diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
183 files changed, 183 insertions, 183 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 index 231550136981..2745e25235b1 100644 --- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 +++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 @@ -10,5 +10,5 @@ RESTRICT=mirror SLOT=0 SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bf78ab8abbdb34e4f7d5c8a0b4429c0f diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index 8ad73560b267..a8242a89bd66 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -10,5 +10,5 @@ RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:webapp pkg_setup:webapp src_unpack:perl-module src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 webapp a76ebd3cb5649737496e8238992dd7ca +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 webapp a76ebd3cb5649737496e8238992dd7ca _md5_=bccaeef3292f6df307fc14fb5a2a74b2 diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 index 08f0bf886608..865123ede658 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 +++ b/metadata/md5-cache/sci-biology/abyss-2.0.2-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= virt SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.2.tar.gz -> abyss-2.0.2.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=3b173739bd4e2f9d61a49918b3b8bc05 diff --git a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 index 5246901dde5e..fccbcb0f0345 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-52488-r2 +++ b/metadata/md5-cache/sci-biology/allpathslg-52488-r2 @@ -9,5 +9,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/vaal SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=89ad1ab9497c178e43302814589f5f26 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r3 b/metadata/md5-cache/sci-biology/amap-2.2-r3 index 663a7edee9e6..7e586ecf1c90 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r3 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r3 @@ -10,5 +10,5 @@ RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-opt-2 pkg_setup:java-pkg-opt-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-opt-2 77d2e22d0de7640f817d20e861c0ff3f java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6bd792e8b76c06ee993b88f83e48b907 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r3 b/metadata/md5-cache/sci-biology/amos-3.1.0-r3 index cfd2b15afe5f..47e32e77fd11 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r3 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz https://dev.gentoo.org/~soap/distfiles/amos-3.1.0-fix-c++14.patch.bz2 _eclass_exported_funcs=pkg_setup:python-single-r1 src_prepare:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=df778f6981c64e06ab2354697c3fc4a6 diff --git a/metadata/md5-cache/sci-biology/arb-5.1-r1 b/metadata/md5-cache/sci-biology/arb-5.1-r1 index ad28a64b3158..4d417fd72c00 100644 --- a/metadata/md5-cache/sci-biology/arb-5.1-r1 +++ b/metadata/md5-cache/sci-biology/arb-5.1-r1 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.1/arbsrc.tgz -> arb-5.1.tgz mirror://gentoo/arb-5.1-glibc2.10.patch.bz2 https://dev.gentoo.org/~jlec/arb-5.1-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=55cafcf3d37a81cfa2273ca02c35bb00 diff --git a/metadata/md5-cache/sci-biology/arb-5.2 b/metadata/md5-cache/sci-biology/arb-5.2 index 1c88f254778f..b135c89103d3 100644 --- a/metadata/md5-cache/sci-biology/arb-5.2 +++ b/metadata/md5-cache/sci-biology/arb-5.2 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.2/arbsrc.tgz -> arb-5.2.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.2-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=f0ab0e2c5ca080655274968b7915db12 diff --git a/metadata/md5-cache/sci-biology/arb-5.3 b/metadata/md5-cache/sci-biology/arb-5.3 index 52d9d9472ba4..22c824c709cc 100644 --- a/metadata/md5-cache/sci-biology/arb-5.3 +++ b/metadata/md5-cache/sci-biology/arb-5.3 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.3/arbsrc.tgz -> arb-5.3.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.3-linker.patch.xz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bf2908058bcd4bfbaa7c0eb481d7c999 diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r3 b/metadata/md5-cache/sci-biology/ariadne-1.3-r3 index 35dc8b2c19ba..0c31b272dc4d 100644 --- a/metadata/md5-cache/sci-biology/ariadne-1.3-r3 +++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r3 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1 SLOT=0 SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a99266aecef97d81f48df25aa43fbb4a diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 5dd49e527115..acae9755ef5e 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=5660f556708e8c3b5d43c9ef832e66ec diff --git a/metadata/md5-cache/sci-biology/bamtools-2.4.1 b/metadata/md5-cache/sci-biology/bamtools-2.4.1 index 5aa1d68a05f9..266c18f8f775 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.4.1 +++ b/metadata/md5-cache/sci-biology/bamtools-2.4.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/jsoncpp-1.8.0 sys-libs/zlib SLOT=0 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.4.1.tar.gz -> bamtools-2.4.1.tar.gz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=d1565aa3d9a639f7316a0c8588ecfc41 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 index a7424a9c39b5..44d6efe4ba9b 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-j SLOT=0 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/beast-mcmc-1.7.5.tar.xz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=ff6d5ad394902a1137f7b3a310e2da17 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-9999 b/metadata/md5-cache/sci-biology/beast-mcmc-9999 index 88dcf87e2b54..1c96826779d9 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-9999 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-9999 @@ -8,5 +8,5 @@ LICENSE=LGPL-3 RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-java/junit:4 dev-java/jebl:0 dev-java/matrix-toolkits-java dev-java/commons-math:2 dev-java/jdom-jaxen:1.0 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:subversion pkg_setup:java-pkg-2 src_unpack:subversion src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e subversion a5d5826a85609611f098c0553eb24cc1 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e subversion a5d5826a85609611f098c0553eb24cc1 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=8ad11964919894b7a04467aea903b1c3 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.26.0 b/metadata/md5-cache/sci-biology/bedtools-2.26.0 index 01719a149196..19ff67ae13f3 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.26.