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authorRepository mirror & CI <repomirrorci@gentoo.org>2022-06-28 07:49:33 +0000
committerRepository mirror & CI <repomirrorci@gentoo.org>2022-06-28 07:49:33 +0000
commit8bfd1ac5ed5a5830274402fd837b086b892a1566 (patch)
tree699892b20eba2292f9bdbd48a5612426896a99bb /metadata/md5-cache/sci-biology
parentMerge updates from master (diff)
downloadgentoo-8bfd1ac5ed5a5830274402fd837b086b892a1566.tar.gz
gentoo-8bfd1ac5ed5a5830274402fd837b086b892a1566.tar.bz2
gentoo-8bfd1ac5ed5a5830274402fd837b086b892a1566.zip
2022-06-28 07:49:32 UTC
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-2.5.22
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-99992
-rw-r--r--metadata/md5-cache/sci-biology/cd-hit-4.6.62
-rw-r--r--metadata/md5-cache/sci-biology/consed-292
-rw-r--r--metadata/md5-cache/sci-biology/dialign2-2.2.12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/emboss-6.6.0-r22
-rw-r--r--metadata/md5-cache/sci-biology/express-1.5.12
-rw-r--r--metadata/md5-cache/sci-biology/fasta-36.3.8h-r12
-rw-r--r--metadata/md5-cache/sci-biology/fasttree-2.1.112
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-0.46.22
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.4902
-rw-r--r--metadata/md5-cache/sci-biology/mosaik-2.2.302
-rw-r--r--metadata/md5-cache/sci-biology/mothur-1.27.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/mummer-3.232
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.6982
-rw-r--r--metadata/md5-cache/sci-biology/raxml-7.2.62
-rw-r--r--metadata/md5-cache/sci-biology/seqan-2.4.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/seqan-3.1.02
-rw-r--r--metadata/md5-cache/sci-biology/treeviewx-0.5.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/uchime-4.2.402
-rw-r--r--metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r12
-rw-r--r--metadata/md5-cache/sci-biology/unafold-3.8-r12
-rw-r--r--metadata/md5-cache/sci-biology/vcftools-0.1.142
-rw-r--r--metadata/md5-cache/sci-biology/vcftools-0.1.162
-rw-r--r--metadata/md5-cache/sci-biology/velvet-1.2.102
40 files changed, 40 insertions, 40 deletions
diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2
index 3d1fbd3a5bbe..51975137d6ce 100644
--- a/metadata/md5-cache/sci-biology/bamtools-2.5.2
+++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2
@@ -10,5 +10,5 @@ LICENSE=MIT
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/2.5.2
SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
_md5_=efdfbdbf4181a018ee9965d5c16be71f
diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999
index f2fa48c145d0..5c5dbc57a897 100644
--- a/metadata/md5-cache/sci-biology/bamtools-9999
+++ b/metadata/md5-cache/sci-biology/bamtools-9999
@@ -9,5 +9,5 @@ LICENSE=MIT
PROPERTIES=live
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/9999
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d git-r3 b9ac6f96d2a88edb5b351df634dc5e53
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d git-r3 b9ac6f96d2a88edb5b351df634dc5e53
_md5_=a2299dc6ca850c1c25582656d7586681
diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
index e5eb8d5f0d96..30cb1cb555c3 100644
--- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6
+++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl
SLOT=0
SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=bbe0ae10275a73485487e08f19f4ac1b
diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29
index 3faa7fd281d5..f5aa6277e01b 100644
--- a/metadata/md5-cache/sci-biology/consed-29
+++ b/metadata/md5-cache/sci-biology/consed-29
@@ -11,5 +11,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan
RESTRICT=fetch
SLOT=0
SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=1e30f1827727dab34c75c8c026745369
diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1
index 0b8f72ba6746..c680067861d2 100644
--- a/metadata/md5-cache/sci-biology/dialign2-2.2.1
+++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=LGPL-2.1
SLOT=0
SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=3761a69a47f38308f54ae0b051361ed6
diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
index e0c3ff3b77a2..db301198e549 100644
--- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=56469e1c3bb7c4baac8ad99638b59ff0
diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
index f626c70e9839..3b9072ac0493 100644
--- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=864a13621791118f794da4601dcde749
diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
index a5fa0d9c797e..75926b9a69e0 100644
--- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=af29c98cab7134ba05c6d874e37d95dc
diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
index e0dcbbc71789..7c69f371f5c2 100644
--- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=677a5e171c80e94969c1ab9c0b55e283
diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
index 64e65c44d17d..c81d22e34bf3 100644
--- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=e0ca10c2776835b0cd20c1b0f0721a1a
diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
index 1bffa5aa91ca..d056f5de1fd2 100644
--- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=a33d45b5be798e7ebfcef8c59a300c88
diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
index f994eb1d4414..6450a74b8454 100644
--- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=95026ca22c2bacedf52a70b4428e7753
diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
index 31869544e314..02e7f00c28ea 100644
--- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=fb64fb071ec661ab550e0b33bc78b536
diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
index b3d8a0c80fcd..9b93b7a25126 100644
--- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=06b3cb4ecb53ada6b96c0f8fe91680e9
diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
index 80dd641a6a50..aa336c48810a 100644
--- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=b6d66fbfe89f6c64f635551357dc90f4
diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
index e746b5526862..61b3ee97c6fc 100644
--- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=93c762366f9cfe8fbfdffd0fdc0483d5
diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
index 51311e1213f2..12ebc4eb6aca 100644
--- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=193e23282bfd7f7751d7e37988a0ec44
diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
index c22c60ea97ca..ff5b003fd856 100644
--- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=c54138383c80476f9d515e5e2a33acaf
diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
index ad02110c88dc..9846755bcb76 100644
--- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=30ddf1c7471e11d692477ffa5a3a9956
diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
index a962777b4393..02ca26ab043a 100644
--- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a
_md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7
diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
index c0e388dbb4d3..bdeccd156277 100644
--- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
+++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
@@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci
RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 emboss-r3 ed4c0b270092039c992b771a26ca322a readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b emboss-r3 ed4c0b270092039c992b771a26ca322a readme.gentoo-r1 b776ad4b42f564c406a95c41ccb42c55
_md5_=9856dbbe227d34ba8fd5a46c30dc912f
diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1
index f3980de5efbc..2797ff7dcabb 100644
--- a/metadata/md5-cache/sci-biology/express-1.5.1
+++ b/metadata/md5-cache/sci-biology/express-1.5.1
@@ -10,5 +10,5 @@ LICENSE=Artistic
RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib
SLOT=0
SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
_md5_=b4fcbc714ea460615318f4baa4bc347a
diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
index 8b29d21608af..4f8f81686055 100644
--- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
+++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
@@ -10,5 +10,5 @@ LICENSE=fasta
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=741f3be1a17b816aabab39443236f37b
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11
index 18a449128552..5110d6cfddee 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.11
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11
@@ -10,5 +10,5 @@ LICENSE=GPL-2
REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
SLOT=0
SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
_md5_=4a94b8db43f0aadb5ece67757ccbe635
diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2
index cacf58aeaf0c..8dcca8052630 100644
--- a/metadata/md5-cache/sci-biology/kallisto-0.46.2
+++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2
@@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
_md5_=1b739cad0275e6dc5a320723611b78e9
diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490
index a63323e1ae47..b504cea0fd3d 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.490
+++ b/metadata/md5-cache/sci-biology/mafft-7.490
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
LICENSE=BSD
SLOT=0
SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=04971be2bc4044a9c136d12a7e51b23d
diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30
index 711595abab35..7832a8467d3a 100644
--- a/metadata/md5-cache/sci-biology/mosaik-2.2.30
+++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 vcs-snapshot 19dc666868420457132a7514d4621476
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b vcs-snapshot 19dc666868420457132a7514d4621476
_md5_=b275a0e18dbe85d2a2e24cebc796c134
diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
index a18198e25a6d..a12c3cb4b665 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
+++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
@@ -11,5 +11,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran
SLOT=0
SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 fortran-2 72d28c6872beb1e7cb99684b0ae4715d
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b fortran-2 72d28c6872beb1e7cb99684b0ae4715d
_md5_=2a931ea6d0536a0cb3441d235f5d2d6b
diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23
index 2bfef5a1ebd4..2383fa9b129d 100644
--- a/metadata/md5-cache/sci-biology/mummer-3.23
+++ b/metadata/md5-cache/sci-biology/mummer-3.23
@@ -9,5 +9,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh dev-lang/perl
SLOT=0
SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=c256f298b416306c1be7005e7877f7b9
diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698
index 8dc27ed66bca..04bdf4244ca1 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.698
+++ b/metadata/md5-cache/sci-biology/phylip-3.698
@@ -10,5 +10,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw !dev-lang/elixir
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=b3a777c086ea4a6cd489efcb5bde7b66
diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6
index 91aaf73283bb..f710ff6ca531 100644
--- a/metadata/md5-cache/sci-biology/raxml-7.2.6
+++ b/metadata/md5-cache/sci-biology/raxml-7.2.6
@@ -9,5 +9,5 @@ LICENSE=GPL-2
