2023-02-07 09:47:01 UTC

6 files changed, 12 insertions, 29 deletions

diff --git a/metadata/md5-cache/dev-cpp/msgpack-cxx-5.0.0 b/metadata/md5-cache/dev-cpp/msgpack-cxx-5.0.0
index 11c63b71745b..78a716dd090b 100644
--- a/metadata/md5-cache/dev-cpp/msgpack-cxx-5.0.0
+++ b/metadata/md5-cache/dev-cpp/msgpack-cxx-5.0.0
@@ -1,6 +1,6 @@
 BDEPEND=doc? ( app-doc/doxygen[dot] ) test? ( sys-libs/zlib ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5
 DEFINED_PHASES=compile configure install prepare test
-DEPEND=boost? ( dev-libs/boost[context] )
+DEPEND=boost? ( dev-libs/boost[context] ) !<dev-libs/msgpack-5.0.0
 DESCRIPTION=MessagePack for C++
 EAPI=8
 HOMEPAGE=https://msgpack.org/ https://github.com/msgpack/msgpack-c/
@@ -8,10 +8,10 @@ INHERIT=cmake
 IUSE=+boost doc examples test
 KEYWORDS=~amd64 ~arm ~arm64 ~riscv ~x86 ~amd64-linux ~x86-linux ~x64-macos
 LICENSE=Boost-1.0
-RDEPEND=boost? ( dev-libs/boost[context] )
+RDEPEND=boost? ( dev-libs/boost[context] ) !<dev-libs/msgpack-5.0.0
 REQUIRED_USE=test? ( boost )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/msgpack/msgpack-c/releases/download/cpp-5.0.0/msgpack-cxx-5.0.0.tar.gz
 _eclasses_=toolchain-funcs	9a610728b9bcca1919234cceb35a1027	multilib	5ca4e49abed8e3a2f7b56920eadee157	flag-o-matic	69394e25812406faa1f90edaf4969395	multiprocessing	b4e253ab22cef7b1085e9b67c7a3b730	ninja-utils	38c85b725d0467e51954ea921b6c104b	xdg-utils	ac0e315a3688929e34ac75b139e7349a	cmake	449b4785acace35308fe747fc939bde1
-_md5_=b868a6d57bdf138e60bc88d39324ad4d
+_md5_=9539cf3924a261fa75c00878068c94db
diff --git a/metadata/md5-cache/dev-libs/msgpack-3.3.0 b/metadata/md5-cache/dev-libs/msgpack-3.3.0-r1
index f10c39de7791..1253ec11279e 100644
--- a/metadata/md5-cache/dev-libs/msgpack-3.3.0
+++ b/metadata/md5-cache/dev-libs/msgpack-3.3.0-r1
@@ -1,6 +1,6 @@
 BDEPEND=doc? ( app-doc/doxygen[dot] ) >=dev-util/ninja-1.8.2 >=dev-util/cmake-3.20.5
 DEFINED_PHASES=compile configure install prepare test
-DEPEND=boost? ( dev-libs/boost[context,abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] ) test? ( >=dev-cpp/gtest-1.6.0-r2[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] sys-libs/zlib[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] )
+DEPEND=boost? ( dev-libs/boost[context,abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] ) !dev-cpp/msgpack-cxx test? ( >=dev-cpp/gtest-1.6.0-r2[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] sys-libs/zlib[abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] )
 DESCRIPTION=MessagePack is a binary-based efficient data interchange format
 EAPI=7
 HOMEPAGE=https://msgpack.org/ https://github.com/msgpack/msgpack-c/
@@ -8,9 +8,9 @@ INHERIT=cmake-multilib
 IUSE=boost +cxx doc examples static-libs test abi_x86_32 abi_x86_64 abi_x86_x32 abi_mips_n32 abi_mips_n64 abi_mips_o32 abi_s390_32 abi_s390_64
 KEYWORDS=amd64 ~arm arm64 ~riscv x86 ~amd64-linux ~x86-linux ~x64-macos
 LICENSE=Boost-1.0
-RDEPEND=boost? ( dev-libs/boost[context,abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] )
+RDEPEND=boost? ( dev-libs/boost[context,abi_x86_32(-)?,abi_x86_64(-)?,abi_x86_x32(-)?,abi_mips_n32(-)?,abi_mips_n64(-)?,abi_mips_o32(-)?,abi_s390_32(-)?,abi_s390_64(-)?] ) !dev-cpp/msgpack-cxx
 RESTRICT=!test? ( test )
 SLOT=0/2
 SRC_URI=https://github.com/msgpack/msgpack-c/releases/download/cpp-3.3.0/msgpack-3.3.0.tar.gz
 _eclasses_=toolchain-funcs	9a610728b9bcca1919234cceb35a1027	multilib	5ca4e49abed8e3a2f7b56920eadee157	edos2unix	33e347e171066657f91f8b0c72ec8773	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	wrapper	4a1902f969e5718126434fc35f3a0d9c	eutils	8f942ebdcf04334697649d4a0bf65a32	flag-o-matic	69394e25812406faa1f90edaf4969395	multiprocessing	b4e253ab22cef7b1085e9b67c7a3b730	ninja-utils	38c85b725d0467e51954ea921b6c104b	xdg-utils	ac0e315a3688929e34ac75b139e7349a	cmake	449b4785acace35308fe747fc939bde1	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	bddcb51b74f4a76724ff7cf8e7388869	multilib-build	e8aed98bd43dbd25694310a660ad562c	multilib-minimal	4b0f1857965db8869a729948d5277e0b	cmake-multilib	57da9a64d1575fc2b54c50c26d033561