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.26.0 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz _eclass_exported_funcs=pkg_setup:python-any-r1 src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=76f5a1f39ff7b393994b8a22dc4a192f diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 9676362b6d9f..1dcf1da5c037 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=abc362f15c5107d96bedfb879ea0375f diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 index 1070b4ae39ee..49c1545c22bb 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=9731727dae2a2514bcaa486b0059272e diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4 index 9c27e383e869..27b7fd407403 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.1.4 +++ b/metadata/md5-cache/sci-biology/biopandas-0.1.4 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz _eclass_exported_funcs=src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=4bf8773b4c6c512c3e616bf999994904 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.1 b/metadata/md5-cache/sci-biology/biopandas-0.2.1 index 7676b19dc937..d49675742b38 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.1 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.1.tar.gz _eclass_exported_funcs=src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=50d773beb88c02a8cbddc153bb75a0e6 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index ac33071823bf..d6f06b38e828 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -12,5 +12,5 @@ REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=be22a76392a6e5c121e4b6d388045faa diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1 index 33c429e667f8..5577eb200db9 100644 --- a/metadata/md5-cache/sci-biology/bioperl-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1 @@ -9,5 +9,5 @@ PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-d RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=210415961127105f0fc625670ba9e423 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index f409720973a7..a68b3bf461f3 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=2470d7ecf1b6ff1902a8d74057748480 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 index 2e397f71e5cc..5cfcf25785d1 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=fd4229be06b3975302e9e37ca35601d2 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index 48ec2ba2cd6b..c9a6836eeb89 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=cb366a6a0c6cf3c12320c2d6d3551abe diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 index 448b713e6fab..b44a5d85510b 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=025cd5fa89be402f3296160dbf755c8b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index 10ea39fb6dc6..02474cfe2df2 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=9caec4e5b47cbf306a1689903f2a018a diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 index bf2d96dfad4d..97b1bb6b5bce 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 @@ -9,5 +9,5 @@ RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/ RESTRICT=test SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=26abe4f8477c1a1c22bd8515484ce1c1 diff --git a/metadata/md5-cache/sci-biology/biopython-1.68 b/metadata/md5-cache/sci-biology/biopython-1.68 index 9942646724f6..9be42dd51544 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.68 +++ b/metadata/md5-cache/sci-biology/biopython-1.68 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_py SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.68.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=0435edc9aefff4e2ffb912314f75430a diff --git a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 index c046ac2d3111..29850ca96efd 100644 --- a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 +++ b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( ruby_targets_ruby21 ) SLOT=0 SRC_URI=http://bioruby.org/archive/bioruby-1.4.3.0001.tar.gz _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem bafb56b9a7b7e84fd091508783628e78 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem bafb56b9a7b7e84fd091508783628e78 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=e8da8e69c8a12eed091a3b299fb0cd23 diff --git a/metadata/md5-cache/sci-biology/bioruby-9999 b/metadata/md5-cache/sci-biology/bioruby-9999 index 52aec342bd20..578a41f1cdf6 100644 --- a/metadata/md5-cache/sci-biology/bioruby-9999 +++ b/metadata/md5-cache/sci-biology/bioruby-9999 @@ -9,5 +9,5 @@ RDEPEND=ruby_targets_ruby21? ( dev-ruby/libxml[ruby_targets_ruby21] ) ruby_targe REQUIRED_USE=|| ( ruby_targets_ruby21 ) SLOT=0 _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem bafb56b9a7b7e84fd091508783628e78 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e ruby-fakegem bafb56b9a7b7e84fd091508783628e78 ruby-ng e52d9a73c7757cdc3b195bcd5cf9d389 ruby-utils 453e0fe0dd06baac93b584c91528cc62 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=0722552bc2425246965750e9fa29c4e4 diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2 index 3a184b5e50d9..c334bf780737 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r2 +++ b/metadata/md5-cache/sci-biology/blat-34-r2 @@ -8,5 +8,5 @@ LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d48361335699038107318f5ca57533e8 diff --git a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 index 72058925fde9..5d25dacd0001 100644 --- a/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 +++ b/metadata/md5-cache/sci-biology/blossoc-1.4.0-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-libs/gsl:= dev-libs/boost:= sci-biology/snpfile SLOT=0 SRC_URI=http://www.daimi.au.dk/~mailund/Blossoc/download/blossoc-1.4.0.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=2fe1853c7621b633d2ee794ef3176e3f diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2 b/metadata/md5-cache/sci-biology/bowtie-1.1.2 index f91891fa7c2b..fd0c335bd4ec 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2 @@ -9,5 +9,5 @@ LICENSE=Artistic SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d123eea345ef4aa6c2c174df53575eeb diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 index dd78d9fdae20..f226bfb8495f 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=tbb? ( dev-cpp/tbb ) SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=069dc133bc01cabadeda1e327034b7a7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.6 b/metadata/md5-cache/sci-biology/bowtie-2.2.6 index 0cd38ae7c64b..cf1aa68446d3 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.6 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.6 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.6/bowtie2-2.2.6-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=9a4ea0d94d151da708192284a1117dd7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9 index 81cfe9ef3927..84190f307b83 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.9 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=46d87c867cd445707dc1913cf3dd7eb6 diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.12 b/metadata/md5-cache/sci-biology/bwa-0.7.12 index a8ce128d77fb..65329bbc22bc 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.12 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.12 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.12.