2020-08-03 21:35:30 UTC

5 files changed, 0 insertions, 70 deletions

diff --git a/metadata/md5-cache/sci-biology/bcftools-1.5 b/metadata/md5-cache/sci-biology/bcftools-1.5
deleted file mode 100644
index 04d51da44ad8..000000000000
--- a/metadata/md5-cache/sci-biology/bcftools-1.5
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=configure prepare
-DEPEND=dev-lang/perl =sci-libs/htslib-1.5*:= sys-libs/zlib python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files
-EAPI=6
-HOMEPAGE=http://www.htslib.org
-IUSE=python_targets_python2_7
-KEYWORDS=~amd64 ~x86
-LICENSE=MIT
-RDEPEND=dev-lang/perl =sci-libs/htslib-1.5*:= sys-libs/zlib python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=https://github.com/samtools/bcftools/releases/download/1.5/bcftools-1.5.tar.bz2
-_eclasses_=multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=e289371e3fec376baf8fe36c652ca521
diff --git a/metadata/md5-cache/sci-biology/bcftools-1.9-r2 b/metadata/md5-cache/sci-biology/bcftools-1.9-r2
deleted file mode 100644
index 2ddee257084a..000000000000
--- a/metadata/md5-cache/sci-biology/bcftools-1.9-r2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=configure prepare setup
-DEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) =sci-libs/htslib-1.9*:= sys-libs/zlib:= python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] )
-DESCRIPTION=Utilities for variant calling and manipulating VCF and BCF files
-EAPI=7
-HOMEPAGE=http://www.htslib.org
-IUSE=python_single_target_python3_6 python_single_target_python3_7
-KEYWORDS=~amd64 ~x86
-LICENSE=MIT
-RDEPEND=dev-lang/perl python_single_target_python3_6? ( dev-python/matplotlib[python_targets_python3_6(-)] ) python_single_target_python3_7? ( dev-python/matplotlib[python_targets_python3_7(-)] ) =sci-libs/htslib-1.9*:= sys-libs/zlib:= python_single_target_python3_6? ( dev-lang/python:3.6 >=dev-lang/python-exec-2:=[python_targets_python3_6] ) python_single_target_python3_7? ( dev-lang/python:3.7 >=dev-lang/python-exec-2:=[python_targets_python3_7] )
-REQUIRED_USE=^^ ( python_single_target_python3_6 python_single_target_python3_7 )
-SLOT=0
-SRC_URI=https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2
-_eclasses_=multilib	2477ebe553d3e4d2c606191fe6c33602	python-single-r1	674c48c926cbb44e91b656e0399d8f54	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=3bd4e9294012ee3e5fdd9e07796a4cc2
diff --git a/metadata/md5-cache/sci-biology/pysam-0.12.0.1 b/metadata/md5-cache/sci-biology/pysam-0.12.0.1
deleted file mode 100644
index f21e7e53d65f..000000000000
--- a/metadata/md5-cache/sci-biology/pysam-0.12.0.1
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND==sci-libs/htslib-1.5*:= dev-python/cython[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] dev-python/setuptools[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-DESCRIPTION=Python interface for the SAM/BAM sequence alignment and mapping format
-EAPI=6
-HOMEPAGE=https://github.com/pysam-developers/pysam https://pypi.org/project/pysam/
-IUSE=python_targets_python3_6
-KEYWORDS=~amd64 ~x86
-LICENSE=MIT
-RDEPEND==sci-libs/htslib-1.5*:= python_targets_python3_6? ( dev-lang/python:3.6 ) >=dev-lang/python-exec-2:=[python_targets_python3_6(-)?,-python_single_target_python3_6(-)]
-REQUIRED_USE=|| ( python_targets_python3_6 )
-SLOT=0
-SRC_URI=mirror://pypi/p/pysam/pysam-0.12.0.1.tar.gz
-_eclasses_=desktop	7fd20552ce4cc97e8acb132a499a7dd8	distutils-r1	0dda1d9008ac0b2530588115a772d99d	epatch	ed88001f77c6dd0d5f09e45c1a5b480e	estack	686eaab303305a908fd57b2fd7617800	eutils	fcb2aa98e1948b835b5ae66ca52868c5	ltprune	2729691420b6deeda2a90b1f1183fb55	multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	multiprocessing	cac3169468f893670dac3e7cb940e045	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	ff2ff954e6b17929574eee4efc5152ba
-_md5_=73a20e2f0964572bf64b569361b1235c
diff --git a/metadata/md5-cache/sci-biology/samtools-1.5 b/metadata/md5-cache/sci-biology/samtools-1.5
deleted file mode 100644
index 10aeac929ffb..000000000000
--- a/metadata/md5-cache/sci-biology/samtools-1.5
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=install prepare test
-DEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)] virtual/pkgconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DESCRIPTION=Utilities for analysing and manipulating the SAM/BAM alignment formats
-EAPI=6
-HOMEPAGE=http://www.htslib.org/
-IUSE=examples python_targets_python2_7
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
-LICENSE=MIT
-RDEPEND=dev-lang/perl =sci-libs/htslib-1.5* sys-libs/ncurses:0= sys-libs/zlib python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_python2_7(-)]
-REQUIRED_USE=|| ( python_targets_python2_7 )
-SLOT=0
-SRC_URI=mirror://sourceforge/samtools/samtools-1.5.tar.bz2
-_eclasses_=autotools	7d999b62b8749fad43fff00620cedf47	libtool	f143db5a74ccd9ca28c1234deffede96	multibuild	b2c915190b051f55a23b9354b9849847	multilib	2477ebe553d3e4d2c606191fe6c33602	python-r1	79e26ce8f853c9daebe9a4956e37cc1b	python-utils-r1	cae3d65c47270c9a8c4880076996c09c	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=8d92b4a814f62eab87bac2be22c2470c
diff --git a/metadata/md5-cache/sci-biology/samtools-1.9-r1 b/metadata/md5-cache/sci-biology/samtools-1.9-r1
deleted file mode 100644
index 4f723329b771..000000000000
--- a/metadata/md5-cache/sci-biology/samtools-1.9-r1
+++ /dev/null
@@ -1,14 +0,0 @@
-BDEPEND=virtual/pkgconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.1:1.16 >=sys-devel/automake-1.15.1:1.15 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4
-DEFINED_PHASES=install prepare test
-DEPEND=dev-lang/perl =sci-libs/htslib-1.9* sys-libs/ncurses:0= sys-libs/zlib:=
-DESCRIPTION=Utilities for analysing and manipulating the SAM/BAM alignment formats
-EAPI=7
-HOMEPAGE=http://www.htslib.org/
-IUSE=examples
-KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
-LICENSE=MIT
-RDEPEND=dev-lang/perl =sci-libs/htslib-1.9* sys-libs/ncurses:0= sys-libs/zlib:=
-SLOT=0
-SRC_URI=mirror://sourceforge/samtools/samtools-1.9.tar.bz2
-_eclasses_=autotools	7d999b62b8749fad43fff00620cedf47	libtool	f143db5a74ccd9ca28c1234deffede96	multilib	2477ebe553d3e4d2c606191fe6c33602	toolchain-funcs	605c126bed8d87e4378d5ff1645330cb
-_md5_=e33fcb6672676516fd35c5f382d9edc1