REQUIRED_USE=cpu_flags_x86_sse3
SLOT=0
SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=14b77d8b019468c10a65f1358be0d8ae
diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1
index dafb55a5d2de..c7556076a02f 100644
--- a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1
+++ b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1
@@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seq
REQUIRED_USE=cpu_flags_x86_sse4_1
SLOT=0
SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d multibuild d26d81f242cb193d899a72bca423d0bd
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d multibuild d26d81f242cb193d899a72bca423d0bd
_md5_=af3f619bf918af3c15697066b1de20bb
diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0
index 6e400e498f37..8109d46f7ec5 100644
--- a/metadata/md5-cache/sci-biology/seqan-3.1.0
+++ b/metadata/md5-cache/sci-biology/seqan-3.1.0
@@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib
REQUIRED_USE=cpu_flags_x86_sse4_2
SLOT=0
SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
_md5_=327a33751512d78b13d5acd641ba3385
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
index b6d36b98f1f5..9b71b73cb91f 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
@@ -10,5 +10,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/wxGTK:3.0[X]
SLOT=0
SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b wxwidgets c09e9b94378cadaf6ef86ec1534c0fd6
_md5_=14493f936bb599dd7faec748cece70f3
diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40
index 269e7aeb36bd..89ff3ff251ea 100644
--- a/metadata/md5-cache/sci-biology/uchime-4.2.40
+++ b/metadata/md5-cache/sci-biology/uchime-4.2.40
@@ -8,5 +8,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux
LICENSE=public-domain
SLOT=0
SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b multiprocessing b4e253ab22cef7b1085e9b67c7a3b730 ninja-utils 58ec4e54962bf45d065fb95030701514 xdg-utils fffb53a53cf17c9c0c998a3c0a590c7e cmake 44afbf15c35884f7c840470f1cf05d0d
_md5_=421c75fd545cd9d38575321e00aeab36
diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
index 5182a996db90..37e28d42c0ed 100644
--- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
+++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
@@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows
REQUIRED_USE=server? ( mysql )
SLOT=0
SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7 webapp d872f28d7595b70dd46545199ef35fb0
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b webapp d872f28d7595b70dd46545199ef35fb0
_md5_=35cb93e40ad2d78c190e860dd3944557
diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1
index 01b516649f34..ed28fc8fba15 100644
--- a/metadata/md5-cache/sci-biology/unafold-3.8-r1
+++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1
@@ -10,5 +10,5 @@ LICENSE=unafold
RDEPEND=media-libs/freeglut media-libs/gd virtual/opengl
SLOT=0
SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 edos2unix 33e347e171066657f91f8b0c72ec8773 strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=140380fdaf468f37ce9bb27d0026ec8e
diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14
index d541446a74c7..6a63aefc1589 100644
--- a/metadata/md5-cache/sci-biology/vcftools-0.1.14
+++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14
@@ -10,5 +10,5 @@ LICENSE=LGPL-3
RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack )
SLOT=0
SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz
-_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 perl-functions fea344a91ebf37efadf172c6a3de5a72
+_eclasses_=desktop 22952d8f27cac191d75529d4c38e6bfa edos2unix 33e347e171066657f91f8b0c72ec8773 estack 055c42df72f76a4f45ec92b35e83cd56 epatch 28f0f3c0226306ec5f49e13bf851f171 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 ltprune 97143780d341cc8d8f1d4c6187a36d29 preserve-libs a8e50acee31b5759b4df1f7707cae54b strip-linguas ac3ee41ee2d31d8c41a77c0838320cc7 vcs-clean d271b7bc7e6a009758d7d4ef749174e3 wrapper 4a1902f969e5718126434fc35f3a0d9c eutils dab5d8ec471d025b79c9e6906bcf3bff gnuconfig b6b3e92f8b8c996400074b5f61a59256 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b perl-functions fea344a91ebf37efadf172c6a3de5a72
_md5_=82adffd84f2a93745e683b498b79fbe8
diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16
index adf59a15ff52..3f3e5b0b2cc9 100644
--- a/metadata/md5-cache/sci-biology/vcftools-0.1.16
+++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16
@@ -11,5 +11,5 @@ LICENSE=LGPL-3
RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack )
SLOT=0
SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz
-_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a500d7cc40da3de38c361e889153bdf7 perl-functions fea344a91ebf37efadf172c6a3de5a72
+_eclasses_=gnuconfig b6b3e92f8b8c996400074b5f61a59256 toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 libtool 241a8f577b9781a42a7421e53448a44e autotools 136117fb43a9bf5598530e9cc642f710 flag-o-matic a3abd6002fafb3022597be6b8d01f88b perl-functions fea344a91ebf37efadf172c6a3de5a72
_md5_=faeb202e0aded0cb660ea87d6d7be81b
diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10
index f6af61ec7fba..e73ba9f4ffb3 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.2.10
+++ b/metadata/md5-cache/sci-biology/velvet-1.2.10
@@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz
-_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a500d7cc40da3de38c361e889153bdf7
+_eclasses_=toolchain-funcs e9da88162e7a3c60376e80c2c2adcdfb multilib 4fbbbc98f236f1b43acd99476bc3cd85 flag-o-matic a3abd6002fafb3022597be6b8d01f88b
_md5_=f48eb0348a1ac91d41dde22d3ced2ea1