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=ae8e9d2f58c9bc5022e9e224c56d2e6d diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.15 b/metadata/md5-cache/sci-biology/bwa-0.7.15 index 1eaddc518425..988e7b73538f 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.15 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.15 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.15.tar.bz2 _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=1e7706ac5539187e6a18ffb1b2167e2c diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 index 22438127ce20..ec9ae2caeee6 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bbe0ae10275a73485487e08f19f4ac1b diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 index 95947d585cf9..632941bc80fd 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=31d235d5645f367b8eb15e10358c7475 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 index 7f0d5211d444..fb5c0318da78 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=2e8f46674a2f0906f57ffd70a5ebb549 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 index 6a6d695bb667..99cc981da0b3 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a497f56fb650c3a8ca539939429b6bfb diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 4bd53c62a60e..3c5b834fb84d 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -7,5 +7,5 @@ LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=5c8ba46cd87128b1ddae72e6ca3d07db diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 index 41a99834fab4..b66cac5d6493 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r2 @@ -10,5 +10,5 @@ RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=9e376a1d2ae782d9495b0c6c318aa097 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 index 9492799ba298..697ad8110a68 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz _eclass_exported_funcs=src_unpack:qt4-r2 src_prepare:- src_configure:qt4-r2 src_compile:qt4-r2 src_install:- -_eclasses_=base df2aa567b3f0595aae0d0923889f7631 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c qt4-r2 b7985a3197fbc3a22d059f19904e735b toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=base df2aa567b3f0595aae0d0923889f7631 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c qt4-r2 b7985a3197fbc3a22d059f19904e735b toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=8348b4854d048ec19d5706f2d0461a2c diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r2 b/metadata/md5-cache/sci-biology/clustalx-2.1-r2 index 01f9ba57ccd4..3c47901202b7 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r2 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r2 @@ -9,5 +9,5 @@ RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e qmake-utils 990448b067cb3cfe1443bc25fb57239c toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=660b3463bc17c65cb8772961e042a81c diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index 43efae0ba68f..ab1e2af69c4e 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -11,5 +11,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d533d3bc63ad3989cce879478db9de97 diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 index 01d70e0ce2d9..5ca248a9c4db 100644 --- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 +++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen: SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=c3b164a465e5b7593cdeb3bbf345f549 diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 index e480bd76096c..5631fc35f26f 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=aadd3cbbb875bbc0d53d08117691ad8e diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1 index c0e75bf1dab1..a13669d7f970 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=97419777f320b8d18d7fe0c86a34d414 diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4 index e53d5c118f59..a5c85388ee27 100644 --- a/metadata/md5-cache/sci-biology/diya-1.0_rc4 +++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal SLOT=0 SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 _md5_=5d4639d7c08c43e2c2208492508fd56c diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 index 43e13158bce3..c3170c1334e3 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=dbee2f511488caf9eadadb20d043a2da diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 index f3d9ae1a23af..028e2de01717 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4166ba28131fdf70907b31300aa4c08b diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 index d226c8831099..07411c8a7f77 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plp SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=ef491b452e56be12961f62b16961f4f1 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 index 09c96507b74e..653f8e43b833 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bfee4f5b2b2adadb41de2eb02d4dcbc0 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 index c8e9cd546e52..73e513298dd2 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=9f8b2caa273f4ae3b0463e6de6782660 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 index b52827251a95..13702e45d5b7 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=920906439fbc5278460201b23a615736 diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 index 4aeb7a37c998..01514c3f5ce6 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-l SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:- src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d82c7c44ec76fa5d6165769a73e5df9a diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 index 799926e4d458..dece1dc7c222 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=1b156bed7ea031aeb5464836dd987f18 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 index 13ee75124ed9..ff227e0bc910 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=83d02ae22d4e1864669639d9289cd112 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 index 26e8fb8af2bc..51b99fbcf47f 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=73b0c29964ea3506d18ef6b6c8df70e1 diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 index 94c1579cc174..6b27ad8c5629 100644 --- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 +++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.660 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.660.tar.gz -> embassy-meme-4.7.