-_md5_=b37c0d63a8f1936b06b499d043c96fa2
+_md5_=979a03ea74a6b22eae28180750ca1988
diff --git a/metadata/md5-cache/sci-chemistry/pymol-2.5.0 b/metadata/md5-cache/sci-chemistry/pymol-2.5.0
deleted file mode 100644
index 4dab8ce3f6b6..000000000000
--- a/metadata/md5-cache/sci-chemistry/pymol-2.5.0
+++ /dev/null
@@ -1,17 +0,0 @@
-BDEPEND=python_targets_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.9:3.10 )
-DEFINED_PHASES=compile configure install postinst postrm preinst prepare test
-DEPEND=dev-libs/msgpack[cxx(-)] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) dev-util/desktop-file-utils x11-misc/shared-mime-info
-DESCRIPTION=A Python-extensible molecular graphics system
-EAPI=7
-HOMEPAGE=https://www.pymol.org/
-INHERIT=desktop flag-o-matic xdg distutils-r1
-IUSE=+netcdf web python_targets_python3_9 python_targets_python3_10
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
-LICENSE=PSF-2.2
-RDEPEND=dev-libs/msgpack[cxx(-)] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) sci-chemistry/chemical-mime-data python_targets_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.9:3.10 )
-REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 )
-RESTRICT=mirror
-SLOT=0
-SRC_URI=https://dev.gentoo.org/~pacho/pymol/pymol-1.8.4.0.png.xz https://github.com/schrodinger/pymol-open-source/archive/v2.5.0.tar.gz -> pymol-2.5.0.tar.gz
-_eclasses_=desktop	7eb20ad915a0a318176d51bc2508ff5c	toolchain-funcs	9a610728b9bcca1919234cceb35a1027	multilib	5ca4e49abed8e3a2f7b56920eadee157	edos2unix	33e347e171066657f91f8b0c72ec8773	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	wrapper	4a1902f969e5718126434fc35f3a0d9c	eutils	8f942ebdcf04334697649d4a0bf65a32	flag-o-matic	69394e25812406faa1f90edaf4969395	xdg-utils	ac0e315a3688929e34ac75b139e7349a	xdg	6024fbc93167fad782e2032933654857	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	bddcb51b74f4a76724ff7cf8e7388869	multiprocessing	b4e253ab22cef7b1085e9b67c7a3b730	ninja-utils	38c85b725d0467e51954ea921b6c104b	eapi8-dosym	cd7d420bb5be5ee079f27239ce76b8f5	python-utils-r1	8d5c1c4ecef47fa1b4576a718c620d1d	python-r1	666be58f658d6b32affe30f80e39a49e	distutils-r1	dcd5f48510105eb95e550ab968147365
-_md5_=b3c48862970ed90e009b0d6f89bec676
diff --git a/metadata/md5-cache/sci-chemistry/pymol-2.5.0-r1 b/metadata/md5-cache/sci-chemistry/pymol-2.5.0-r2
index 0ed5282a8f1a..0d0c3533a48e 100644
--- a/metadata/md5-cache/sci-chemistry/pymol-2.5.0-r1
+++ b/metadata/md5-cache/sci-chemistry/pymol-2.5.0-r2
@@ -1,6 +1,6 @@
 BDEPEND=python_targets_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.9:3.10 )
 DEFINED_PHASES=compile configure install postinst postrm preinst prepare test
-DEPEND=dev-libs/msgpack[cxx(-)] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= )
+DEPEND=|| ( dev-cpp/msgpack-cxx dev-libs/msgpack[cxx(-)] ) dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= )
 DESCRIPTION=A Python-extensible molecular graphics system
 EAPI=8
 HOMEPAGE=https://www.pymol.org/
@@ -9,9 +9,9 @@ INHERIT=desktop flag-o-matic xdg distutils-r1
 IUSE=+netcdf web python_targets_python3_9 python_targets_python3_10
 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
 LICENSE=BitstreamVera BSD freedist HPND OFL public-domain UoI-NCSA
-RDEPEND=dev-libs/msgpack[cxx(-)] dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) sci-chemistry/chemical-mime-data python_targets_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.9:3.10 )
