diff options
22 files changed, 37 insertions, 172 deletions
diff --git a/metadata/md5-cache/dev-db/percona-xtrabackup-8.0.26.18 b/metadata/md5-cache/dev-db/percona-xtrabackup-8.0.26.18 index 0305d3f0a5be..a9c7797b3c6e 100644 --- a/metadata/md5-cache/dev-db/percona-xtrabackup-8.0.26.18 +++ b/metadata/md5-cache/dev-db/percona-xtrabackup-8.0.26.18 @@ -5,10 +5,10 @@ DESCRIPTION=Hot backup utility for MySQL based servers EAPI=7 HOMEPAGE=https://www.percona.com/software/mysql-database/percona-xtrabackup INHERIT=cmake flag-o-matic -KEYWORDS=~amd64 ~x86 +KEYWORDS=amd64 ~x86 LICENSE=GPL-2 RDEPEND=app-arch/lz4:0= app-editors/vim-core dev-libs/icu:= dev-libs/libaio dev-libs/libedit dev-libs/libev dev-libs/libevent:0= dev-libs/libgcrypt:0= dev-libs/libgpg-error dev-libs/openssl:0= dev-libs/protobuf:= dev-libs/rapidjson dev-libs/re2:= dev-python/sphinx net-misc/curl sys-libs/zlib:= !dev-db/percona-xtrabackup-bin dev-perl/DBD-mysql SLOT=0 SRC_URI=https://www.percona.com/downloads/Percona-XtraBackup-8.0/Percona-XtraBackup-8.0.26-18/source/tarball/percona-xtrabackup-8.0.26-18.tar.gz https://dl.bintray.com/boostorg/release/1.73.0/source/boost_1_73_0.tar.bz2 _eclasses_=toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 90e2b29417d53718328f3a95227137a0 -_md5_=e1869261bb8cdcd830e6bf7f3ba19fcb +_md5_=c16b4436a8848cc3eb5858373e42464a diff --git a/metadata/md5-cache/dev-lang/R-4.1.2-r1 b/metadata/md5-cache/dev-lang/R-4.1.2-r1 deleted file mode 100644 index 5364109779f2..000000000000 --- a/metadata/md5-cache/dev-lang/R-4.1.2-r1 +++ /dev/null @@ -1,17 +0,0 @@ -BDEPEND=virtual/pkgconfig doc? ( virtual/latex-base dev-texlive/texlive-fontsrecommended ) test? ( virtual/latex-base ) sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.5:1.16 ) >=sys-devel/autoconf-2.71 >=sys-devel/libtool-2.4 virtual/fortran -DEFINED_PHASES=compile configure install postinst prepare pretend setup -DEPEND=app-arch/bzip2 app-arch/xz-utils app-text/ghostscript-gpl dev-libs/libpcre2:= >=dev-libs/tre-0.8.0_p20210321[approx] net-libs/libtirpc net-misc/curl virtual/blas sys-libs/zlib[minizip] || ( sys-apps/coreutils app-misc/realpath ) cairo? ( x11-libs/cairo:=[X=] x11-libs/pango:= ) icu? ( dev-libs/icu:= ) jpeg? ( virtual/jpeg ) lapack? ( virtual/lapack ) perl? ( dev-lang/perl ) png? ( media-libs/libpng:= ) readline? ( sys-libs/readline:= ) tiff? ( media-libs/tiff:= ) tk? ( dev-lang/tk:= ) X? ( x11-libs/libXmu x11-libs/libXt x11-misc/xdg-utils ) virtual/fortran -DESCRIPTION=Language and environment for statistical computing and graphics -EAPI=8 -HOMEPAGE=https://www.r-project.org/ -INHERIT=bash-completion-r1 autotools flag-o-matic fortran-2 toolchain-funcs -IUSE=cairo doc icu java jpeg lapack lto minimal nls openmp perl png prefix profile readline test tiff tk X -KEYWORDS=amd64 arm64 ~hppa ~ia64 sparc x86 ~amd64-linux ~x86-linux -LICENSE=|| ( GPL-2 GPL-3 ) LGPL-2.1 -RDEPEND=app-arch/bzip2 app-arch/xz-utils app-text/ghostscript-gpl dev-libs/libpcre2:= >=dev-libs/tre-0.8.0_p20210321[approx] net-libs/libtirpc net-misc/curl virtual/blas sys-libs/zlib[minizip] || ( sys-apps/coreutils app-misc/realpath ) cairo? ( x11-libs/cairo:=[X=] x11-libs/pango:= ) icu? ( dev-libs/icu:= ) jpeg? ( virtual/jpeg ) lapack? ( virtual/lapack ) perl? ( dev-lang/perl ) png? ( media-libs/libpng:= ) readline? ( sys-libs/readline:= ) tiff? ( media-libs/tiff:= ) tk? ( dev-lang/tk:= ) X? ( x11-libs/libXmu x11-libs/libXt x11-misc/xdg-utils ) java? ( >=virtual/jre-1.8:* ) virtual/fortran -REQUIRED_USE=png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) ) -RESTRICT=minimal? ( test ) !test? ( test ) -SLOT=0 -SRC_URI=mirror://cran/src/base/R-4/R-4.1.2.tar.gz https://raw.githubusercontent.com/deepayan/rcompletion/78d6830e28ea90a046da79a9b4f70c39594bb6d6/bash_completion/R -> R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion -_eclasses_=toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d -_md5_=fe91ab877945b46a9b6a3574d3e5a442 diff --git a/metadata/md5-cache/dev-lang/R-4.2.0 b/metadata/md5-cache/dev-lang/R-4.2.0 index c314009dbc07..ef410c45bfcb 100644 --- a/metadata/md5-cache/dev-lang/R-4.2.0 +++ b/metadata/md5-cache/dev-lang/R-4.2.0 @@ -1,6 +1,6 @@ BDEPEND=virtual/pkgconfig doc? ( virtual/latex-base dev-texlive/texlive-fontsrecommended ) test? ( virtual/latex-base ) sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.5:1.16 ) >=sys-devel/autoconf-2.71 >=sys-devel/libtool-2.4 virtual/fortran DEFINED_PHASES=compile configure install postinst prepare pretend setup -DEPEND=app-arch/bzip2 app-arch/xz-utils