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b18db6d7a2159272c7b69d34a14dc9b5 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index 2e55b8079203..ec3542fc5725 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-l SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=84df94b7c4b0f044de45cef524cbf453 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 index ea47bd062a14..47e237c2285a 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=00620d36fbf4790dc2ecfb240ba9816c diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 index 4196ca0bd8e5..f30c689272b7 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4cb685046b5a39b624eb3467b815c2c4 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 index 10aba73c8da6..4c181c6f9d02 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=634d624be78f958ed7fca02e7dc43bd4 diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 index b18e184e7715..c52ae1edc062 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:emboss-r2 src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e50220ee11093554b589c1f9f53e7c09 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 index 02f6f751ecdf..f78060b9d6e0 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz _eclass_exported_funcs=src_prepare:emboss-r2 src_configure:- src_install:emboss-r2 -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d257de40bcdb33c0735daac8a5f15fda diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 index 546d7512b318..d8753ddbb470 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 @@ -11,5 +11,5 @@ RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:emboss-r2 src_configure:emboss-r2 src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 emboss-r2 e6c8236c06e1e543b4feef45c31dd618 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=99a47266a2a8f2fd0a874111491146e2 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1 b/metadata/md5-cache/sci-biology/eugene-4.1 index 86b137026c6d..e538a7899fb6 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1 @@ -10,5 +10,5 @@ RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1157/eugene-4.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=6f1638a54685839c739157c9f641b358 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index 97d46bf480e3..1bb775184d4c 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -10,5 +10,5 @@ RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=8f5a68a22051f24d76cd43774022915b diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 index e7fe54fe3de7..6afd851a372a 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=2efd53d13e6f08e4144477038f41e4af diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1 index c0283b52ce68..b66ac28f3d96 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5-r1 +++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6d15a446bfc7659cceaabe3567001583 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 29a783ba4abb..ad87fafbabab 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sy SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=a2d4ea80b964801c45f62ae737430d6d diff --git a/metadata/md5-cache/sci-biology/fasta-35.4.10 b/metadata/md5-cache/sci-biology/fasta-35.4.10 index 96be830d619c..8c9de5d1b85c 100644 --- a/metadata/md5-cache/sci-biology/fasta-35.4.10 +++ b/metadata/md5-cache/sci-biology/fasta-35.4.10 @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta3/fasta-35.4.10.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=bc70246741c824a5b11b9e292d26c372 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index cce56123b934..226c55a819de 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=7b46f81d2659e9120c49874e774b5ca0 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7 index 8396167065a3..3d5c612e8a83 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.7 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=20d72299931c8f8e092006a9b668182c diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index ef1756e32df7..b1f7087298f1 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=f2b648d93a4c0ca58285574958cde15a diff --git a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 index 85e55011bc09..58004b920c73 100644 --- a/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 +++ b/metadata/md5-cache/sci-biology/finchtv-1.3.1-r3 @@ -7,5 +7,5 @@ LICENSE=finchtv SLOT=0 SRC_URI=http://www.geospiza.com/finchtv/download/programs/linux/finchtv_1_3_1.tar.gz _eclass_exported_funcs=src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=08355830f28d1052c2ab527b82a8dd68 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 index 5f05dd014f2f..6e0fb7d08b61 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.4.4-r1 @@ -9,5 +9,5 @@ RESTRICT=mirror bindist strip SLOT=0 SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.4/fahclient_7.4.4-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.4/fahclient_7.4.4-64bit-release.tar.bz2 ) _eclass_exported_funcs=pkg_preinst:- pkg_postrm:- pkg_postinst:- pkg_setup:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 user e4b567c44272a719fabf53f0f885d3f7 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af user e4b567c44272a719fabf53f0f885d3f7 versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=549f0f21c2d596dc98e902cadff8b39a diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4 index 54432e4d94bc..cb7212f6ecad 100644 --- a/metadata/md5-cache/sci-biology/gatk-2.4 +++ b/metadata/md5-cache/sci-biology/gatk-2.4 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:vcs-snapshot src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 vcs-snapshot 03289f51c769cf409d200d2d628cdd6e versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af vcs-snapshot 03289f51c769cf409d200d2d628cdd6e versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=8afea474ed6c1f4ad5ac6d6a18c49542 diff --git a/metadata/md5-cache/sci-biology/gatk-9999 b/metadata/md5-cache/sci-biology/gatk-9999 index 0f3fa39ef304..ee574f9e98d2 100644 --- a/metadata/md5-cache/sci-biology/gatk-9999 +++ b/metadata/md5-cache/sci-biology/gatk-9999 @@ -8,5 +8,5 @@ LICENSE=MIT RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:git-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea git-2 195a672bfaf52d868442171c9469bbb6 java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=df4fa840e567320d0f100f0073200f23 diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index b8cc9ae06a5a..f36b1a0d702f 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e28918ff8ca46c8b8254e4e36f8d0bcf diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 index 632ad6c1b84b..31e7946b5d20 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 +++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=fda3f095f34da47d12e170b3c40dfd67 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 58dbec08b4ed..47ef0c28bc03 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=http://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=1a77df881e0fba38094c344e97b529a5 diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index 1428f0dc9458..15ed0ee3f37c 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=addae30e588a0c7a05baea53d553af0f diff --git a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 index e1ba7a9b442f..3a4d40502eca 100644 --- a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 +++ b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 @@ -7,5 +7,5 @@ LICENSE=gmap SLOT=0 SRC_URI=http://research-pub.gene.com/gmap/src/gmap-gsnap-2015-12-31.v5.tar.gz _eclass_exported_funcs=- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=398e7f0670f5bd07e45f2780d7fe03cf diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 index bd7abb9184db..2026b94d00c8 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=03afdad422e8ac673016b7bbfd574c75 diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 index a3ce0267f639..5ea35761bdf3 