063b0eff26daaea83d859dd9d6e05 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 wxwidgets 04e063b0eff26daaea83d859dd9d6e05 _md5_=ce129f3e61a849cfd3654e5a9fa4b17a diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index 5f352608aa67..5b169c5e6d54 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz _eclass_exported_funcs=src_prepare:- src_test:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=3f4bcdf31fe276f90a95e2f4b311deae diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index a808aca1bdcc..071a24182fe2 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -9,5 +9,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6adcbb8c658bdc3c40f797c61f5c58b0 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 index f0b611b672e6..2e8d666219bf 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 @@ -11,5 +11,5 @@ REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:- pkg_setup:webapp src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee webapp a76ebd3cb5649737496e8238992dd7ca +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 webapp a76ebd3cb5649737496e8238992dd7ca _md5_=e8bc8c4496d6c751b8f8452324e059f4 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index 901cad119cdf..1a35f7501b83 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -8,5 +8,5 @@ LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 _eclass_exported_funcs=src_prepare:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=f6e357557efc2f86eab0adadd32142ce diff --git a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 index 682c254c7825..1d4b879acd01 100644 --- a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 +++ b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl !sci-biology/ncbi-tools++ SLOT=0 SRC_URI=ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/ARCHIVE/12_0_0/ncbi_cxx--12_0_0.tar.gz _eclass_exported_funcs=src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=bc882208706b78e231cbfd78c7b5799e diff --git a/metadata/md5-cache/sci-biology/vaal-46233-r2 b/metadata/md5-cache/sci-biology/vaal-46233-r2 index 3361d9e8c4c3..3b434cc1014a 100644 --- a/metadata/md5-cache/sci-biology/vaal-46233-r2 +++ b/metadata/md5-cache/sci-biology/vaal-46233-r2 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/allpathslg SLOT=0 SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=93fba567a04e46611159af4ccc822131 diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index cf0fc57b441a..00507124a5c9 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=c40169dc993f3444a3e2f41ad69a920d diff --git a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 index 7ec19937da92..30d81fd9a800 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 +++ b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.0.18.tgz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=a119a595dc7b0d122295010a78b3aa06 diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 7f18cc0f25ab..7fb569a2ef97 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 61cad4fb5d800b29d484b27cb033f59b ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=b46e328f5bece618fd1f41cde92b68c0 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index 4efe8ce8ba25..731ec448399c 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=1e58c830b49ced05ae9960fcc2dead13 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index 01c065bec4d4..c0a505f820a6 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=b2a6486af275e75c6365ab7eeba1e0bd diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 index df47f5788fee..aa8ee19c165a 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=6ebc94c9eb0083edd0308af8a336afe0 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha index 7156df27a1b3..b194cfa29466 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha @@ -10,5 +10,5 @@ RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=3fc50009d15dddcf126bbf0735404920 diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index a1890c3cf161..5dbf1f7bae81 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -10,5 +10,5 @@ RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 6eb35f81556258a4bc9182ad3dfd58ee +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 772b26a6baefb4c8c5e0c1fc724508b7 _md5_=3a4ba9b4e7b8efec51cfc79d261fefd3 |