2021-10-24 11:36:32 UTC

4 files changed, 5 insertions, 22 deletions

diff --git a/metadata/md5-cache/dev-python/graph-tool-9999 b/metadata/md5-cache/dev-python/graph-tool-9999
index d03c9193aca2..e7954f5209a4 100644
--- a/metadata/md5-cache/dev-python/graph-tool-9999
+++ b/metadata/md5-cache/dev-python/graph-tool-9999
@@ -2,7 +2,7 @@ BDEPEND=virtual/pkgconfig sys-devel/gnuconfig >=app-portage/elt-patches-20170815
 DEFINED_PHASES=compile configure install prepare pretend setup unpack
 DEPEND=python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) python_targets_python3_10? ( dev-lang/python:3.10 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-libs/boost-1.70:=[context,python,python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-libs/expat dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/scipy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] sci-mathematics/cgal:= dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] cairo? ( dev-cpp/cairomm:0 dev-python/pycairo[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] ) dev-cpp/sparsehash
 DESCRIPTION=An efficient python module for manipulation and statistical analysis of graphs
-EAPI=7
+EAPI=8
 HOMEPAGE=https://graph-tool.skewed.de/
 INHERIT=check-reqs python-r1 toolchain-funcs autotools git-r3
 IUSE=+cairo openmp python_targets_python3_8 python_targets_python3_9 python_targets_python3_10
@@ -11,5 +11,5 @@ PROPERTIES=live
 RDEPEND=python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) python_targets_python3_10? ( dev-lang/python:3.10 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] >=dev-libs/boost-1.70:=[context,python,python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-libs/expat dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/scipy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] sci-mathematics/cgal:= dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] cairo? ( dev-cpp/cairomm:0 dev-python/pycairo[python_targets_python3_8(-)?,python_targets_python3_9(-)?,python_targets_python3_10(-)?] )
 REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 python_targets_python3_10 )
 SLOT=0
-_eclasses_=check-reqs	bfb51de63b0462097e40436214dd43c8	multibuild	05a584848db4901c97fcd94ae7cc3a97	eapi8-dosym	cd7d420bb5be5ee079f27239ce76b8f5	multiprocessing	61c959fc55c15c00bbb1079d6a71370b	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	python-utils-r1	655fe65f186504e455c2f3116808fda8	python-r1	e574a3642f886323f18f867ecc4d91c4	gnuconfig	262062cef0ba4f22b397193da514a350	libtool	241a8f577b9781a42a7421e53448a44e	autotools	c9df06c186913b43eb211100ef5fe2cf	git-r3	cc875b0c1e9b3bdac1af0f82f3ba29da
-_md5_=e856f58e49222d94f390af9143474159
+_eclasses_=check-reqs	bfb51de63b0462097e40436214dd43c8	multibuild	05a584848db4901c97fcd94ae7cc3a97	multiprocessing	61c959fc55c15c00bbb1079d6a71370b	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	python-utils-r1	655fe65f186504e455c2f3116808fda8	python-r1	e574a3642f886323f18f867ecc4d91c4	gnuconfig	262062cef0ba4f22b397193da514a350	libtool	241a8f577b9781a42a7421e53448a44e	autotools	c9df06c186913b43eb211100ef5fe2cf	git-r3	cc875b0c1e9b3bdac1af0f82f3ba29da
+_md5_=3c991ead43d5f158e45e287b73dde15a
diff --git a/metadata/md5-cache/sci-chemistry/pymol-2.4.0-r1 b/metadata/md5-cache/sci-chemistry/pymol-2.4.0-r1
deleted file mode 100644
index b145c9658693..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-2.4.0-r1
+++ /dev/null
@@ -1,17 +0,0 @@
-BDEPEND=python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?]
-DEFINED_PHASES=compile configure install postinst postrm preinst prepare test
-DEPEND=dev-libs/msgpack[cxx] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/PyQt5[opengl,python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pmw[python_targets_python3_8(-)?,python_targets_python3_9(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) dev-util/desktop-file-utils x11-misc/shared-mime-info
-DESCRIPTION=A Python-extensible molecular graphics system
-EAPI=7
-HOMEPAGE=https://www.pymol.org/
-INHERIT=desktop optfeature flag-o-matic xdg distutils-r1
-IUSE=+netcdf web python_targets_python3_8 python_targets_python3_9
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
-LICENSE=PSF-2.2
-RDEPEND=dev-libs/msgpack[cxx] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/PyQt5[opengl,python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pmw[python_targets_python3_8(-)?,python_targets_python3_9(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) sci-chemistry/chemical-mime-data python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?]
-REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~pacho/pymol/pymol-1.8.4.0.png.xz https://github.com/schrodinger/pymol-open-source/archive/v2.4.0.tar.gz -> pymol-2.4.0.tar.gz
-_eclasses_=desktop	c0d27bf73aa08ca05b663dbd31fbef28	optfeature	30ce9dec2b8943338c9b015bd32bac6a	toolchain-funcs	9ea1c67b6f8315fdc2568abb674519aa	multilib	4b66d835ec72e021e359bb81eacfe988	edos2unix	33e347e171066657f91f8b0c72ec8773	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff	flag-o-matic	4134b5c0fb719b9161d10bdaba9e09e5	xdg-utils	27f9a2f19502b925ac117bd657aa2979	xdg	6024fbc93167fad782e2032933654857	multiprocessing	61c959fc55c15c00bbb1079d6a71370b	multibuild	05a584848db4901c97fcd94ae7cc3a97	eapi8-dosym	cd7d420bb5be5ee079f27239ce76b8f5	python-utils-r1	655fe65f186504e455c2f3116808fda8	python-r1	e574a3642f886323f18f867ecc4d91c4	distutils-r1	252d4f554e611b0af601160a9c7be049
-_md5_=7cfcb3356ddc87975cb0d589bf782adf
diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index
index 39b665664833..e490406e9a25 100644
--- a/metadata/pkg_desc_index
+++ b/metadata/pkg_desc_index
@@ -16369,7 +16369,7 @@ sci-chemistry/probe 2.13.110909: Evaluates atomic packing within or between mole
 sci-chemistry/procheck 3.5.4-r3: Checks the stereochemical quality of a protein structure
 sci-chemistry/propka 3.2.0: pKa-value prediction of ionizable groups in protein and protein-ligand complexes
 sci-chemistry/psi 3.4.0-r2: Suite for ab initio quantum chemistry computing various molecular properties
-sci-chemistry/pymol 2.4.0-r1 2.5.0: A Python-extensible molecular graphics system
+sci-chemistry/pymol 2.5.0: A Python-extensible molecular graphics system
 sci-chemistry/raster3d 3.0.6: Generation high quality raster images of proteins or other molecules
 sci-chemistry/suitename 0.3.070628: The ROC RNA Ontology nomenclature and conformer-list development
 sci-chemistry/surf 1.0: Solvent accesible Surface calculator
diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk
index 83ca40a0645b..5ba403e3cac6 100644
--- a/metadata/timestamp.chk
+++ b/metadata/timestamp.chk
@@ -1 +1 @@
-Sun, 24 Oct 2021 09:36:39 +0000
+Sun, 24 Oct 2021 11:36:32 +0000