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=5d560004d41472d184dd71e7ea06a04c diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 index a63f21f566cb..8ba4098fd2e7 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=62b1fc794a90a87e0f80ab795108ee3c diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 index b7d2292818fc..fa0a851e557a 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=2599766d541e65f4acfb94c4fa4e974e diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 index 1e6ada8491dc..d37902ae7a31 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=416e64f4b9f8268c7d795c45e35bacf7 diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index d06515c2f9c6..70876267eb30 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=ce77e1e27bd52fed2fd2af52744d6288 diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2 index 082371261081..5f5dee06a611 100644 --- a/metadata/md5-cache/sci-biology/kalign-2.03-r2 +++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=175d26382226c7bed2b44be485b01d01 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r3 b/metadata/md5-cache/sci-biology/lagan-2.0-r3 index f7c39f69c3bb..6da85f3a1c75 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r3 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r3 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=c9dbddd6a22f2e20ff25d0aa1e6f4280 diff --git a/metadata/md5-cache/sci-biology/last-230 b/metadata/md5-cache/sci-biology/last-230 index 534bd473ebfa..1f7388c3be06 100644 --- a/metadata/md5-cache/sci-biology/last-230 +++ b/metadata/md5-cache/sci-biology/last-230 @@ -8,5 +8,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://last.cbrc.jp/archive/last-230.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=5da658e6779591b0d1b9ad3413a0e7b2 diff --git a/metadata/md5-cache/sci-biology/last-299-r1 b/metadata/md5-cache/sci-biology/last-299-r1 index 2b66fbd55a78..05ecbae00f77 100644 --- a/metadata/md5-cache/sci-biology/last-299-r1 +++ b/metadata/md5-cache/sci-biology/last-299-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://last.cbrc.jp/last-299.zip _eclass_exported_funcs=pkg_setup:python-single-r1 src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=ec5206661373a6ef6ad77450dfbdb915 diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050 index 8becd56a7e74..524f326b1db7 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.050 +++ b/metadata/md5-cache/sci-biology/mafft-7.050 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=10435da51da43a9bd92e9e337fb92445 diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215 index c300bbf23ca8..313f6e783c1c 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.215 +++ b/metadata/md5-cache/sci-biology/mafft-7.215 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=26a81f4b6b0ff69fbc3eba8869681491 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index 289716bd2490..246d102ffd99 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4701ed0cbf5fff28c6de7c8b01e134af diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 index c3aa1312e08f..d5ae966191d9 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=39ffb0025210075a8d7d7f6f81f8da56 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 index ee6b25060457..1b4a0e11c01b 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 @@ -9,5 +9,5 @@ RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=dee50558d10e75ff9e96f4c3f177c55f diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312 index 4c0a864cbd15..bbdd0bc32aeb 100644 --- a/metadata/md5-cache/sci-biology/mcl-08.312 +++ b/metadata/md5-cache/sci-biology/mcl-08.312 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135 index 974a12acf230..80c229964177 100644 --- a/metadata/md5-cache/sci-biology/mcl-12.135 +++ b/metadata/md5-cache/sci-biology/mcl-12.135 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=24cf3aad7375304f2721048d2f76b5f1 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index e6578f3d3718..32339d18675a 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=3429c68609b6c70e047d577379f68f97 diff --git a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 index 2b71238a31ac..02090fcd82ad 100644 --- a/metadata/md5-cache/sci-biology/meme-4.11.2_p2 +++ b/metadata/md5-cache/sci-biology/meme-4.11.2_p2 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://meme-suite.org/meme-software/4.11.2/meme_4.11.2.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=a4080439675628436c06de8db9f59c6e diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2 index 77dbd46d938d..cd816425b8e4 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost[threads] dev-util/google-perftools SLOT=0 SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4e9fc8a550640febbc0b71544c16618c diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index b2b42005fb24..e2f795e9a15f 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz _eclass_exported_funcs=src_unpack:vcs-snapshot src_configure:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 vcs-snapshot 03289f51c769cf409d200d2d628cdd6e +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af vcs-snapshot 03289f51c769cf409d200d2d628cdd6e _md5_=e8bd620c581af022566733e65d479626 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index bf80ea6a5d23..72d9e2964867 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=http://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=abcc03749068210ba5c44ba0b4a85e27 diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 index aba6177e1589..2b158c4f844e 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a082c9b1f1b5f9fa9b85e23eb7009a6d diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index d848463496fb..1d77768e8e4e 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a944448f568e57bb9f221cd1f437ab09 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23 index a575cb5ad38d..6c70b8973cbd 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23 +++ b/metadata/md5-cache/sci-biology/mummer-3.23 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=c256f298b416306c1be7005e7877f7b9 diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 605aa86f6efd..de2bd0a08fef 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=500ff424aff8c56744362bc87a3ff285 diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 index 065e6186e06d..347701daffa1 100644 --- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 +++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 @@ -10,5 +10,5 @@ RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontc SLOT=0 SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=770169ddfbcde7c5fbe57bff9b10ca14 diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2 index 01b7c8753808..6a0699d55ea6 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3-r2 +++ b/metadata/md5-cache/sci-biology/njplot-2.3-r2 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=c70b49c7f5e1a92f5169df372f9638c6 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1 index 447204abd34e..a35d756be1aa 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b0df20d47905df6a290c5fe2f79fd48b diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1 index 0597c0847883..02b98ecaa24e 100644 --- a/metadata/md5-cache/sci-biology/paml-4.4c-r1 +++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1 @@ -7,5 +7,5 @@ LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=c46d709378282d4ccbb567aaa00ee01a diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 index ff3eded6c149..26a56f991f17 100644 --- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 +++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 @@ -9,5 +9,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=phrap-1.080812-distrib.