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| author |   Michael Orlitzky <mjo@gentoo.org> | 2022-09-15 11:47:56 -0400 |
|---|---|---|
| committer | Michael Orlitzky <mjo@gentoo.org> | 2022-09-15 11:49:34 -0400 |
| commit | 6162fb237663bbe61114cf13951715c141d51bba (patch) | |
| tree | 6e90f498c1b661403fc87caf0fa5c6a01d1060c6 /dev-lang | |
| parent | sys-apps/file: add lzip support to live (diff) | |
| download | gentoo-6162fb237663bbe61114cf13951715c141d51bba.tar.gz gentoo-6162fb237663bbe61114cf13951715c141d51bba.tar.bz2 gentoo-6162fb237663bbe61114cf13951715c141d51bba.zip | |
dev-lang/R: backport a fix for a broken test.
This isn't a critical fix by any means, but otherwise we're likely to
forget to re-enable this test when R-4.2.2 comes out.
Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
Diffstat (limited to 'dev-lang')
| -rw-r--r-- | dev-lang/R/R-4.2.1.ebuild | 14 | ||||
| -rw-r--r-- | dev-lang/R/files/R-4.2.1-reg-packages-testfix.patch | 25 |
2 files changed, 30 insertions, 9 deletions
diff --git a/dev-lang/R/R-4.2.1.ebuild b/dev-lang/R/R-4.2.1.ebuild index cfb2a07ff6bc..1ee01869a453 100644 --- a/dev-lang/R/R-4.2.1.ebuild +++ b/dev-lang/R/R-4.2.1.ebuild @@ -71,10 +71,11 @@ BDEPEND=" test? ( virtual/latex-base )" PATCHES=( - "${FILESDIR}"/${PN}-3.4.1-parallel.patch - "${FILESDIR}"/${PN}-3.4.1-rmath-shared.patch - "${FILESDIR}"/${PN}-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch - "${FILESDIR}"/${PN}-3.6.2-no-gzip-doc.patch + "${FILESDIR}"/R-3.4.1-parallel.patch + "${FILESDIR}"/R-3.4.1-rmath-shared.patch + "${FILESDIR}"/R-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch + "${FILESDIR}"/R-3.6.2-no-gzip-doc.patch + "${FILESDIR}"/R-4.2.1-reg-packages-testfix.patch ) pkg_pretend() { @@ -108,11 +109,6 @@ src_prepare() { sed -e 's:\.\./manual/:manual/:g' \ -i $(grep -Flr ../manual/ doc) || die "sed for HTML links failed" - # Disable this test until it passes again, - # https://bugs.r-project.org/show_bug.cgi?id=18338 - sed -e 's/ reg-packages.R / /' \ - -i tests/Makefile.common || die - use lapack && export LAPACK_LIBS="$($(tc-getPKG_CONFIG) --libs lapack)" diff --git a/dev-lang/R/files/R-4.2.1-reg-packages-testfix.patch b/dev-lang/R/files/R-4.2.1-reg-packages-testfix.patch new file mode 100644 index 000000000000..f5fe9667ad67 --- /dev/null +++ b/dev-lang/R/files/R-4.2.1-reg-packages-testfix.patch @@ -0,0 +1,25 @@ +diff --git a/tests/reg-packages.R b/tests/reg-packages.R +index c9962ce..2d36d1e 100644 +--- a/tests/reg-packages.R ++++ b/tests/reg-packages.R +@@ -260,7 +260,8 @@ stopifnot(exprs = { + (lenN <- length(print(iN <- grep("^[1-9][0-9]:", tlines)))) >= 2 + iN - iw == seq_len(lenN) # these (3) lines come immediately after 'Warning', + ## and "related" to the some 'missing .. paren' above: +- 8 <= print(iw - i) & iw - i <= 20 # see ~14 ++ !is.na(ierr <- as.integer(substr(print(tlines[iN[1]]), 1, 2))) ++ 8 <= print(ierr - i) & ierr - i <= 14 # see 11 + }) ## failed in R <= 4.1.1 + + +@@ -495,8 +496,8 @@ checkMatrix(ap, 4) + + + ## clean up +-rmL <- c("myLib", if(has.symlink) "myLib_2", "myTst", file.path(pkgPath), +- oldpkgdir, newpkgdir, repodir, backupPfiles) ++rmL <- c("myLib", if(has.symlink) "myLib_2", "myTst", "myTst2", ++ "PR17501.Rcheck") + if(do.cleanup) { + for(nm in rmL) unlink(nm, recursive = TRUE) + } else { |