app-text/ghostscript-gpl dev-libs/libpcre2:= >=dev-libs/tre-0.8.0_p20210321[approx] net-libs/libtirpc net-misc/curl virtual/blas sys-libs/zlib[minizip] || ( sys-apps/coreutils app-misc/realpath ) cairo? ( x11-libs/cairo:=[X=] x11-libs/pango:= ) icu? ( dev-libs/icu:= ) jpeg? ( virtual/jpeg ) lapack? ( virtual/lapack ) perl? ( dev-lang/perl ) png? ( media-libs/libpng:= ) readline? ( sys-libs/readline:= ) tiff? ( media-libs/tiff:= ) tk? ( dev-lang/tk:= ) X? ( x11-libs/libXmu x11-libs/libXt x11-misc/xdg-utils ) virtual/fortran +DEPEND=app-arch/bzip2 app-arch/xz-utils app-text/ghostscript-gpl dev-libs/libpcre2:= >=dev-libs/tre-0.8.0_p20210321[approx] net-libs/libtirpc net-misc/curl virtual/blas sys-libs/zlib[minizip] || ( sys-apps/coreutils app-misc/realpath ) cairo? ( x11-libs/cairo:=[X=] x11-libs/pango:= ) icu? ( dev-libs/icu:= ) jpeg? ( media-libs/libjpeg-turbo:= ) lapack? ( virtual/lapack ) perl? ( dev-lang/perl ) png? ( media-libs/libpng:= ) readline? ( sys-libs/readline:= ) tiff? ( media-libs/tiff:= ) tk? ( dev-lang/tk:= ) X? ( x11-libs/libXmu x11-libs/libXt x11-misc/xdg-utils ) virtual/fortran DESCRIPTION=Language and environment for statistical computing and graphics EAPI=8 HOMEPAGE=https://www.r-project.org/ @@ -8,10 +8,10 @@ INHERIT=bash-completion-r1 autotools flag-o-matic fortran-2 toolchain-funcs IUSE=cairo doc icu java jpeg lapack lto minimal nls openmp perl png prefix profile readline test tiff tk X KEYWORDS=amd64 arm64 ~hppa ~ia64 sparc x86 ~amd64-linux ~x86-linux LICENSE=|| ( GPL-2 GPL-3 ) LGPL-2.1 -RDEPEND=app-arch/bzip2 app-arch/xz-utils app-text/ghostscript-gpl dev-libs/libpcre2:= >=dev-libs/tre-0.8.0_p20210321[approx] net-libs/libtirpc net-misc/curl virtual/blas sys-libs/zlib[minizip] || ( sys-apps/coreutils app-misc/realpath ) cairo? ( x11-libs/cairo:=[X=] x11-libs/pango:= ) icu? ( dev-libs/icu:= ) jpeg? ( virtual/jpeg ) lapack? ( virtual/lapack ) perl? ( dev-lang/perl ) png? ( media-libs/libpng:= ) readline? ( sys-libs/readline:= ) tiff? ( media-libs/tiff:= ) tk? ( dev-lang/tk:= ) X? ( x11-libs/libXmu x11-libs/libXt x11-misc/xdg-utils ) java? ( >=virtual/jre-1.8:* ) virtual/fortran +RDEPEND=app-arch/bzip2 app-arch/xz-utils app-text/ghostscript-gpl dev-libs/libpcre2:= >=dev-libs/tre-0.8.0_p20210321[approx] net-libs/libtirpc net-misc/curl virtual/blas sys-libs/zlib[minizip] || ( sys-apps/coreutils app-misc/realpath ) cairo? ( x11-libs/cairo:=[X=] x11-libs/pango:= ) icu? ( dev-libs/icu:= ) jpeg? ( media-libs/libjpeg-turbo:= ) lapack? ( virtual/lapack ) perl? ( dev-lang/perl ) png? ( media-libs/libpng:= ) readline? ( sys-libs/readline:= ) tiff? ( media-libs/tiff:= ) tk? ( dev-lang/tk:= ) X? ( x11-libs/libXmu x11-libs/libXt x11-misc/xdg-utils ) java? ( >=virtual/jre-1.8:* ) virtual/fortran REQUIRED_USE=png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) ) RESTRICT=minimal? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://cran/src/base/R-4/R-4.2.0.tar.gz https://raw.githubusercontent.com/deepayan/rcompletion/78d6830e28ea90a046da79a9b4f70c39594bb6d6/bash_completion/R -> R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion _eclasses_=toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 bash-completion-r1 f5e7a020fd9c741740756aac61bf75ff gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d -_md5_=cf1965031d22170c375ee6bcf1ad4809 +_md5_=d979ce45be8a86041b9d3b735d2dea3e diff --git a/metadata/md5-cache/dev-libs/libsass-3.6.5 b/metadata/md5-cache/dev-libs/libsass-3.6.5 index 4e151222ffa4..b5af087d04b7 100644 --- a/metadata/md5-cache/dev-libs/libsass-3.6.5 +++ b/metadata/md5-cache/dev-libs/libsass-3.6.5 @@ -5,9 +5,9 @@ EAPI=7 HOMEPAGE=https://github.com/sass/libsass INHERIT=autotools multilib-minimal IUSE=static-libs abi_x86_32 abi_x86_64 abi_x86_x32 abi_mips_n32 abi_mips_n64 abi_mips_o32 abi_s390_32 abi_s390_64 -KEYWORDS=amd64 ~arm arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv x86 ~amd64-linux +KEYWORDS=amd64 arm arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv x86 ~amd64-linux LICENSE=MIT SLOT=0/1 SRC_URI=https://github.com/sass/libsass/archive/3.6.5.tar.gz -> libsass-3.6.5.tar.gz _eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 multibuild d26d81f242cb193d899a72bca423d0bd multilib-build 05f207909a804c9174bc39a00547d598 multilib-minimal 4b0f1857965db8869a729948d5277e0b -_md5_=1b7af987c7327a3500624573d3951a51 +_md5_=e7da1817188ded05b33f8e966f6beef6 diff --git a/metadata/md5-cache/dev-python/boto3-1.24.7 b/metadata/md5-cache/dev-python/boto3-1.24.7 index 4219284b05e2..7166f967c842 