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e72f3e08accb23ebf55562689dad5f46 diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1 index 2cd44abce3c2..94dcc91bc02d 100644 --- a/metadata/md5-cache/sci-biology/phred-071220-r1 +++ b/metadata/md5-cache/sci-biology/phred-071220-r1 @@ -8,5 +8,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=phred-dist-071220.b-acd.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=92065ca72fd55796ea38e3d5ae9ee8b8 diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1 index 49d536ca8325..d68a9925d957 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.69-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e38b117238f85d8861b4bb7d82c617d2 diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1 index cdd10f722456..e54b8a2559c5 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.696-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=974f8dc4ee6875c5d84eba7b501bf02a diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 index 6e7e5828a74b..71bb6325f960 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=fcca6fb4f9e88f5eb6a63a3ee0c79df7 diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index a5632cda8a17..825862a037a6 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:java-pkg-2 src_configure:java-ant-2 src_compile:java-pkg-2 src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea java-ant-2 4e2b30d918dda38a51839a4d45282b62 java-pkg-2 c4e6af2574fd1dc79b43a6e27af4b5fb java-utils-2 1971a6927fcd7ec839f7e12b28a24bdd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=09627e6bb74ee9997324bde01a56bcbd diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1 index 1c0226b76c49..070b8b7ec422 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r1 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r1 @@ -8,5 +8,5 @@ RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=7b5a6d618aac08240cf165a04509c319 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 index a10859d7aff0..167a228a3dbd 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d9f7901d3776c424cfb93782cc6ddafa diff --git a/metadata/md5-cache/sci-biology/plink-1.07-r1 b/metadata/md5-cache/sci-biology/plink-1.07-r1 index 92ba357c0526..c5cc8fea4119 100644 --- a/metadata/md5-cache/sci-biology/plink-1.07-r1 +++ b/metadata/md5-cache/sci-biology/plink-1.07-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib lapack? ( virtual/lapack ) SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/plink/dist/plink-1.07-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b659cc5ab8af123ceaf15f1349214345 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index f6a09ded7da5..1a095011b841 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=570249dc23feeff7b47b3e81df358196 diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index ef8363b9de0f..a8ada9edc5e4 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=4f0b8d6c2192465644af4890a995d48a diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603 index 5fe699572fd8..f7adfdb0b66f 100644 --- a/metadata/md5-cache/sci-biology/prank-140603 +++ b/metadata/md5-cache/sci-biology/prank-140603 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=17023476000980284365a9c0ed04a6f0 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.5 b/metadata/md5-cache/sci-biology/primer3-2.3.5 index d24aa94ff3b3..4d7e48db398a 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.5 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.5 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.5/primer3-2.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b7f3f26331b5241399cbf40ac9eeeabc diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.6 b/metadata/md5-cache/sci-biology/primer3-2.3.6 index 77e25eec1af3..1fb5ec85b19b 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.6 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.6/primer3-src-2.3.6.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e95de8dec7345b06ff7fac5c6c009d53 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index bcff3efec76b..4c14a9a14d4d 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=8b3d4a5940e96102e289acad426724d9 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index 3b772656e2a0..bd7aeb347c5a 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=19a24bd3c543d599d5b3392e66b7022e diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3 index f3e1f3bff9f7..aedebd986fcf 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz _eclass_exported_funcs=src_configure:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=9cea3bcc55e864076d7e4b542f657f96 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39 index e1ba0ccf0517..a510d8c65bf1 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.39 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.39 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=8e866cc812e134cdc7a7837e5b60aa21 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40 index 2e33892545fb..b5fb31672350 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.40 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.40 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b641a6cfd444fa4b83d5963246948636 diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1 index a13d850f51ba..dc451a2e5460 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.2.1 +++ b/metadata/md5-cache/sci-biology/psipred-3.2.1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=bf7aa50ff789d669fe4846e0e41828d7 diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3 index 9badc4138a4c..cb38ae958fed 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.3 +++ b/metadata/md5-cache/sci-biology/psipred-3.3 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=d719359ecbbd5c0825e93788cc4f0af1 diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4 index 2c8b98b32dfb..9fdbf6366286 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.4 +++ b/metadata/md5-cache/sci-biology/psipred-3.4 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=671e20dbd509ebdd9e9c492e2c53b6a1 diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5 index 0fe0727021ac..57092fec020a 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.5 +++ b/metadata/md5-cache/sci-biology/psipred-3.5 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix df8265631f8bf5f5df387e9b987121f9 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=671e20dbd509ebdd9e9c492e2c53b6a1 diff --git a/metadata/md5-cache/sci-biology/pysam-0.9.0 b/metadata/md5-cache/sci-biology/pysam-0.9.0 index b1651bd82701..46caff85ec84 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.9.