diff options
| -rw-r--r-- | metadata/md5-cache/sci-biology/clustal-omega-1.2.2-r1 | 14 | ||||
| -rw-r--r-- | metadata/md5-cache/sci-biology/clustal-omega-1.2.3 | 14 | ||||
| -rw-r--r-- | metadata/md5-cache/sci-biology/tophat-2.1.1-r1 | 2 | ||||
| -rw-r--r-- | metadata/md5-cache/www-client/opera-40.0.2308.62 | 13 | ||||
| -rw-r--r-- | metadata/pkg_desc_index | 4 | ||||
| -rw-r--r-- | metadata/timestamp.chk | 2 |
6 files changed, 31 insertions, 18 deletions
diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.2-r1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.2-r1 deleted file mode 100644 index 0f3a6908ef61..000000000000 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.2-r1 +++ /dev/null @@ -1,14 +0,0 @@ -DEFINED_PHASES=install prepare -DEPEND=dev-libs/argtable !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 -DESCRIPTION=Scalable multiple alignment of protein sequences -EAPI=6 -HOMEPAGE=http://www.clustal.org/omega/ -IUSE=static-libs -KEYWORDS=~amd64 ~x86 -LICENSE=GPL-2 -RDEPEND=dev-libs/argtable -SLOT=0 -SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.2.tar.gz -_eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 -_md5_=11db39eff3fe6eda29215c53ab233129 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 new file mode 100644 index 000000000000..224ca74cdac6 --- /dev/null +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.3 @@ -0,0 +1,14 @@ +DEFINED_PHASES=configure install prepare +DEPEND=dev-libs/argtable !<sys-devel/gettext-0.18.1.1-r3 || ( >=sys-devel/automake-1.15:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 +DESCRIPTION=Scalable multiple alignment of protein sequences +EAPI=6 +HOMEPAGE=http://www.clustal.org/omega/ +IUSE=static-libs +KEYWORDS=~amd64 ~x86 +LICENSE=GPL-2 +RDEPEND=dev-libs/argtable +SLOT=0 +SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.3.tar.gz +_eclass_exported_funcs=src_prepare:- src_configure:- src_install:- +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 +_md5_=3fb162adb1f5e39f50f02b54632363df diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1-r1 b/metadata/md5-cache/sci-biology/tophat-2.1.1-r1 index f9403976fe17..473d6bdf73e8 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1-r1 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1-r1 @@ -12,4 +12,4 @@ SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_configure:- src_install:- _eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils b83a2420b796f7c6eff682679d08fe25 flag-o-matic 8632fcd33a047954f007dee9a137bdcc libtool 4890219c51da247200223277f993e054 multilib 165fc17c38d1b11dac2008280dab6e80 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 6198c04daba0e1307bd844df7d37f423 -_md5_=c2671ecf4508383b7b0a8ed81e5bf31c +_md5_=b4d49e6fdb4106d0eaa41fd94e15407d diff --git a/metadata/md5-cache/www-client/opera-40.0.2308.62 b/metadata/md5-cache/www-client/opera-40.0.2308.62 new file mode 100644 index 000000000000..243aec2a8e23 --- /dev/null +++ b/metadata/md5-cache/www-client/opera-40.0.2308.62 @@ -0,0 +1,13 @@ +DEFINED_PHASES=install prepare setup unpack +DESCRIPTION=A fast and secure web browser +EAPI=5 +HOMEPAGE=http://www.opera.com/ +IUSE=+l10n_af +l10n_az +l10n_be +l10n_bg +l10n_bn +l10n_ca +l10n_cs +l10n_da +l10n_de +l10n_el +l10n_en-GB +l10n_es-419 +l10n_es +l10n_fil +l10n_fi +l10n_fr-CA +l10n_fr +l10n_fy +l10n_gd +l10n_he +l10n_hi +l10n_hr +l10n_hu +l10n_id +l10n_it +l10n_ja +l10n_kk +l10n_ko +l10n_lt +l10n_lv +l10n_mk +l10n_ms +l10n_nb +l10n_nl +l10n_nn +l10n_pa +l10n_pl +l10n_pt-BR +l10n_pt-PT +l10n_ro +l10n_ru +l10n_sk +l10n_sr +l10n_sr-ME +l10n_sv +l10n_sw +l10n_ta +l10n_te +l10n_th +l10n_tr +l10n_uk +l10n_uz +l10n_vi +l10n_zh-CN +l10n_zh-TW +l10n_zu +KEYWORDS=~amd64 ~x86 +LICENSE=OPERA-2014 +RDEPEND=dev-libs/expat dev-libs/glib:2 dev-libs/nspr dev-libs/nss >=dev-libs/openssl-1.0.1:0 gnome-base/gconf:2 media-libs/alsa-lib media-libs/fontconfig media-libs/freetype net-misc/curl net-print/cups sys-apps/dbus sys-libs/libcap x11-libs/cairo x11-libs/gdk-pixbuf x11-libs/gtk+:2 x11-libs/libX11 x11-libs/libXScrnSaver x11-libs/libXcomposite x11-libs/libXcursor x11-libs/libXdamage x11-libs/libXext x11-libs/libXfixes x11-libs/libXi x11-libs/libXrandr x11-libs/libXrender x11-libs/libXtst x11-libs/libnotify x11-libs/pango[X] +SLOT=0 +SRC_URI=amd64? ( http://get.geo.opera.com/pub/opera/desktop/40.0.2308.62/linux/opera-stable_40.0.2308.62_amd64.deb ) x86? ( http://get.geo.opera.com/pub/opera/desktop/40.0.2308.62/linux/opera-stable_40.0.2308.62_i386.deb ) +_eclass_exported_funcs=pkg_setup:linux-info src_unpack:- src_prepare:- src_install:- +_eclasses_=chromium-2 c30f482b868782938c772c21d9ede135 eutils b83a2420b796f7c6eff682679d08fe25 linux-info fd1e29abbb02cbc49f1a14299846e9c4 multilib 165fc17c38d1b11dac2008280dab6e80 toolchain-funcs 6198c04daba0e1307bd844df7d37f423 unpacker 45d07319df5f40ee6af58418b0f930be versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_md5_=1ca1ef8224ba75279b879183052f0723 diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index index 8d75cd1a0620..cf3b493ce012 100644 --- a/metadata/pkg_desc_index +++ b/metadata/pkg_desc_index @@ -15571,7 +15571,7 @@ sci-biology/blossoc 1.4.0: A linkage disequilibrium association mapping tool sci-biology/bowtie 1.1.2 1.1.2-r1 2.2.6 2.2.9: Popular short read aligner for Next-generation sequencing data sci-biology/bwa 0.7.12 0.7.15: Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner sci-biology/cd-hit 4.5.1 4.5.4 4.6: Clustering Database at High Identity with Tolerance -sci-biology/clustal-omega 1.2.1 1.2.2-r1: Scalable multiple alignment of protein sequences +sci-biology/clustal-omega 1.2.1 1.2.3: Scalable multiple alignment of protein sequences sci-biology/clustalw 1.83-r3 2.1: General purpose multiple alignment program for DNA and proteins sci-biology/clustalw-mpi 0.13-r1: A parallel (MPI) implemention of the Clustal-W general purpose multiple alignment algorithm sci-biology/clustalx 2.1-r1: Graphical interface for the ClustalW multiple alignment program @@ -17967,7 +17967,7 @@ www-client/lynx 2.8.8_p2 2.8.9_pre4 2.8.9_pre6 2.8.9_pre9: An excellent console- www-client/midori 0.5.11-r2: A lightweight web browser based on WebKitGTK+ www-client/netrik 1.16.1-r1: A text based web browser with no ssl support www-client/netsurf 3.4 3.5: a free, open source web browser -www-client/opera 12.16_p1860-r1 39.0.2256.71 40.0.2308.54: A fast and secure web browser +www-client/opera 12.16_p1860-r1 39.0.2256.71 40.0.2308.54 40.0.2308.62: A fast and secure web browser www-client/opera-beta 40.0.2308.44 40.0.2308.52: A fast and secure web browser www-client/opera-developer 41.0.2340.0 41.0.2349.0: A fast and secure web browser www-client/otter 0.9.09 0.9.10 9999: Project aiming to recreate classic Opera (12.x) UI using Qt5 diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk index a69a73a9643d..157da607a630 100644 --- a/metadata/timestamp.chk +++ b/metadata/timestamp.chk @@ -1 +1 @@ -Thu, 22 Sep 2016 06:50:18 +0000 +Thu, 22 Sep 2016 07:54:42 +0000 |