100644 --- a/metadata/md5-cache/dev-python/boto3-1.24.7 +++ b/metadata/md5-cache/dev-python/boto3-1.24.7 @@ -5,7 +5,7 @@ EAPI=8 HOMEPAGE=https://github.com/boto/boto3/ https://pypi.org/project/boto3/ INHERIT=distutils-r1 multiprocessing IUSE=doc test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 -KEYWORDS=~amd64 ~arm ~arm64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux +KEYWORDS=amd64 arm arm64 ppc ppc64 ~riscv sparc x86 ~amd64-linux ~x86-linux LICENSE=Apache-2.0 RDEPEND=>=dev-python/botocore-1.27.7[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] >=dev-python/jmespath-0.7.1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] >=dev-python/s3transfer-0.6.0[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_targets_python3_11? ( >=dev-lang/python-3.11.0_beta1-r1:3.11 ) REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 ) @@ -13,4 +13,4 @@ RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/boto/boto3/archive/1.24.7.tar.gz -> boto3-1.24.7.gh.tar.gz _eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 648fe6a039e87233d7f48da72cadb76f python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 -_md5_=50e9b19da5bcce80f05fd9be69fe0ff8 +_md5_=41a241eaa8109dc566fb225cd48f1c86 diff --git a/metadata/md5-cache/dev-python/botocore-1.27.7 b/metadata/md5-cache/dev-python/botocore-1.27.7 index d8aa03f28fc7..4720a106a268 100644 --- a/metadata/md5-cache/dev-python/botocore-1.27.7 +++ b/metadata/md5-cache/dev-python/botocore-1.27.7 @@ -5,7 +5,7 @@ EAPI=8 HOMEPAGE=https://github.com/boto/botocore/ https://pypi.org/project/botocore/ INHERIT=distutils-r1 multiprocessing IUSE=doc test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 -KEYWORDS=~amd64 ~arm ~arm64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux +KEYWORDS=amd64 arm arm64 ppc ppc64 ~riscv sparc x86 ~amd64-linux ~x86-linux LICENSE=Apache-2.0 RDEPEND=dev-python/six[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] <dev-python/jmespath-2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] dev-python/python-dateutil[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] >=dev-python/urllib3-1.25.4[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_targets_python3_11? ( >=dev-lang/python-3.11.0_beta1-r1:3.11 ) REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 ) @@ -13,4 +13,4 @@ RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://pypi/b/botocore/botocore-1.27.7.tar.gz _eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 648fe6a039e87233d7f48da72cadb76f python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 -_md5_=ee9407b3e9a7645dd37c00caade8c434 +_md5_=1a63222c0d28dfc202f55a21c053b2df diff --git a/metadata/md5-cache/dev-ruby/minitest-around-0.5.0-r1 b/metadata/md5-cache/dev-ruby/minitest-around-0.5.0-r1 index fb626b862991..ba4da854f8d4 100644 --- a/metadata/md5-cache/dev-ruby/minitest-around-0.5.0-r1 +++ b/metadata/md5-cache/dev-ruby/minitest-around-0.5.0-r1 @@ -6,7 +6,7 @@ EAPI=8 HOMEPAGE=https://github.com/splattael/minitest-around INHERIT=ruby-fakegem IUSE=test ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 test test -KEYWORDS=~amd64 ~arm ~arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 +KEYWORDS=~amd64 arm arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 LICENSE=MIT RDEPEND=ruby_targets_ruby26? ( dev-ruby/minitest:5[ruby_targets_ruby26(-)] ) ruby_targets_ruby27? ( dev-ruby/minitest:5[ruby_targets_ruby27(-)] ) ruby_targets_ruby30? ( dev-ruby/minitest:5[ruby_targets_ruby30(-)] ) ruby_targets_ruby26? ( dev-lang/ruby:2.6 ) ruby_targets_ruby27? ( dev-lang/ruby:2.7 ) ruby_targets_ruby30? ( dev-lang/ruby:3.0 ) ruby_targets_ruby26? ( virtual/rubygems[ruby_targets_ruby26(-)] ) ruby_targets_ruby27? ( virtual/rubygems[ruby_targets_ruby27(-)] ) ruby_targets_ruby30? ( virtual/rubygems[ruby_targets_ruby30(-)] ) REQUIRED_USE=|| ( ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 ) @@ -14,4 +14,4 @@ RESTRICT=!test? ( test ) !test? ( test ) !test? ( test ) SLOT=0 SRC_URI=https://rubygems.org/gems/minitest-around-0.5.0.gem _eclasses_=estack 055c42df72f76a4f45ec92b35e83cd56 multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs fd9cde67030b26e479eeadaced488253 ruby-utils 707c7b16c28e3483e51d7ec7f7b0d5ed ruby-ng 6b9d651000093b5c0463204b7aa07fef ruby-fakegem 5219a86777b162618ed386ae08bf8ce4 -_md5_=10f046b7f078a45f7e966eb7fb98ba6c +_md5_=860cec8ecf7a9f7489986a0073aee28e diff --git a/metadata/md5-cache/dev-ruby/sassc-2.4.0-r1 b/metadata/md5-cache/dev-ruby/sassc-2.4.0-r1 index 7e3e7b9322aa..7d7b327734e9 100644 --- a/metadata/md5-cache/dev-ruby/sassc-2.4.0-r1 +++ b/metadata/md5-cache/dev-ruby/sassc-2.4.0-r1 @@ -6,7 +6,7 @@ EAPI=8 HOMEPAGE=https://github.com/sass/sassc-ruby INHERIT=ruby-fakegem IUSE=test ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 doc test test -KEYWORDS=~amd64 ~arm ~arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 +KEYWORDS=~amd64 arm arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 LICENSE=MIT RDEPEND=>=dev-libs/libsass-3.6.1 ruby_targets_ruby26? ( >=dev-ruby/ffi-1.9.6[ruby_targets_ruby26(-)] ) ruby_targets_ruby27? ( >=dev-ruby/ffi-1.9.6[ruby_targets_ruby27(-)] ) ruby_targets_ruby30? ( >=dev-ruby/ffi-1.9.6[ruby_targets_ruby30(-)] ) ruby_targets_ruby26? ( dev-lang/ruby:2.6 ) ruby_targets_ruby27? ( dev-lang/ruby:2.7 ) ruby_targets_ruby30? ( dev-lang/ruby:3.0 ) ruby_targets_ruby26? ( virtual/rubygems[ruby_targets_ruby26(-)] ) ruby_targets_ruby27? ( virtual/rubygems[ruby_targets_ruby27(-)] ) ruby_targets_ruby30? ( virtual/rubygems[ruby_targets_ruby30(-)] ) REQUIRED_USE=|| ( ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 ) @@ -14,4 +14,4 @@ RESTRICT=!test? ( test ) !test? ( test ) !test? ( test ) SLOT=2 SRC_URI=https://rubygems.org/gems/sassc-2.4.0.gem _eclasses_=estack 055c42df72f76a4f45ec92b35e83cd56 multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs fd9cde67030b26e479eeadaced488253 ruby-utils 707c7b16c28e3483e51d7ec7f7b0d5ed ruby-ng 6b9d651000093b5c0463204b7aa07fef ruby-fakegem 5219a86777b162618ed386ae08bf8ce4 -_md5_=c16aaaa09f8fbf87010790cbed6482f6 +_md5_=3cbf6b4921ff993194431c93d6a4ae03 diff --git a/metadata/md5-cache/dev-ruby/slim-4.1.0-r2 b/metadata/md5-cache/dev-ruby/slim-4.1.0-r2 index ce5941bd7abd..1eedd39e2fb4 100644 --- a/metadata/md5-cache/dev-ruby/slim-4.1.0-r2 +++ b/metadata/md5-cache/dev-ruby/slim-4.1.0-r2 @@ -6,7 +6,7 @@ EAPI=8 HOMEPAGE=http://slim-lang.com/ INHERIT=ruby-fakegem IUSE=doc test ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 doc test test -KEYWORDS=~amd64 ~arm ~arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 +KEYWORDS=~amd64 arm arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 LICENSE=MIT RDEPEND=ruby_targets_ruby26? ( >=dev-ruby/tilt-2.0.6:*[ruby_targets_ruby26(-)] =dev-ruby/tilt-2.0*:*[ruby_targets_ruby26(-)] >=dev-ruby/temple-0.7.6:0.7[ruby_targets_ruby26(-)] !!<dev-ruby/slim-3.0.9-r1[ruby_targets_ruby26(-)] ) ruby_targets_ruby27? ( >=dev-ruby/tilt-2.0.6:*[ruby_targets_ruby27(-)] =dev-ruby/tilt-2.0*:*[ruby_targets_ruby27(-)] >=dev-ruby/temple-0.7.6:0.7[ruby_targets_ruby27(-)] !!<dev-ruby/slim-3.0.9-r1[ruby_targets_ruby27(-)] ) ruby_targets_ruby30? ( >=dev-ruby/tilt-2.0.6:*[ruby_targets_ruby30(-)] =dev-ruby/tilt-2.0*:*[ruby_targets_ruby30(-)] >=dev-ruby/temple-0.7.6:0.7[ruby_targets_ruby30(-)] !!<dev-ruby/slim-3.0.9-r1[ruby_targets_ruby30(-)] ) ruby_targets_ruby26? ( dev-lang/ruby:2.6 ) ruby_targets_ruby27? ( dev-lang/ruby:2.7 ) ruby_targets_ruby30? ( dev-lang/ruby:3.0 ) ruby_targets_ruby26? ( virtual/rubygems[ruby_targets_ruby26(-)] ) ruby_targets_ruby27? ( virtual/rubygems[ruby_targets_ruby27(-)] ) ruby_targets_ruby30? ( virtual/rubygems[ruby_targets_ruby30(-)] ) REQUIRED_USE=|| ( ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 ) @@ -14,4 +14,4 @@ RESTRICT=!test? ( test ) !test? ( test ) !test? ( test ) SLOT=4 SRC_URI=https://rubygems.org/gems/slim-4.1.0.gem _eclasses_=estack 055c42df72f76a4f45ec92b35e83cd56 multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs fd9cde67030b26e479eeadaced488253 ruby-utils 707c7b16c28e3483e51d7ec7f7b0d5ed ruby-ng 6b9d651000093b5c0463204b7aa07fef ruby-fakegem 5219a86777b162618ed386ae08bf8ce4 -_md5_=f2c661a55b06fdefbe2fc679bd0ce34c +_md5_=7abc023e32773abd837f1ac61025ab7b diff --git a/metadata/md5-cache/dev-ruby/test_construct-2.0.2-r1 b/metadata/md5-cache/dev-ruby/test_construct-2.0.2-r1 index cb55ae8cf3e0..70aba3ad837a 100644 --- a/metadata/md5-cache/dev-ruby/test_construct-2.0.2-r1 +++ b/metadata/md5-cache/dev-ruby/test_construct-2.0.2-r1 @@ -6,12 +6,12 @@ EAPI=8 HOMEPAGE=https://github.com/bhb/test_construct INHERIT=ruby-fakegem IUSE=ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 ruby_targets_ruby31 doc test test -KEYWORDS=~amd64 ~arm ~arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 +KEYWORDS=~amd64 arm arm64 ~hppa ~ppc ~ppc64 ~riscv ~x86 LICENSE=MIT RDEPEND=ruby_targets_ruby26? ( dev-lang/ruby:2.6 ) ruby_targets_ruby27? ( dev-lang/ruby:2.7 ) ruby_targets_ruby30? ( dev-lang/ruby:3.0 ) ruby_targets_ruby31? ( dev-lang/ruby:3.1 ) ruby_targets_ruby26? ( virtual/rubygems[ruby_targets_ruby26(-)] ) ruby_targets_ruby27? ( virtual/rubygems[ruby_targets_ruby27(-)] ) ruby_targets_ruby30? ( virtual/rubygems[ruby_targets_ruby30(-)] ) ruby_targets_ruby31? ( virtual/rubygems[ruby_targets_ruby31(-)] ) REQUIRED_USE=|| ( ruby_targets_ruby26 ruby_targets_ruby27 ruby_targets_ruby30 ruby_targets_ruby31 ) RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=https://rubygems.org/gems/test_construct-2.0.2.gem -_eclasses_=multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs fd9cde67030b26e479eeadaced488253 estack 055c42df72f76a4f45ec92b35e83cd56 ruby-utils 707c7b16c28e3483e51d7ec7f7b0d5ed ruby-ng 6b9d651000093b5c0463204b7aa07fef ruby-fakegem 5219a86777b162618ed386ae08bf8ce4 -_md5_=a9558a1c5fd03a3065f2c75704bb9b32 +_eclasses_=estack 055c42df72f76a4f45ec92b35e83cd56 multilib 4fbbbc98f236f1b43acd99476bc3cd85 toolchain-funcs fd9cde67030b26e479eeadaced488253 ruby-utils 707c7b16c28e3483e51d7ec7f7b0d5ed ruby-ng 6b9d651000093b5c0463204b7aa07fef ruby-fakegem 5219a86777b162618ed386ae08bf8ce4 +_md5_=31b6c72a51bfe23a07a45e2d8536e39f diff --git a/metadata/md5-cache/sci-biology/bcftools-1.13 b/metadata/md5-cache/sci-biology/bcftools-1.13 deleted file mode 100644 index 55b40a96ca29..000000000000 --- a/metadata/md5-cache/sci-biology/bcftools-1.13 +++ /dev/null @@ -1,16 +0,0 @@ -BDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -DEFINED_PHASES=configure prepare setup -DEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) =sci-libs/htslib-1.13*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files -EAPI=8 -HOMEPAGE=http://www.htslib.org -INHERIT=python-single-r1 -IUSE=python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 -KEYWORDS=~amd64 ~x86 -LICENSE=MIT -RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) =sci-libs/htslib-1.13*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) -SLOT=0 -SRC_URI=https://github.com/samtools/bcftools/releases/download/1.13/bcftools-1.13.tar.bz2 -_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 648fe6a039e87233d7f48da72cadb76f python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 -_md5_=a7d6aa14a25dfbfd5fa4547dea06070c diff --git a/metadata/md5-cache/sci-biology/bcftools-1.15 b/metadata/md5-cache/sci-biology/bcftools-1.15 deleted file mode 100644 index a7109396f45c..000000000000 --- a/metadata/md5-cache/sci-biology/bcftools-1.15 +++ /dev/null @@ -1,16 +0,0 @@ -BDEPEND=python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -DEFINED_PHASES=configure prepare setup -DEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) =sci-libs/htslib-1.15*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files -EAPI=8 -HOMEPAGE=http://www.htslib.org -INHERIT=python-single-r1 -IUSE=python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 -KEYWORDS=~amd64 ~x86 -LICENSE=MIT -RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[python_targets_python3_8(-)] ) python_single_target_python3_9? ( dev-python/matplotlib[python_targets_python3_9(-)] ) python_single_target_python3_10? ( dev-python/matplotlib[python_targets_python3_10(-)] ) =sci-libs/htslib-1.15*:= sys-libs/zlib python_single_target_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_single_target_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_single_target_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 python_single_target_python3_10 ) -SLOT=0 -SRC_URI=https://github.com/samtools/bcftools/releases/download/1.15/bcftools-1.15.tar.bz2 -_eclasses_=multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 648fe6a039e87233d7f48da72cadb76f python-single-r1 a5747fe6dc0651d95cb78eddd5e160a8 -_md5_=2b2091a43195aec58a417e5334bfa2fc diff --git a/metadata/md5-cache/sci-biology/pysam-0.17.0 b/metadata/md5-cache/sci-biology/pysam-0.17.0 deleted file mode 100644 index d7679eae145f..000000000000 --- a/metadata/md5-cache/sci-biology/pysam-0.17.0 +++ /dev/null @@ -1,17 +0,0 @@ -BDEPEND=test? ( =sci-biology/bcftools-1.13* =sci-biology/samtools-1.13* ) test? ( =sci-libs/htslib-1.13*:= >=dev-python/pytest-7.0.1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] ) python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] -DEFINED_PHASES=compile configure install prepare test -DEPEND==sci-libs/htslib-1.13*:= dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/setuptools[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] -DESCRIPTION=Python interface for the SAM/BAM sequence alignment and mapping format -EAPI=8 -HOMEPAGE=https://github.com/pysam-developers/pysam https://pypi.org/project/pysam/ -INHERIT=distutils-r1 -IUSE=test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 -KEYWORDS=~amd64 ~x86 -LICENSE=MIT -RDEPEND==sci-libs/htslib-1.13*:= python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 ) -RESTRICT=!test? ( test ) -SLOT=0 -SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.17.0.tar.gz -> pysam-0.17.0.tar.gz -_eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 648fe6a039e87233d7f48da72cadb76f python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 -_md5_=5afaf93aeaee2506b60aa22aac9b3a2c diff --git a/metadata/md5-cache/sci-biology/pysam-0.19.1 b/metadata/md5-cache/sci-biology/pysam-0.19.1 index df260255d87d..9531f89a3d9a 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.19.1 +++ b/metadata/md5-cache/sci-biology/pysam-0.19.1 @@ -1,17 +1,17 @@ -BDEPEND=test? ( =sci-biology/bcftools-1.15.1* =sci-biology/samtools-1.15.1* ) test? ( =sci-libs/htslib-1.15.1*:= >=dev-python/pytest-7.0.1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] ) python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] +BDEPEND=test? ( =sci-biology/bcftools-1.15.1* =sci-biology/samtools-1.15.1* ) test? ( =sci-libs/htslib-1.15.1*:= >=dev-python/pytest-7.0.1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] ) python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_targets_python3_11? ( >=dev-lang/python-3.11.0_beta1-r1:3.11 ) >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] DEFINED_PHASES=compile configure install prepare test -DEPEND==sci-libs/htslib-1.15.1*:= dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/setuptools[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] +DEPEND==sci-libs/htslib-1.15.1*:= dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] dev-python/setuptools[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?,python_targets_python3_11(-)?] DESCRIPTION=Python interface for the SAM/BAM sequence alignment and mapping format EAPI=8 HOMEPAGE=https://github.com/pysam-developers/pysam https://pypi.org/project/pysam/ INHERIT=distutils-r1 -IUSE=test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 +IUSE=test python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 KEYWORDS=~amd64 ~x86 LICENSE=MIT -RDEPEND==sci-libs/htslib-1.15.1*:= python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) -REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 ) +RDEPEND==sci-libs/htslib-1.15.1*:= python_targets_python3_8? ( >=dev-lang/python-3.8.12_p1-r1:3.8 ) python_targets_python3_9? ( >=dev-lang/python-3.9.9-r1:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.0_p1-r1:3.10 ) python_targets_python3_11? ( >=dev-lang/python-3.11.0_beta1-r1:3.11 ) +REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 python_targets_python3_11 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.19.1.tar.gz -> pysam-0.19.1.gh.tar.gz _eclasses_=multibuild d26d81f242cb193d899a72bca423d0bd multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 python-utils-r1 648fe6a039e87233d7f48da72cadb76f python-r1 e2883e4f04f0503cdf7f2954e2bf5e15 distutils-r1 10a93585889c3ca7651cbcd2ee831e47 -_md5_=6abe0e48c82ed861430be9c31b6dd481 +_md5_=baed35c86cd8709cd139815786cd17ac diff --git a/metadata/md5-cache/sci-biology/samtools-1.13 b/metadata/md5-cache/sci-biology/samtools-1.13 deleted file mode 100644 index 9c636da8622d..000000000000 --- a/metadata/md5-cache/sci-biology/samtools-1.13 +++ /dev/null @@ -1,14 +0,0 @@ -BDEPEND=virtual/pkgconfig -DEFINED_PHASES=compile configure install prepare -DEPEND=dev-lang/perl =sci-libs/htslib-1.13*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib -DESCRIPTION=Utilities for analysing and manipulating the SAM/BAM alignment formats -EAPI=8 -HOMEPAGE=http://www.htslib.org/ -INHERIT=toolchain-funcs -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos -LICENSE=MIT -RDEPEND=dev-lang/perl =sci-libs/htslib-1.13*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib -SLOT=0 -SRC_URI=mirror://sourceforge/samtools/samtools-1.13.tar.bz2 -_eclasses_=toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 -_md5_=1319bb15b069d25fce506452f0b3a88f diff --git a/metadata/md5-cache/sci-biology/samtools-1.15 b/metadata/md5-cache/sci-biology/samtools-1.15 deleted file mode 100644 index 9e8c34d3516e..000000000000 --- a/metadata/md5-cache/sci-biology/samtools-1.15 +++ /dev/null @@ -1,14 +0,0 @@ -BDEPEND=virtual/pkgconfig -DEFINED_PHASES=compile configure install prepare -DEPEND=dev-lang/perl =sci-libs/htslib-1.15*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib -DESCRIPTION=Utilities for analysing and manipulating the SAM/BAM