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.9.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.9.0.tar.gz -> pysam-0.9.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:distutils-r1 src_compile:- src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=distutils-r1 372bbe39047c0a2550319a3a82f3e063 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=0f649b2f11f84f90b841d9b791afb9ea diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 index adbdd59c654a..19c734155ab6 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r2 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl sci-biology/hmmer SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=35f5a46d4490059eb478c8a8c7998ac5 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index e67e013380c3..1f1c8962cfc4 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=f2b8e0b4e5701d9b20bcbf9151c9b868 diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08 index 3d0ba8141c89..27219b5e2ba7 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08 +++ b/metadata/md5-cache/sci-biology/recon-1.08 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=2ddd537d912c7c88b6f0b0d203a51613 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index d1a0c077d49c..5e2997ae1cd7 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=7aa6de8741afab9d848f4cbada44c7ad diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 index 6ee744020b78..b1b98b127e92 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=788c156d45287bef4f6aa876055bde4c diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 index 0a6bf6e2a9c7..58be1c50ff48 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-0.1.19.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=e1ccf59bd58eff379ed18ed6a93ebb35 diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 index bc9b0d694446..fd0c09537a9d 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_compile:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=fa48f0b2be780a9264eb9d727ec53335 diff --git a/metadata/md5-cache/sci-biology/samtools-1.0 b/metadata/md5-cache/sci-biology/samtools-1.0 index 4a1f527f6d36..a4b89f8ee401 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0 +++ b/metadata/md5-cache/sci-biology/samtools-1.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=7d366f23af02dfce6c9bf8b2621c8eae diff --git a/metadata/md5-cache/sci-biology/samtools-1.0-r1 b/metadata/md5-cache/sci-biology/samtools-1.0-r1 index d398d9d3bfaf..26d6dfd1ee3e 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=3b6a998ba682aeecd6ccf3fad3f54608 diff --git a/metadata/md5-cache/sci-biology/samtools-1.1 b/metadata/md5-cache/sci-biology/samtools-1.1 index e238faaf7a11..f44094fa682c 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.1 +++ b/metadata/md5-cache/sci-biology/samtools-1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.1.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=91c3979d63f4f6aad688f77b35bee881 diff --git a/metadata/md5-cache/sci-biology/samtools-1.2 b/metadata/md5-cache/sci-biology/samtools-1.2 index 0124f234d96e..f56d3d7cd356 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.2 +++ b/metadata/md5-cache/sci-biology/samtools-1.2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.2.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=057b47f1a39735a5310b243f703a7e4c diff --git a/metadata/md5-cache/sci-biology/samtools-1.3-r1 b/metadata/md5-cache/sci-biology/samtools-1.3-r1 index 173c0b89db37..bdd60cefc4b4 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.3-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.3-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.3.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=cf37f73f252597d9e20cd5b6bcd69b5e diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5 index 199fd63ab94a..1862b7e91bbf 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.3.5 +++ b/metadata/md5-cache/sci-biology/seaview-4.3.5 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4 index 0bb6a504f93d..12c55874f840 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.5.4 +++ b/metadata/md5-cache/sci-biology/seaview-4.5.4 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=38cc02682d853c813df2b6e81cbb51c5 diff --git a/metadata/md5-cache/sci-biology/seaview-4.6 b/metadata/md5-cache/sci-biology/seaview-4.6 index 0e1819d4eef7..3310bc3f075f 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6 +++ b/metadata/md5-cache/sci-biology/seaview-4.6 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=1a6723f1ab0e67cc0d63dd54a902900f diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index 7bddff06331b..f11b5faa6e7b 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=b6c214312349c09a0fe901e8d0235a32 diff --git a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 index bcf338916ea9..0d233af2c927 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.2.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.2.0.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_compile:- src_test:cmake-utils src_install:- -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 python-any-r1 27d7f9da7187d283b7f3eae8390b7b09 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=0a4cc55d3cd27897618671fdafc13e2f diff --git a/metadata/md5-cache/sci-biology/shrimp-2.0.1 b/metadata/md5-cache/sci-biology/shrimp-2.0.1 index 69c045fa6da1..87c9374b46e4 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.0.1 +++ b/metadata/md5-cache/sci-biology/shrimp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/emboss !sci-mathematics/cado-nfs SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_0_1.src.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=33caa30e4cdcb3e86f4b1be8c6c30c46 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index 0cb0a8afeb18..3a4843e32978 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=98a7a2b9765ad5e245b1b7b9be67060b diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index a83dde3a799c..ba1204691604 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=84a29c8972011ec4b86f3c8235a7b5d2 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index 3c363298f107..291205db32c1 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://globin.cse.psu.edu/ftp/dist/sim4/sim4.tar.gz _eclass_exported_funcs=src_configure:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=fca00baca723bafd7976eff8dccc5c26 diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 index 7555c87c3922..f5720eaa0a8e 100644 --- a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 +++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r2 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost:= SLOT=0 SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=7c64014825a157024d03614c037abcfc diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index a603a87731f8..5c06d907cbaf 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=d73db26f06440dc2c2a1e25befe5d490 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 index 0716de27a7ce..af983f8cdc9b 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_11.00.8cbe486/T-COFFEE_distribution_Version_11.00.8cbe486.