+RDEPEND=|| ( dev-cpp/msgpack-cxx dev-libs/msgpack[cxx(-)] ) dev-libs/mmtf-cpp dev-python/pyopengl[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/PyQt5[opengl,python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/numpy[python_targets_python3_9(-)?,python_targets_python3_10(-)?] dev-python/pmw[python_targets_python3_9(-)?,python_targets_python3_10(-)?] media-libs/freetype:2 media-libs/glew:0= media-libs/glm media-libs/libpng:0= media-video/mpeg-tools sys-libs/zlib netcdf? ( sci-libs/netcdf:0= ) sci-chemistry/chemical-mime-data python_targets_python3_9? ( >=dev-lang/python-3.9.16:3.9 ) python_targets_python3_10? ( >=dev-lang/python-3.10.9:3.10 )
 REQUIRED_USE=|| ( python_targets_python3_9 python_targets_python3_10 )
 SLOT=0
 SRC_URI=https://dev.gentoo.org/~pacho/pymol/pymol-1.8.4.0.png.xz https://github.com/schrodinger/pymol-open-source/archive/v2.5.0.tar.gz -> pymol-2.5.0.tar.gz
 _eclasses_=desktop	7eb20ad915a0a318176d51bc2508ff5c	toolchain-funcs	9a610728b9bcca1919234cceb35a1027	multilib	5ca4e49abed8e3a2f7b56920eadee157	flag-o-matic	69394e25812406faa1f90edaf4969395	xdg-utils	ac0e315a3688929e34ac75b139e7349a	xdg	6024fbc93167fad782e2032933654857	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	bddcb51b74f4a76724ff7cf8e7388869	multiprocessing	b4e253ab22cef7b1085e9b67c7a3b730	ninja-utils	38c85b725d0467e51954ea921b6c104b	python-utils-r1	8d5c1c4ecef47fa1b4576a718c620d1d	python-r1	666be58f658d6b32affe30f80e39a49e	distutils-r1	dcd5f48510105eb95e550ab968147365
-_md5_=d2062ddffb3a11902466929da129aa95
+_md5_=f39e6f47ef598acf182b315199f4b61e
diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index
index e8d01b835c40..a31d3161d1ab 100644
--- a/metadata/pkg_desc_index
+++ b/metadata/pkg_desc_index
@@ -5741,7 +5741,7 @@ dev-libs/modsecurity 3.0.8: Application firewall and intrusion detection
 dev-libs/mongo-c-driver 1.18.0-r1: Client library written in C for MongoDB
 dev-libs/mpc 1.2.1 1.3.1: A library for multiprecision complex arithmetic with exact rounding
 dev-libs/mpfr 4.1.0_p13-r1 4.1.1_p1 4.2.0: Library for multiple-precision floating-point computations with exact rounding
-dev-libs/msgpack 3.3.0 5.0.0: MessagePack is a binary-based efficient data interchange format
+dev-libs/msgpack 3.3.0-r1 5.0.0: MessagePack is a binary-based efficient data interchange format
 dev-libs/mxml 3.3.1: A small XML parsing library that you can use to read XML data files or strings
 dev-libs/nanomsg 1.1.5-r1: High-performance messaging interface for distributed applications
 dev-libs/ncnn 20221128-r1: High-performance neural network inference framework
@@ -15885,7 +15885,7 @@ sci-chemistry/probe 2.13.110909: Evaluates atomic packing within or between mole
 sci-chemistry/procheck 3.5.4-r3: Checks the stereochemical quality of a protein structure
 sci-chemistry/propka 3.4.0: pKa-value prediction of ionizable groups in protein and protein-ligand complexes
 sci-chemistry/psi 3.4.0-r2: Suite for ab initio quantum chemistry computing various molecular properties
-sci-chemistry/pymol 2.5.0 2.5.0-r1: A Python-extensible molecular graphics system
+sci-chemistry/pymol 2.5.0-r2: A Python-extensible molecular graphics system
 sci-chemistry/raster3d 3.0.6-r1: Generation high quality raster images of proteins or other molecules
 sci-chemistry/suitename 0.3.070628: The ROC RNA Ontology nomenclature and conformer-list development
 sci-chemistry/surf 1.0: Solvent accesible Surface calculator
diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk
index 4969dc74991d..55e80ddab72d 100644
--- a/metadata/timestamp.chk
+++ b/metadata/timestamp.chk
@@ -1 +1 @@
-Tue, 07 Feb 2023 09:32:06 +0000
+Tue, 07 Feb 2023 09:47:02 +0000