alignment formats -EAPI=8 -HOMEPAGE=http://www.htslib.org/ -INHERIT=toolchain-funcs -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos -LICENSE=MIT -RDEPEND=dev-lang/perl =sci-libs/htslib-1.15*:= sys-libs/ncurses:=[unicode(+)] sys-libs/zlib -SLOT=0 -SRC_URI=mirror://sourceforge/samtools/samtools-1.15.tar.bz2 -_eclasses_=toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 -_md5_=8e65ef700f1f60118807cb5e9e36a185 diff --git a/metadata/md5-cache/sci-libs/htslib-1.13 b/metadata/md5-cache/sci-libs/htslib-1.13 deleted file mode 100644 index f56c32c93128..000000000000 --- a/metadata/md5-cache/sci-libs/htslib-1.13 +++ /dev/null @@ -1,14 +0,0 @@ -DEFINED_PHASES=compile configure install prepare -DEPEND=sys-libs/zlib bzip2? ( app-arch/bzip2 ) curl? ( net-misc/curl ) lzma? ( app-arch/xz-utils ) -DESCRIPTION=C library for high-throughput sequencing data formats -EAPI=8 -HOMEPAGE=http://www.htslib.org/ -INHERIT=toolchain-funcs -IUSE=+bzip2 curl +lzma -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux -LICENSE=MIT -RDEPEND=sys-libs/zlib bzip2? ( app-arch/bzip2 ) curl? ( net-misc/curl ) lzma? ( app-arch/xz-utils ) -SLOT=0/3 -SRC_URI=mirror://sourceforge/samtools/1.13/htslib-1.13.tar.bz2 -_eclasses_=toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 -_md5_=6c78bdc9a2435a087d0e661b4bb4ea8e diff --git a/metadata/md5-cache/sci-libs/htslib-1.15 b/metadata/md5-cache/sci-libs/htslib-1.15 deleted file mode 100644 index deda1ac280d8..000000000000 --- a/metadata/md5-cache/sci-libs/htslib-1.15 +++ /dev/null @@ -1,14 +0,0 @@ -DEFINED_PHASES=compile configure install prepare -DEPEND=sys-libs/zlib bzip2? ( app-arch/bzip2 ) curl? ( net-misc/curl ) lzma? ( app-arch/xz-utils ) -DESCRIPTION=C library for high-throughput sequencing data formats -EAPI=8 -HOMEPAGE=http://www.htslib.org/ -INHERIT=toolchain-funcs -IUSE=+bzip2 curl +lzma -KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux -LICENSE=MIT -RDEPEND=sys-libs/zlib bzip2? ( app-arch/bzip2 ) curl? ( net-misc/curl ) lzma? ( app-arch/xz-utils ) -SLOT=0/3 -SRC_URI=mirror://sourceforge/samtools/1.15/htslib-1.15.tar.bz2 -_eclasses_=toolchain-funcs fd9cde67030b26e479eeadaced488253 multilib 4fbbbc98f236f1b43acd99476bc3cd85 -_md5_=90275b521abf89b977a9f97ebb76fef3 diff --git a/metadata/md5-cache/sys-devel/autoconf-2.13-r1 b/metadata/md5-cache/sys-devel/autoconf-2.13-r2 index f7fb42f3624b..03d20e727527 100644 --- a/metadata/md5-cache/sys-devel/autoconf-2.13-r1 +++ b/metadata/md5-cache/sys-devel/autoconf-2.13-r2 @@ -1,13 +1,13 @@ +BDEPEND=sys-devel/m4 dev-lang/perl DEFINED_PHASES=configure install prepare -DEPEND=>=sys-apps/texinfo-4.3 =sys-devel/m4-1.4* dev-lang/perl DESCRIPTION=Used to create autoconfiguration files -EAPI=6 +EAPI=7 HOMEPAGE=https://www.gnu.org/software/autoconf/autoconf.html INHERIT=toolchain-autoconf KEYWORDS=~alpha amd64 arm arm64 hppa ~ia64 ~loong ~m68k ~mips ppc ppc64 ~riscv ~s390 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~x64-solaris ~x86-solaris LICENSE=GPL-2 -RDEPEND=>=sys-apps/texinfo-4.3 =sys-devel/m4-1.4* dev-lang/perl >=sys-devel/autoconf-wrapper-13 +RDEPEND=sys-devel/m4 dev-lang/perl sys-apps/texinfo >=sys-devel/autoconf-wrapper-13 SLOT=2.1 SRC_URI=mirror://gnu/autoconf/autoconf-2.13.tar.gz _eclasses_=toolchain-autoconf c85a87c2280cd1204e1433d3e1123e41 -_md5_=a10dbdfeb95c13b740c8ea2e31a48a2e +_md5_=692fac576edfdad3293edd0c40cae730 diff --git a/metadata/md5-cache/sys-devel/autoconf-2.64-r1 b/metadata/md5-cache/sys-devel/autoconf-2.64-r1 deleted file mode 100644 index 7b64a1ccbb8b..000000000000 --- a/metadata/md5-cache/sys-devel/autoconf-2.64-r1 +++ /dev/null @@ -1,13 +0,0 @@ -DEFINED_PHASES=configure install prepare -DEPEND=>=sys-devel/m4-1.4.6 dev-lang/perl -DESCRIPTION=Used to create autoconfiguration files -EAPI=6 -HOMEPAGE=https://www.gnu.org/software/autoconf/autoconf.html -INHERIT=toolchain-autoconf -KEYWORDS=~alpha amd64 arm arm64 hppa ~ia64 ~m68k ~mips ppc ppc64 ~riscv ~s390 sparc x86 -LICENSE=GPL-2 -RDEPEND=>=sys-devel/m4-1.4.6 dev-lang/perl !