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a1771c6229fc2548e173d5592657c1b5 diff --git a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 index 9b52ac107d27..f33a2145e0f9 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align virtual/fortran SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_9.03.r1318/T-COFFEE_distribution_Version_9.03.r1318.tar.gz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd fortran-2 9e7f20c99213f0627ff7f873d4aaa25d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=369169186d5a67fbb6f2de9ebbc8fd6e diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 index 1e4d4fdc718c..7250c5b0ddd6 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r4 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=efee8069c83c578acac8e57b429ad985 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index 882e86d9a551..58fad5a193a4 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=6f933fde60eb23f0e50fbe5e137bbc7e diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index af46bfe01b34..06ca52ab6dde 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 wxwidgets 04e063b0eff26daaea83d859dd9d6e05 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af wxwidgets 04e063b0eff26daaea83d859dd9d6e05 _md5_=ce129f3e61a849cfd3654e5a9fa4b17a diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index 44b717cd5dbd..59459262080f 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz _eclass_exported_funcs=src_prepare:- src_test:- src_install:- -_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=3f4bcdf31fe276f90a95e2f4b311deae diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 25198b95e247..3edf4279cca7 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -9,5 +9,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=cmake-utils 026933aff3889190eeb565b642cfe252 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=6adcbb8c658bdc3c40f797c61f5c58b0 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 index 8a1bdd5d4f87..b6593861a15f 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 @@ -11,5 +11,5 @@ REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:- pkg_setup:webapp src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 webapp a76ebd3cb5649737496e8238992dd7ca +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af webapp a76ebd3cb5649737496e8238992dd7ca _md5_=e8bc8c4496d6c751b8f8452324e059f4 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index 4cbd6b1b61ec..ce67e787f4e8 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -8,5 +8,5 @@ LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 _eclass_exported_funcs=src_prepare:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=f6e357557efc2f86eab0adadd32142ce diff --git a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 index d548cf214e0a..3c83445b1210 100644 --- a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 +++ b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl !sci-biology/ncbi-tools++ SLOT=0 SRC_URI=ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/ARCHIVE/12_0_0/ncbi_cxx--12_0_0.tar.gz _eclass_exported_funcs=src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=bc882208706b78e231cbfd78c7b5799e diff --git a/metadata/md5-cache/sci-biology/vaal-46233-r2 b/metadata/md5-cache/sci-biology/vaal-46233-r2 index 3dd492639a5f..1e8dc00dec36 100644 --- a/metadata/md5-cache/sci-biology/vaal-46233-r2 +++ b/metadata/md5-cache/sci-biology/vaal-46233-r2 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/allpathslg SLOT=0 SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=93fba567a04e46611159af4ccc822131 diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index 082f297177d1..2c83e5c303c6 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e perl-functions 01e8c68d5a528bbcda4d3c60205983df toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=c40169dc993f3444a3e2f41ad69a920d diff --git a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 index 34007a343a48..c7b686da8bd5 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 +++ b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.0.18.tgz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=a119a595dc7b0d122295010a78b3aa06 diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 3dbebfc5fb84..1c964481c6e0 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea flag-o-matic 08e000dba2ecbfac8f7dfc36affdfacd ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=b46e328f5bece618fd1f41cde92b68c0 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index a15cd5bc3263..4169af08d96c 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=1e58c830b49ced05ae9960fcc2dead13 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index f60982d93568..40dd3e5b4787 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 autotools-utils 5a4611dfba155b1659528663fad4cd5e distutils-r1 372bbe39047c0a2550319a3a82f3e063 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea libtool e32ea84bf82cf8987965b574672dba93 ltprune 2770eed66a9b8ef944714cd0e968182e multibuild 72647e255187a1fadc81097b3657e5c3 multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 284a473719153462f3e974d86c8cb81c perl-functions 01e8c68d5a528bbcda4d3c60205983df perl-module 863b35d127db98823d439f8d73c2d011 python-r1 e9350ec46bb5c9f3504b4fbe8b8d8987 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af unpacker f40f7b4bd5aa88c2a4ba7b0d1e0ded70 xdg-utils b9389dfad0ee8f8e0b2a41b79fcf7120 _md5_=b2a6486af275e75c6365ab7eeba1e0bd diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 index cf74a4301701..6bfda15c5124 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=6ebc94c9eb0083edd0308af8a336afe0 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha index 4cfe29d20b8b..cfdd62df7ad2 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha @@ -10,5 +10,5 @@ RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 versionator c80ccf29e90adea7c5cae94b42eb76d0 +_eclasses_=epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 9c113d6a64826c40154cad7be15d95ea ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 _md5_=3fc50009d15dddcf126bbf0735404920 diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index 2a230d23ecf1..36a823717a6e 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -10,5 +10,5 @@ RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 8fec6b1eb195836560e70b66d98fb163 +_eclasses_=autotools 7027963e8e8cc12c91117bdb9225dc26 libtool e32ea84bf82cf8987965b574672dba93 multilib 97f470f374f2e94ccab04a2fb21d811e toolchain-funcs 185a06792159ca143528e7010368e8af _md5_=3a4ba9b4e7b8efec51cfc79d261fefd3 |