~sys-devel/autoconf-2.64:2.5 >=sys-devel/autoconf-wrapper-13 -SLOT=2.64 -SRC_URI=mirror://gnu/autoconf/autoconf-2.64.tar.xz -_eclasses_=toolchain-autoconf c85a87c2280cd1204e1433d3e1123e41 -_md5_=d7ff612d7913ccb5ce79dacaf813e41b diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index index 97e9f455cb77..803a1e2b8265 100644 --- a/metadata/pkg_desc_index +++ b/metadata/pkg_desc_index @@ -5437,7 +5437,7 @@ dev-java/xpp3 1.1.4c-r6: An implementation of XMLPULL V1 API dev-java/xsdlib 20090415-r1: Sun XML Datatypes Library dev-java/xz-java 1.9: Implementation of xz data compression in pure java dev-java/zstd-jni 1.5.0.4: JNI bindings for Zstd native library -dev-lang/R 4.1.2-r1 4.2.0: Language and environment for statistical computing and graphics +dev-lang/R 4.2.0: Language and environment for statistical computing and graphics dev-lang/abs 2.6.0: The ABS programing language dev-lang/ammonite-repl-bin 2.5.3 2.5.4: Scala language-based scripting and REPL dev-lang/arc 3.2: New dialect of Lisp, works well for web applications @@ -16382,7 +16382,7 @@ sci-biology/abyss 2.3.4: Assembly By Short Sequences - a de novo, parallel, pair sci-biology/amap 2.2-r4: Protein multiple-alignment-based sequence annealing sci-biology/augustus 2.5.5 3.4.0-r1: Eukaryotic gene predictor sci-biology/bamtools 2.5.2 9999: A programmer's API and an end-user's toolkit for handling BAM files -sci-biology/bcftools 1.13 1.15 1.15.1: Utilities for variant calling and manipulating VCF and BCF files +sci-biology/bcftools 1.15.1: Utilities for variant calling and manipulating VCF and BCF files sci-biology/bedtools 2.30.0: Tools for manipulation and analysis of BED, GFF/GTF, VCF, SAM/BAM file formats sci-biology/bfast 0.7.0a: Blat-like Fast Accurate Search Tool sci-biology/biogrep 1.0-r2: Multithreaded tool for matching large sets of patterns against biosequence DBs @@ -16469,13 +16469,13 @@ sci-biology/probcons 1.12-r1: Probabilistic Consistency-based Multiple Alignment sci-biology/prodigal 2.6.3: Prokaryotic Dynamic Programming Genefinding Algorithm sci-biology/profphd 1.0.40: Secondary structure and solvent accessibility predictor sci-biology/prosite 2017.02: A protein families and domains database -sci-biology/pysam 0.17.0 0.19.1: Python interface for the SAM/BAM sequence alignment and mapping format +sci-biology/pysam 0.19.1: Python interface for the SAM/BAM sequence alignment and mapping format sci-biology/qrna 2.0.3c-r3: Prototype ncRNA genefinder sci-biology/raxml 7.2.6: Sequential, Parallel & Distributed Inference of Large Phylogenetic Trees sci-biology/rebase 1901: A restriction enzyme database sci-biology/recon 1.08: Automated de novo identification of repeat families from genomic sequences sci-biology/rnaview 20040713-r4: Generates 2D displays of RNA/DNA secondary structures with tertiary interactions -sci-biology/samtools 0.1.20-r4 1.13 1.15 1.15.1: Utilities for analysing and manipulating the SAM/BAM alignment formats +sci-biology/samtools 0.1.20-r4 1.15.1: Utilities for analysing and manipulating the SAM/BAM alignment formats sci-biology/seaview 4.6-r1: A graphical multiple sequence alignment editor sci-biology/seqan 2.4.0-r1 3.1.0: C++ Sequence Analysis Library sci-biology/sibsim4 0.20: A rewrite and improvement upon sim4, a DNA-mRNA aligner @@ -16797,7 +16797,7 @@ sci-libs/hipBLAS 4.3.0 5.0.2: ROCm BLAS marshalling library sci-libs/hipCUB 4.0.0-r1 4.3.0-r1 5.0.2: Wrapper of rocPRIM or CUB for GPU parallel primitives sci-libs/hipFFT 4.3.0 5.0.2: CU / ROCM agnostic hip FFT implementation sci-libs/hipSPARSE 4.0.0-r2 4.3.0-r2 5.0.2: ROCm SPARSE marshalling library -sci-libs/htslib 1.13 1.15 1.15.1: C library for high-throughput sequencing data formats +sci-libs/htslib 1.15.1: C library for high-throughput sequencing data formats sci-libs/hypre 2.20.0 2.21.0 2.24.0: Parallel matrix preconditioners library sci-libs/idlcoyote 20161220 99999999: GDL library from D. Fannings IDL courses sci-libs/idlmarkwardt 20160319: Craig Markwardt IDL procedures (MPFIT, CMSVLIB, etc) @@ -17984,7 +17984,7 @@ sys-cluster/wulfware 2.6.0: Applications to monitor on a beowulf- or GRID-style sys-cluster/zetcd 0.0.4-r2: A ZooKeeper personality for etcd sys-cluster/zookeeper-bin 3.7.1 3.8.0: A high-performance coordination service for distributed applications sys-cluster/zookeepercli 1.0.12: Simple, lightweight, dependable CLI for ZooKeeper -sys-devel/autoconf 2.13-r1 2.64-r1 2.69-r5 2.71-r1 9999: Used to create autoconfiguration files +sys-devel/autoconf 2.13-r2 2.69-r5 2.71-r1 9999: Used to create autoconfiguration files sys-devel/autoconf-archive 2021.02.19 2021.02.19-r1 2022.02.11: GNU Autoconf Macro Archive sys-devel/autoconf-wrapper 15 20220130: wrapper for autoconf to manage multiple autoconf versions sys-devel/autogen 5.18.16-r1: Program and text file generation diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk index efe511a9e05a..171cd75ed421 100644 --- a/metadata/timestamp.chk +++ b/metadata/timestamp.chk @@ -1 +1 @@ -Sun, 19 Jun 2022 08:03:54 +0000 +Sun, 19 Jun 2022 08:18:53 +0000 |